Paula Sampaio | Universidade do Minho (original) (raw)

Papers by Paula Sampaio

Research paper thumbnail of Metabolic plasticity as a strategy for virulence: participation of Candida albicans transcription factor RLM1 in host-pathogen interaction

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Research paper thumbnail of Epidemiology of Invasive Candidiasis and Challenges for the Mycology Laboratory: Specificities of Candida glabrata

Curr Clin Micro Rpt, 2014

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Research paper thumbnail of Virulence Attenuation of Candida albicans Genetic Variants Isolated from a Patient with a Recurrent Bloodstream Infection

PLoS ONE, 2010

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Research paper thumbnail of Application of MALDI-TOF MS for requalification of a Candida clinical isolates culture collection

Brazilian Journal of Microbiology, 2014

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Research paper thumbnail of Participation of Candida albicans Transcription Factor RLM1 in Cell Wall Biogenesis and Virulence

PLoS ONE, 2014

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Research paper thumbnail of Genetic relatedness and antifungal susceptibility profile ofCandida albicansisolates from fungaemia patients

Medical Mycology, 2011

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Research paper thumbnail of Isolates from hospital environments are the most virulent of the Candida parapsilosiscomplex

BMC Microbiology, 2011

Background Candida parapsilosis is frequently isolated from hospital environments, like air and s... more Background Candida parapsilosis is frequently isolated from hospital environments, like air and surfaces, and causes serious nosocomial infections. Molecular studies provided evidence of great genetic diversity within the C. parapsilosis species complex but, despite their growing importance as pathogens, little is known about their potential to cause disease, particularly their interactions with phagocytes. In this study, clinical and environmental C. parapsilosis isolates, and strains of the related species C. orthopsilosis and C. metapsilosis were assayed for their ability to induce macrophage cytotocixity and secretion of the pro-inflammatory cytokine TNF-α, to produce pseudo-hyphae and to secrete hydrolytic enzymes. Results Environmental C. parapsilosis isolates caused a statistically significant (p = 0.0002) higher cell damage compared with the clinical strains, while C. orthopsilosis and C. metapsilosis were less cytotoxic. On the other hand, clinical isolates induced a higher...

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Research paper thumbnail of A new method for yeast phagocytosis analysis by flow cytometry

Journal of Microbiological Methods, 2014

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Research paper thumbnail of Vaccination Against Fungal Diseases: Lessons from Candida albicans

Immunogenetics of Fungal Diseases

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Research paper thumbnail of Single Cell Oil Production by Oleaginous Yeasts Grown in Synthetic and Waste-Derived Volatile Fatty Acids

Microorganisms

Four yeast isolates from the species—Apiotrichum brassicae, Candida tropicalis, Metschnikowia pul... more Four yeast isolates from the species—Apiotrichum brassicae, Candida tropicalis, Metschnikowia pulcherrima, and Pichia kudriavzevii—previously selected by their oleaginous character and growth flexibility in different carbon sources, were tested for their capacity to convert volatile fatty acids into lipids, in the form of single cell oils. Growth, lipid yields, volatile fatty acids consumption, and long-chain fatty acid profiles were evaluated in media supplemented with seven different volatile fatty acids (acetic, butyric, propionic, isobutyric, valeric, isovaleric, and caproic), and also in a dark fermentation effluent filtrate. Yeasts A. brassicae and P. kudriavzevii attained lipid productivities of more than 40% (w/w), mainly composed of oleic (>40%), palmitic (20%), and stearic (20%) acids, both in synthetic media and in the waste-derived effluent filtrate. These isolates may be potential candidates for single cell oil production in larger scale applications by using alterna...

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Research paper thumbnail of Multiplex PCR Based Strategy for Detection of Fungal Pathogen DNA in Patients with Suspected Invasive Fungal Infections

Journal of Fungi

A new and easy polymerase chain reaction (PCR) multiplex strategy, for the identification of the ... more A new and easy polymerase chain reaction (PCR) multiplex strategy, for the identification of the most common fungal species involved in invasive fungal infections (IFI) was developed in this work. Two panels with species-specific markers were designed, the Candida Panel for the identification of Candida species, and the Filamentous Fungi Panel for the identification of Aspergillus species and Rhizopusarrhizus. The method allowed the correct identification of all targeted pathogens using extracted DNA or by colony PCR, showed no cross-reactivity with nontargeted species and allowed identification of different species in mixed infections. Sensitivity reached 10 to 1 pg of DNA and was suitable for clinical samples from sterile sites, with a sensitivity of 89% and specificity of 100%. Overall, the study showed that the new method is suitable for the identification of the ten most important fungal species involved in IFI, not only from positive blood cultures but also from clinical sampl...

