Lucie Novoveska | The Scottish Association for Marine Science (original) (raw)

Papers by Lucie Novoveska

Zenodo (CERN European Organization for Nuclear Research), Mar 31, 2023

Journal of Phycology, Jun 13, 2018

Dunaliella, a commercially important chlorophyte, is globally distributed in saline habitats. Mor... more Dunaliella, a commercially important chlorophyte, is globally distributed in saline habitats. Morphological species have not been definitively reconciled with phylogenetic analyses. Considerable genetic diversity continues to be discovered in new isolates, especially from soil and benthic habitats. Twenty-nine new isolates from Great Salt Lake, Utah, many from benthic or supralittoral habitats, were phylogenetically analyzed using ITS1+5.8S+ITS2 in comparison to a broad sampling of available sequences. A few new isolates align in one branch of a bifurcated monophyletic Dunaliella salina clade and several cluster within monophyletic D. viridis. Several others align with relatively few unnamed strains from other locations, comprising a diverse clade that may represent two or more new species. The overall Dunaliella clade is relatively robust, but the nearest outgroups are ambiguously placed with extremely long branches. About half of the isolates, all from benthic or supralittoral habitats, have been persistently sarcinoid in liquid media since isolation. This trait is spread across the Dunaliella phylogeny. The morphology of two sarcinoid strains was documented with light microscopy, revealing an extensive glycocalyx. Clumping behavior of unicellular and sarcinoid strains was unaffected by presence or absence of Mg or Ca , addition of lectin-inhibiting monosaccharides, or water-soluble factors from morphologically opposite strains. Results from this investigation have significantly expanded our current understanding of Dunaliella diversity, but it seems likely that much remains to be discovered with additional sampling.

TechConnect Briefs, Jun 15, 2014

Algal Research-Biomass Biofuels and Bioproducts, Sep 1, 2016

2023 IEEE 21st International Conference on Industrial Informatics (INDIN)

Frontiers in Marine Science, 2021

Coastal countries have traditionally relied on the existing marine resources (e.g., fishing, food... more Coastal countries have traditionally relied on the existing marine resources (e.g., fishing, food, transport, recreation, and tourism) as well as tried to support new economic endeavors (ocean energy, desalination for water supply, and seabed mining). Modern societies and lifestyle resulted in an increased demand for dietary diversity, better health and well-being, new biomedicines, natural cosmeceuticals, environmental conservation, and sustainable energy sources. These societal needs stimulated the interest of researchers on the diverse and underexplored marine environments as promising and sustainable sources of biomolecules and biomass, and they are addressed by the emerging field of marine (blue) biotechnology. Blue biotechnology provides opportunities for a wide range of initiatives of commercial interest for the pharmaceutical, biomedical, cosmetic, nutraceutical, food, feed, agricultural, and related industries. This article synthesizes the essence, opportunities, responsibi...

Environmental Forensics, 2020

Frontiers in Marine Science, 2020

Marine Drugs

As the quest for marine-derived compounds with pharmacological and biotechnological potential ups... more As the quest for marine-derived compounds with pharmacological and biotechnological potential upsurges, the importance of following regulations and applying Responsible Research and Innovation (RRI) also increases. This article aims at: (1) presenting an overview of regulations and policies at the international and EU level, while demonstrating a variability in their implementation; (2) highlighting the importance of RRI in biodiscovery; and (3) identifying gaps and providing recommendations on how to improve the market acceptability and compliance of novel Blue Biotechnology compounds. This article is the result of the work of the Working Group 4 “Legal aspects, IPR and Ethics” of the COST Action CA18238 Ocean4Biotech, a network of more than 130 Marine Biotechnology scientists and practitioners from 37 countries. Three qualitative surveys (“Understanding of the Responsible Research and Innovation concept”, “Application of the Nagoya Protocol in Your Research”, and “Brief Survey abo...

Marine Drugs

Microalgae and cyanobacteria are diverse groups of organisms with great potential to benefit soci... more Microalgae and cyanobacteria are diverse groups of organisms with great potential to benefit societies across the world. These organisms are currently used in food, feed, pharmaceutical and cosmetic industries. In addition, a variety of novel compounds are being isolated. Commercial production of photosynthetic microalgae and cyanobacteria requires cultivation on a large scale with high throughput. However, scaling up production from lab-based systems to large-scale systems is a complex and potentially costly endeavor. In this review, we summarise all aspects of large-scale cultivation, including aims of cultivation, species selection, types of cultivation (ponds, photobioreactors, and biofilms), water and nutrient sources, temperature, light and mixing, monitoring, contamination, harvesting strategies, and potential environmental risks. Importantly, we also present practical recommendations and discuss challenges of profitable large-scale systems associated with economical design, ...

