Quantitative features for mass spectrometry data (original) (raw)

Project Status: Active – The project has reached a stable, usable state and is being actively developed. R-CMD-check-bioc codecov.io license

What is QFeatures?

QFeatures is a Bioconductor package that provides infrastructure to management and process quantitative features for high-throughput mass spectrometry-based proteomics assays. It provides a familiar Bioconductor user experience to manage quantitative data across different assay levels (such as precursors, peptide spectrum matches, peptides and proteins or protein groups) in a coherent and tractable format.

If you are familiar with the MSnbase package, QFeatures could be summarised with:

Evolving MSnSet data towards SummarizedExperiment, but for proteomics data.

License

The QFeatures code is provided under a permissive Artistic 2.0 license. The documentation, including the manual pages and the vignettes, are distributed under a CC BY-SA license.