Xin et al. Human Pancreas Data (original) (raw)
Yingxin Lin
Source: vignettes/webOnly/Xin_humanPancreas.Rmd
Xin_humanPancreas.Rmd
Train Model
## Class: scClassifyTrainModel
## Model name: Xin_HumanPancreas
## Feature selection methods: limma DV DD chisq BI
## Number of cells in the training data: 1474
## Number of cell types in the training data: 4
Cell type composition:
Cell Tpye | Freq |
---|---|
alpha | 885 |
beta | 461 |
delta | 49 |
gamma | 79 |
Visualisation
tSNE
Cell Type Tree
Reference
Xin, Y. et al., 2016. RNA Sequencing of Single Human Islet Cells Reveals Type 2 Diabetes Genes. Cell Metabolism.