Zenodo (CERN European Organization for Nuclear Research), Feb 23, 2023

Frontiers in Marine Science, 2021

Biomass is defined as organic matter from living organisms represented in all kingdoms. It is rec... more Biomass is defined as organic matter from living organisms represented in all kingdoms. It is recognized to be an excellent source of proteins, polysaccharides and lipids and, as such, embodies a tailored feedstock for new products and processes to apply in green industries. The industrial processes focused on the valorization of terrestrial biomass are well established, but marine sources still represent an untapped resource. Oceans and seas occupy over 70% of the Earth’s surface and are used intensively in worldwide economies through the fishery industry, as logistical routes, for mining ores and exploitation of fossil fuels, among others. All these activities produce waste. The other source of unused biomass derives from the beach wrack or washed-ashore organic material, especially in highly eutrophicated marine ecosystems. The development of high-added-value products from these side streams has been given priority in recent years due to the detection of a broad range of biopolym...

Journal of Aquaculture & Marine Biology

Small, shallow estuaries can be highly vulnerable to land use changes, eutrophication and habitat... more Small, shallow estuaries can be highly vulnerable to land use changes, eutrophication and habitat loss but are understudied with respect to their larger counterparts. Where they are monitored, the descriptors of their environmental status are typically chlorophyll a as a proxy for phytoplankton abundance and nutrient concentration as a presumed driver of the phytoplankton community. We present data from a shallow estuary, Weeks Bay, Alabama (USA), that demonstrates that chlorophyll a and nutrient concentrations are inadequate descriptors of ecological state. Weeks Bay had relatively high nutrient concentrations (86–169µM total nitrogen and 1.0–5.2µM total phosphorus) and highly variable chlorophyll a concentrations (2.2–160.5μgL-1). The variability in chlorophyll a was most highly correlated with nutrient levels and river discharge. There was no relationship between chlorophyll a and community composition. Two of three maxima in chlorophyll a (> 100 μgL-1) were caused by non-toxi...

Marine Drugs

Microalgae produce a variety of compounds that are beneficial to human and animal health. Among t... more Microalgae produce a variety of compounds that are beneficial to human and animal health. Among these compounds are carotenoids, which are microalgal pigments with unique antioxidant and coloring properties. The objective of this review is to evaluate the potential of using microalgae as a commercial feedstock for carotenoid production. While microalgae can produce some of the highest concentrations of carotenoids (especially astaxanthin) in living organisms, there are challenges associated with the mass production of microalgae and downstream processing of carotenoids. This review discusses the synthesis of carotenoids within microalgae, their physiological role, large-scale cultivation of microalgae, up- and down-stream processing, commercial applications, natural versus synthetic carotenoids, and opportunities and challenges facing the carotenoid markets. We emphasize legal aspects and regulatory challenges associated with the commercial production of microalgae-based carotenoids...

Journal of Marine Science and Engineering

Spherical cells were detected in low salinity waters during a bloom of Karenia brevis in Alabama ... more Spherical cells were detected in low salinity waters during a bloom of Karenia brevis in Alabama coastal waters. These balls resembled K. brevis in size and organelle appearance, contained similar concentration of brevetoxin, and occurred during ongoing K. brevis bloom. Based on the environmental conditions in which these cells were observed, we speculate that a rapid drop in salinity triggered the sphere formation in K. brevis. Brevetoxin concentrations were comparable between surface water samples containing typical and atypical cells ranging from 1 to 10 ng/mL brevetoxin-3 equivalents. Accurate identification and quantification of cell abundance in the water column is essential for routine monitoring of coastal waters, so misidentification of these spherical cells may result in significant underestimation of cell densities, and consequently, brevetoxin level. These potential discrepancies may negatively impact the quality of regulatory decisions and their impact on shellfish harv...

Journal of phycology, Jan 21, 2018

Dunaliella, a commercially important chlorophyte, is globally distributed in saline habitats. Mor... more Dunaliella, a commercially important chlorophyte, is globally distributed in saline habitats. Morphological species have not been definitively reconciled with phylogenetic analyses. Considerable genetic diversity continues to be discovered in new isolates, especially from soil and benthic habitats. Twenty-nine new isolates from Great Salt Lake, Utah, many from benthic or supralittoral habitats, were phylogenetically analyzed using ITS1+5.8S+ITS2 in comparison to a broad sampling of available sequences. A few new isolates align in one branch of a bifurcated monophyletic Dunaliella salina clade and several cluster within monophyletic D. viridis. Several others align with relatively few unnamed strains from other locations, comprising a diverse clade that may represent two or more new species. The overall Dunaliella clade is relatively robust, but the nearest outgroups are ambiguously placed with extremely long branches. About half of the isolates, all from benthic or supralittoral hab...