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Research paper thumbnail of Vaccination Against Fungal Diseases: Lessons from Candida albicans

Immunogenetics of Fungal Diseases, 2017

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Research paper thumbnail of Modified high-throughput Nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source

BMC Microbiology

Background Over the last years oleaginous yeasts have been studied for several energetic, oleoche... more Background Over the last years oleaginous yeasts have been studied for several energetic, oleochemical, medical and pharmaceutical purposes. However, only a small number of yeasts are known and have been deeply exploited. The search for new isolates with high oleaginous capacity becomes imperative, as well as the use of alternative and ecological carbon sources for yeast growth. Results In the present study a high-throughput screening comprising 366 distinct yeast isolates was performed by applying an optimised protocol based on two approaches: (I) yeast cultivation on solid medium using acetic acid as carbon source, (II) neutral lipid estimation by fluorimetry using the lipophilic dye Nile red. Conclusions Results showed that, with the proposed methodology, the oleaginous potential of yeasts with broad taxonomic diversity and variety of growth characteristics was discriminated. Furthermore, this work clearly demonstrated the association of the oleaginous yeast character to the stra...

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Research paper thumbnail of Relevance of Macrophage Extracellular Traps in C. albicans Killing

Frontiers in Immunology

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Research paper thumbnail of Multiplex PCR system for fungal pathogen detection

Annals of Medicine

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Research paper thumbnail of Genomic and transcriptomic analysis of Saccharomyces cerevisiae isolates with focus in succinic acid production

FEMS Yeast Research

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Research paper thumbnail of Candida albicans microsatellite CAI-16 sequence

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Research paper thumbnail of Candida albicans microsatellite CAI-20 sequence

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Research paper thumbnail of Candida albicans microsatellite CAI-27 sequence

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Research paper thumbnail of Candida albicans microsatellite CAI-28 sequence

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Research paper thumbnail of Metabolic plasticity as a strategy for virulence: participation of Candida albicans transcription factor RLM1 in host-pathogen interaction

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Research paper thumbnail of Epidemiology of Invasive Candidiasis and Challenges for the Mycology Laboratory: Specificities of Candida glabrata

Curr Clin Micro Rpt, 2014

Bookmarks Related papers MentionsView impact

Research paper thumbnail of Virulence Attenuation of Candida albicans Genetic Variants Isolated from a Patient with a Recurrent Bloodstream Infection

PLoS ONE, 2010

Bookmarks Related papers MentionsView impact

Research paper thumbnail of Application of MALDI-TOF MS for requalification of a Candida clinical isolates culture collection

Brazilian Journal of Microbiology, 2014

Bookmarks Related papers MentionsView impact

Research paper thumbnail of Participation of Candida albicans Transcription Factor RLM1 in Cell Wall Biogenesis and Virulence

PLoS ONE, 2014

Bookmarks Related papers MentionsView impact

Research paper thumbnail of Genetic relatedness and antifungal susceptibility profile ofCandida albicansisolates from fungaemia patients

Medical Mycology, 2011

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Research paper thumbnail of Isolates from hospital environments are the most virulent of the Candida parapsilosiscomplex

BMC Microbiology, 2011

Background Candida parapsilosis is frequently isolated from hospital environments, like air and s... more Background Candida parapsilosis is frequently isolated from hospital environments, like air and surfaces, and causes serious nosocomial infections. Molecular studies provided evidence of great genetic diversity within the C. parapsilosis species complex but, despite their growing importance as pathogens, little is known about their potential to cause disease, particularly their interactions with phagocytes. In this study, clinical and environmental C. parapsilosis isolates, and strains of the related species C. orthopsilosis and C. metapsilosis were assayed for their ability to induce macrophage cytotocixity and secretion of the pro-inflammatory cytokine TNF-α, to produce pseudo-hyphae and to secrete hydrolytic enzymes. Results Environmental C. parapsilosis isolates caused a statistically significant (p = 0.0002) higher cell damage compared with the clinical strains, while C. orthopsilosis and C. metapsilosis were less cytotoxic. On the other hand, clinical isolates induced a higher...

