Structural analysis of the human BIN1 gene. Evidence for tissue-specific transcriptional regulation and alternate RNA splicing - PubMed (original) (raw)
. 1997 Dec 12;272(50):31453-8.
doi: 10.1074/jbc.272.50.31453.
Affiliations
- PMID: 9395479
- DOI: 10.1074/jbc.272.50.31453
Free article
Structural analysis of the human BIN1 gene. Evidence for tissue-specific transcriptional regulation and alternate RNA splicing
R Wechsler-Reya et al. J Biol Chem. 1997.
Free article
Abstract
BIN1 is a putative tumor suppressor that was identified through its interaction with the MYC oncoprotein. To begin to identify elements of BIN1 whose alteration may contribute to malignancy, we cloned and characterized the human BIN1 gene and promoter. Nineteen exons were identified in a region of >54 kilobases, six of which were alternately spliced in a cell type-specific manner. One alternately spliced exon encodes part of the MYC-binding domain, suggesting that splicing controls the MYC-binding capacity of BIN1 polypeptides. Four other alternately spliced exons encode amphiphysin-related sequences that were included in brain-specific BIN1 species, also termed amphiphysin isoforms or amphiphysin II. The 5'-flanking region of BIN1 is GC-rich and lacks a TATA box but directs transcriptional initiation from a single site. A approximately 0. 9-kilobase fragment from this region was sufficient for basal transcription and transactivation by MyoD, which may account for the high levels of BIN1 observed in skeletal muscle. This study lays the foundation for genetic and epigenetic investigations into the role of BIN1 in normal and neoplastic cell regulation.
Similar articles
- Mechanism for elimination of a tumor suppressor: aberrant splicing of a brain-specific exon causes loss of function of Bin1 in melanoma.
Ge K, DuHadaway J, Du W, Herlyn M, Rodeck U, Prendergast GC. Ge K, et al. Proc Natl Acad Sci U S A. 1999 Aug 17;96(17):9689-94. doi: 10.1073/pnas.96.17.9689. Proc Natl Acad Sci U S A. 1999. PMID: 10449755 Free PMC article. - The murine Bin1 gene functions early in myogenesis and defines a new region of synteny between mouse chromosome 18 and human chromosome 2.
Mao NC, Steingrimsson E, DuHadaway J, Wasserman W, Ruiz JC, Copeland NG, Jenkins NA, Prendergast GC. Mao NC, et al. Genomics. 1999 Feb 15;56(1):51-8. doi: 10.1006/geno.1998.5709. Genomics. 1999. PMID: 10036185 - BIN1 is a novel MYC-interacting protein with features of a tumour suppressor.
Sakamuro D, Elliott KJ, Wechsler-Reya R, Prendergast GC. Sakamuro D, et al. Nat Genet. 1996 Sep;14(1):69-77. doi: 10.1038/ng0996-69. Nat Genet. 1996. PMID: 8782822 - Cardiac BIN1 (cBIN1) is a regulator of cardiac contractile function and an emerging biomarker of heart muscle health.
Zhou K, Hong T. Zhou K, et al. Sci China Life Sci. 2017 Mar;60(3):257-263. doi: 10.1007/s11427-016-0249-x. Epub 2016 Nov 23. Sci China Life Sci. 2017. PMID: 27888388 Review. - Amphiphysin 2 (BIN1) in physiology and diseases.
Prokic I, Cowling BS, Laporte J. Prokic I, et al. J Mol Med (Berl). 2014 May;92(5):453-63. doi: 10.1007/s00109-014-1138-1. Epub 2014 Mar 5. J Mol Med (Berl). 2014. PMID: 24590001 Review.
Cited by
- Shaping transverse-tubules: central mechanisms that play a role in the cytosol zoning for muscle contraction.
Kawaguchi K, Fujita N. Kawaguchi K, et al. J Biochem. 2024 Feb 25;175(2):125-131. doi: 10.1093/jb/mvad083. J Biochem. 2024. PMID: 37848047 Free PMC article. Review. - Diet effects on colonic health influence the efficacy of Bin1 mAb immunotherapy for ulcerative colitis.
Thomas S, Dilbarov N, Kelly J, Mercogliano G, Prendergast GC. Thomas S, et al. Sci Rep. 2023 Jul 21;13(1):11802. doi: 10.1038/s41598-023-38830-2. Sci Rep. 2023. PMID: 37479833 Free PMC article. - Altered DNA methylome profiles of blood leukocytes in Chinese patients with mild cognitive impairment and Alzheimer's disease.
Wu S, Yang F, Chao S, Wang B, Wang W, Li H, Yu L, He L, Li X, Sun L, Qin S. Wu S, et al. Front Genet. 2023 Jun 14;14:1175864. doi: 10.3389/fgene.2023.1175864. eCollection 2023. Front Genet. 2023. PMID: 37388929 Free PMC article. - BIN1 in cancer: biomarker and therapeutic target.
Chen SY, Cao JL, Li KP, Wan S, Yang L. Chen SY, et al. J Cancer Res Clin Oncol. 2023 Aug;149(10):7933-7944. doi: 10.1007/s00432-023-04673-7. Epub 2023 Mar 9. J Cancer Res Clin Oncol. 2023. PMID: 36890396 Review. - Bin1 targeted immunotherapy alters the status of the enteric neurons and the microbiome during ulcerative colitis treatment.
Thomas S, Mercogliano G, Prendergast GC. Thomas S, et al. PLoS One. 2022 Nov 2;17(11):e0276910. doi: 10.1371/journal.pone.0276910. eCollection 2022. PLoS One. 2022. PMID: 36322599 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases
Miscellaneous