Zenodo (CERN European Organization for Nuclear Research), Mar 31, 2023

Journal of Phycology, Jun 13, 2018

Dunaliella, a commercially important chlorophyte, is globally distributed in saline habitats. Mor... more Dunaliella, a commercially important chlorophyte, is globally distributed in saline habitats. Morphological species have not been definitively reconciled with phylogenetic analyses. Considerable genetic diversity continues to be discovered in new isolates, especially from soil and benthic habitats. Twenty-nine new isolates from Great Salt Lake, Utah, many from benthic or supralittoral habitats, were phylogenetically analyzed using ITS1+5.8S+ITS2 in comparison to a broad sampling of available sequences. A few new isolates align in one branch of a bifurcated monophyletic Dunaliella salina clade and several cluster within monophyletic D. viridis. Several others align with relatively few unnamed strains from other locations, comprising a diverse clade that may represent two or more new species. The overall Dunaliella clade is relatively robust, but the nearest outgroups are ambiguously placed with extremely long branches. About half of the isolates, all from benthic or supralittoral habitats, have been persistently sarcinoid in liquid media since isolation. This trait is spread across the Dunaliella phylogeny. The morphology of two sarcinoid strains was documented with light microscopy, revealing an extensive glycocalyx. Clumping behavior of unicellular and sarcinoid strains was unaffected by presence or absence of Mg or Ca , addition of lectin-inhibiting monosaccharides, or water-soluble factors from morphologically opposite strains. Results from this investigation have significantly expanded our current understanding of Dunaliella diversity, but it seems likely that much remains to be discovered with additional sampling.

TechConnect Briefs, Jun 15, 2014

Algal Research-Biomass Biofuels and Bioproducts, Sep 1, 2016

2023 IEEE 21st International Conference on Industrial Informatics (INDIN)

Frontiers in Marine Science, 2021

Coastal countries have traditionally relied on the existing marine resources (e.g., fishing, food... more Coastal countries have traditionally relied on the existing marine resources (e.g., fishing, food, transport, recreation, and tourism) as well as tried to support new economic endeavors (ocean energy, desalination for water supply, and seabed mining). Modern societies and lifestyle resulted in an increased demand for dietary diversity, better health and well-being, new biomedicines, natural cosmeceuticals, environmental conservation, and sustainable energy sources. These societal needs stimulated the interest of researchers on the diverse and underexplored marine environments as promising and sustainable sources of biomolecules and biomass, and they are addressed by the emerging field of marine (blue) biotechnology. Blue biotechnology provides opportunities for a wide range of initiatives of commercial interest for the pharmaceutical, biomedical, cosmetic, nutraceutical, food, feed, agricultural, and related industries. This article synthesizes the essence, opportunities, responsibi...

Environmental Forensics, 2020

Frontiers in Marine Science, 2020

Marine Drugs

As the quest for marine-derived compounds with pharmacological and biotechnological potential ups... more As the quest for marine-derived compounds with pharmacological and biotechnological potential upsurges, the importance of following regulations and applying Responsible Research and Innovation (RRI) also increases. This article aims at: (1) presenting an overview of regulations and policies at the international and EU level, while demonstrating a variability in their implementation; (2) highlighting the importance of RRI in biodiscovery; and (3) identifying gaps and providing recommendations on how to improve the market acceptability and compliance of novel Blue Biotechnology compounds. This article is the result of the work of the Working Group 4 “Legal aspects, IPR and Ethics” of the COST Action CA18238 Ocean4Biotech, a network of more than 130 Marine Biotechnology scientists and practitioners from 37 countries. Three qualitative surveys (“Understanding of the Responsible Research and Innovation concept”, “Application of the Nagoya Protocol in Your Research”, and “Brief Survey abo...

Marine Drugs

Microalgae and cyanobacteria are diverse groups of organisms with great potential to benefit soci... more Microalgae and cyanobacteria are diverse groups of organisms with great potential to benefit societies across the world. These organisms are currently used in food, feed, pharmaceutical and cosmetic industries. In addition, a variety of novel compounds are being isolated. Commercial production of photosynthetic microalgae and cyanobacteria requires cultivation on a large scale with high throughput. However, scaling up production from lab-based systems to large-scale systems is a complex and potentially costly endeavor. In this review, we summarise all aspects of large-scale cultivation, including aims of cultivation, species selection, types of cultivation (ponds, photobioreactors, and biofilms), water and nutrient sources, temperature, light and mixing, monitoring, contamination, harvesting strategies, and potential environmental risks. Importantly, we also present practical recommendations and discuss challenges of profitable large-scale systems associated with economical design, ...