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Research paper thumbnail of A new method for yeast phagocytosis analysis by flow cytometry

Journal of Microbiological Methods, 2014

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Research paper thumbnail of Vaccination Against Fungal Diseases: Lessons from Candida albicans

Immunogenetics of Fungal Diseases

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Research paper thumbnail of Single Cell Oil Production by Oleaginous Yeasts Grown in Synthetic and Waste-Derived Volatile Fatty Acids

Microorganisms

Four yeast isolates from the species—Apiotrichum brassicae, Candida tropicalis, Metschnikowia pul... more Four yeast isolates from the species—Apiotrichum brassicae, Candida tropicalis, Metschnikowia pulcherrima, and Pichia kudriavzevii—previously selected by their oleaginous character and growth flexibility in different carbon sources, were tested for their capacity to convert volatile fatty acids into lipids, in the form of single cell oils. Growth, lipid yields, volatile fatty acids consumption, and long-chain fatty acid profiles were evaluated in media supplemented with seven different volatile fatty acids (acetic, butyric, propionic, isobutyric, valeric, isovaleric, and caproic), and also in a dark fermentation effluent filtrate. Yeasts A. brassicae and P. kudriavzevii attained lipid productivities of more than 40% (w/w), mainly composed of oleic (>40%), palmitic (20%), and stearic (20%) acids, both in synthetic media and in the waste-derived effluent filtrate. These isolates may be potential candidates for single cell oil production in larger scale applications by using alterna...

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Research paper thumbnail of Multiplex PCR Based Strategy for Detection of Fungal Pathogen DNA in Patients with Suspected Invasive Fungal Infections

Journal of Fungi

A new and easy polymerase chain reaction (PCR) multiplex strategy, for the identification of the ... more A new and easy polymerase chain reaction (PCR) multiplex strategy, for the identification of the most common fungal species involved in invasive fungal infections (IFI) was developed in this work. Two panels with species-specific markers were designed, the Candida Panel for the identification of Candida species, and the Filamentous Fungi Panel for the identification of Aspergillus species and Rhizopusarrhizus. The method allowed the correct identification of all targeted pathogens using extracted DNA or by colony PCR, showed no cross-reactivity with nontargeted species and allowed identification of different species in mixed infections. Sensitivity reached 10 to 1 pg of DNA and was suitable for clinical samples from sterile sites, with a sensitivity of 89% and specificity of 100%. Overall, the study showed that the new method is suitable for the identification of the ten most important fungal species involved in IFI, not only from positive blood cultures but also from clinical sampl...

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Research paper thumbnail of Vaccination Against Fungal Diseases: Lessons from Candida albicans

Immunogenetics of Fungal Diseases, 2017

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Research paper thumbnail of Modified high-throughput Nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source

BMC Microbiology

Background Over the last years oleaginous yeasts have been studied for several energetic, oleoche... more Background Over the last years oleaginous yeasts have been studied for several energetic, oleochemical, medical and pharmaceutical purposes. However, only a small number of yeasts are known and have been deeply exploited. The search for new isolates with high oleaginous capacity becomes imperative, as well as the use of alternative and ecological carbon sources for yeast growth. Results In the present study a high-throughput screening comprising 366 distinct yeast isolates was performed by applying an optimised protocol based on two approaches: (I) yeast cultivation on solid medium using acetic acid as carbon source, (II) neutral lipid estimation by fluorimetry using the lipophilic dye Nile red. Conclusions Results showed that, with the proposed methodology, the oleaginous potential of yeasts with broad taxonomic diversity and variety of growth characteristics was discriminated. Furthermore, this work clearly demonstrated the association of the oleaginous yeast character to the stra...

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Research paper thumbnail of Relevance of Macrophage Extracellular Traps in C. albicans Killing

Frontiers in Immunology

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Research paper thumbnail of Multiplex PCR system for fungal pathogen detection

Annals of Medicine

Bookmarks Related papers MentionsView impact

Research paper thumbnail of Genomic and transcriptomic analysis of Saccharomyces cerevisiae isolates with focus in succinic acid production

FEMS Yeast Research

Bookmarks Related papers MentionsView impact

Research paper thumbnail of Candida albicans microsatellite CAI-16 sequence

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Research paper thumbnail of Candida albicans microsatellite CAI-20 sequence

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Research paper thumbnail of Candida albicans microsatellite CAI-27 sequence

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Research paper thumbnail of Candida albicans microsatellite CAI-28 sequence

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