Bioconductor (original) (raw)

Answer: Biological replicates consideration in DESeq2 design formula. byulysses • 0

As you can see, the "replicate" effect also known as the "batch effect" is dominating the principal component analysis (PCA), which introdu…

Answer: Deseq2 paired sample in the design is considered as "batch"? byvillage • 0

It's exact same. To account for variations in donors, the analysis will be repeated with adjustments. To be more precise, it is the same as…

Comment: Deadline Extended - BioC2024 Abstracts and Sticker Contest - April 1st! byRay • 0

This minimalist approach ensures that success depends entirely on your skill, making every victory feel earned in [speed stars online][1] …

Answer: Retrieve Salmon transcript quantification file from recount3 byLeonardo Collado Torres ★ 1.1k

Hi K, The Salmon quantification files are not available at https://aws.amazon.com/marketplace/pp/prodview-t3rflz3f557jq or JHU IDIES Sci…

Answer: error from library(IlluminaHumanMethylationMSAmanifest) byJames W. MacDonald 68k

Thanks for the heads-up! I have fixed the typos and the updated version should be available for download in the next few days.