SWO-EDAM Merge: merging data hierarchies (original) (raw)

There are fewer classes within SWO data hierarchy compared with the SWO data format specification hierarchy, and therefore this merge step was simpler. A list of issues arising is available in a separate post. The following changes were made:

• Made EDAM:Data a child of “Information content entity” (via subclass axiom stored within SWO_core.owl)
• Made EDAM:Data equivalent to IAO:0000027(data) – (via equivalent class statement)
• SWO classes obsoleted due to equivalence with EDAM:
  • Image (efo/swo/SWO_0000580) with Image (data_2968).
  • Heatmap (efo/swo/SWO_0000571) with Heat map (data_1636). As the EDAM class is a child of Microarray image, the subclass axiom relating the SWO class to data has been removed as it is now unnecessary.
  • Microarray data (efo/swo/SWO_0000624) with Microarray data (data_2603).
  • ontology (swo/ontology) with Ontology (data_0582).

About Allyson Lister

Find me at https://orcid.org/0000-0002-7702-4495 and https://www.eng.ox.ac.uk/people/allyson-lister/

This entry was posted in ontology and tagged data, edam, swo-edam merge. Bookmark the permalink.