Zenodo (CERN European Organization for Nuclear Research), Feb 23, 2023

Frontiers in Marine Science, 2021

Biomass is defined as organic matter from living organisms represented in all kingdoms. It is rec... more Biomass is defined as organic matter from living organisms represented in all kingdoms. It is recognized to be an excellent source of proteins, polysaccharides and lipids and, as such, embodies a tailored feedstock for new products and processes to apply in green industries. The industrial processes focused on the valorization of terrestrial biomass are well established, but marine sources still represent an untapped resource. Oceans and seas occupy over 70% of the Earth’s surface and are used intensively in worldwide economies through the fishery industry, as logistical routes, for mining ores and exploitation of fossil fuels, among others. All these activities produce waste. The other source of unused biomass derives from the beach wrack or washed-ashore organic material, especially in highly eutrophicated marine ecosystems. The development of high-added-value products from these side streams has been given priority in recent years due to the detection of a broad range of biopolym...

Journal of Aquaculture & Marine Biology

Small, shallow estuaries can be highly vulnerable to land use changes, eutrophication and habitat... more Small, shallow estuaries can be highly vulnerable to land use changes, eutrophication and habitat loss but are understudied with respect to their larger counterparts. Where they are monitored, the descriptors of their environmental status are typically chlorophyll a as a proxy for phytoplankton abundance and nutrient concentration as a presumed driver of the phytoplankton community. We present data from a shallow estuary, Weeks Bay, Alabama (USA), that demonstrates that chlorophyll a and nutrient concentrations are inadequate descriptors of ecological state. Weeks Bay had relatively high nutrient concentrations (86–169µM total nitrogen and 1.0–5.2µM total phosphorus) and highly variable chlorophyll a concentrations (2.2–160.5μgL-1). The variability in chlorophyll a was most highly correlated with nutrient levels and river discharge. There was no relationship between chlorophyll a and community composition. Two of three maxima in chlorophyll a (> 100 μgL-1) were caused by non-toxi...

Marine Drugs

Microalgae produce a variety of compounds that are beneficial to human and animal health. Among t... more Microalgae produce a variety of compounds that are beneficial to human and animal health. Among these compounds are carotenoids, which are microalgal pigments with unique antioxidant and coloring properties. The objective of this review is to evaluate the potential of using microalgae as a commercial feedstock for carotenoid production. While microalgae can produce some of the highest concentrations of carotenoids (especially astaxanthin) in living organisms, there are challenges associated with the mass production of microalgae and downstream processing of carotenoids. This review discusses the synthesis of carotenoids within microalgae, their physiological role, large-scale cultivation of microalgae, up- and down-stream processing, commercial applications, natural versus synthetic carotenoids, and opportunities and challenges facing the carotenoid markets. We emphasize legal aspects and regulatory challenges associated with the commercial production of microalgae-based carotenoids...

Journal of Marine Science and Engineering

Spherical cells were detected in low salinity waters during a bloom of Karenia brevis in Alabama ... more Spherical cells were detected in low salinity waters during a bloom of Karenia brevis in Alabama coastal waters. These balls resembled K. brevis in size and organelle appearance, contained similar concentration of brevetoxin, and occurred during ongoing K. brevis bloom. Based on the environmental conditions in which these cells were observed, we speculate that a rapid drop in salinity triggered the sphere formation in K. brevis. Brevetoxin concentrations were comparable between surface water samples containing typical and atypical cells ranging from 1 to 10 ng/mL brevetoxin-3 equivalents. Accurate identification and quantification of cell abundance in the water column is essential for routine monitoring of coastal waters, so misidentification of these spherical cells may result in significant underestimation of cell densities, and consequently, brevetoxin level. These potential discrepancies may negatively impact the quality of regulatory decisions and their impact on shellfish harv...

Journal of phycology, Jan 21, 2018

Dunaliella, a commercially important chlorophyte, is globally distributed in saline habitats. Mor... more Dunaliella, a commercially important chlorophyte, is globally distributed in saline habitats. Morphological species have not been definitively reconciled with phylogenetic analyses. Considerable genetic diversity continues to be discovered in new isolates, especially from soil and benthic habitats. Twenty-nine new isolates from Great Salt Lake, Utah, many from benthic or supralittoral habitats, were phylogenetically analyzed using ITS1+5.8S+ITS2 in comparison to a broad sampling of available sequences. A few new isolates align in one branch of a bifurcated monophyletic Dunaliella salina clade and several cluster within monophyletic D. viridis. Several others align with relatively few unnamed strains from other locations, comprising a diverse clade that may represent two or more new species. The overall Dunaliella clade is relatively robust, but the nearest outgroups are ambiguously placed with extremely long branches. About half of the isolates, all from benthic or supralittoral hab...