Structure of the guanine nucleotide exchange factor Sec7 domain of human arno and analysis of the interaction with ARF GTPase - PubMed (original) (raw)
Structure of the guanine nucleotide exchange factor Sec7 domain of human arno and analysis of the interaction with ARF GTPase
E Mossessova et al. Cell. 1998.
Free article
Abstract
Sec7-related guanine nucleotide exchange factors (GEFs) initiate vesicle budding from the Golgi membrane surface by converting the GTPase ARF to a GTP-bound, membrane-associated form. Here we report the crystal structure of the catalytic Sec7 homology domain of Arno, a human GEF for ARF1, determined at 2.2 angstroms resolution. The Sec7 domain is an elongated, all-helical protein with a distinctive hydrophobic groove that is phylogenetically conserved. Structure-based mutagenesis identifies the groove and an adjacent conserved loop as the ARF-interacting surface. The sites of Sec7 domain interaction on ARF1 have subsequently been mapped, by protein footprinting experiments, to the switch 1 and switch 2 GTPase regions, leading to a model for the interaction between ARF GTPases and Sec7 domain exchange factors.
Similar articles
- A glutamic finger in the guanine nucleotide exchange factor ARNO displaces Mg2+ and the beta-phosphate to destabilize GDP on ARF1.
Béraud-Dufour S, Robineau S, Chardin P, Paris S, Chabre M, Cherfils J, Antonny B. Béraud-Dufour S, et al. EMBO J. 1998 Jul 1;17(13):3651-9. doi: 10.1093/emboj/17.13.3651. EMBO J. 1998. PMID: 9649435 Free PMC article. - ARNO3, a Sec7-domain guanine nucleotide exchange factor for ADP ribosylation factor 1, is involved in the control of Golgi structure and function.
Franco M, Boretto J, Robineau S, Monier S, Goud B, Chardin P, Chavrier P. Franco M, et al. Proc Natl Acad Sci U S A. 1998 Aug 18;95(17):9926-31. doi: 10.1073/pnas.95.17.9926. Proc Natl Acad Sci U S A. 1998. PMID: 9707577 Free PMC article. - Structure of the Sec7 domain of the Arf exchange factor ARNO.
Cherfils J, Ménétrey J, Mathieu M, Le Bras G, Robineau S, Béraud-Dufour S, Antonny B, Chardin P. Cherfils J, et al. Nature. 1998 Mar 5;392(6671):101-5. doi: 10.1038/32210. Nature. 1998. PMID: 9510256 - The role of ADP-ribosylation factor and SAR1 in vesicular trafficking in plants.
Memon AR. Memon AR. Biochim Biophys Acta. 2004 Jul 1;1664(1):9-30. doi: 10.1016/j.bbamem.2004.04.005. Biochim Biophys Acta. 2004. PMID: 15238254 Review. - Activation of toxin ADP-ribosyltransferases by eukaryotic ADP-ribosylation factors.
Moss J, Vaughan M. Moss J, et al. Mol Cell Biochem. 1999 Mar;193(1-2):153-7. Mol Cell Biochem. 1999. PMID: 10331652 Review.
Cited by
- Systematic structure-function analysis of the small GTPase Arf1 in yeast.
Click ES, Stearns T, Botstein D. Click ES, et al. Mol Biol Cell. 2002 May;13(5):1652-64. doi: 10.1091/mbc.02-01-0007. Mol Biol Cell. 2002. PMID: 12006660 Free PMC article. - Small GTPase ARF6 controls VEGFR2 trafficking and signaling in diabetic retinopathy.
Zhu W, Shi DS, Winter JM, Rich BE, Tong Z, Sorensen LK, Zhao H, Huang Y, Tai Z, Mleynek TM, Yoo JH, Dunn C, Ling J, Bergquist JA, Richards JR, Jiang A, Lesniewski LA, Hartnett ME, Ward DM, Mueller AL, Ostanin K, Thomas KR, Odelberg SJ, Li DY. Zhu W, et al. J Clin Invest. 2017 Dec 1;127(12):4569-4582. doi: 10.1172/JCI91770. Epub 2017 Oct 23. J Clin Invest. 2017. PMID: 29058688 Free PMC article. - Biochemical methods for studying kinetic regulation of Arf1 activation by Sec7.
Richardson BC, Fromme JC. Richardson BC, et al. Methods Cell Biol. 2015;130:101-26. doi: 10.1016/bs.mcb.2015.03.020. Epub 2015 Jun 11. Methods Cell Biol. 2015. PMID: 26360031 Free PMC article. - A Systematic In-silico Analysis of Helicobacter pylori Pathogenic Islands for Identification of Novel Drug Target Candidates.
Nammi D, Yarla NS, Chubarev VN, Tarasov VV, Barreto GE, Pasupulati AMC, Aliev G, Neelapu NRR. Nammi D, et al. Curr Genomics. 2017 Oct;18(5):450-465. doi: 10.2174/1389202918666170705160615. Curr Genomics. 2017. PMID: 29081700 Free PMC article. - Evolution and conservation of JmjC domain proteins in the green lineage.
Huang Y, Chen D, Liu C, Shen W, Ruan Y. Huang Y, et al. Mol Genet Genomics. 2016 Feb;291(1):33-49. doi: 10.1007/s00438-015-1089-4. Epub 2015 Jul 8. Mol Genet Genomics. 2016. PMID: 26152513
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases