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Papers by Marcin Rapacz

International Journal of Molecular Sciences, Mar 6, 2021

Common buckwheat (Fagopyrum esculentum Moench), a pseudocereal crop, produces a large number of f... more Common buckwheat (Fagopyrum esculentum Moench), a pseudocereal crop, produces a large number of flowers, but this does not guarantee high seed yields. This species demonstrates strong abortion of flowers and embryos. High temperatures during the generative growth phase result in an increase in the degeneration of embryo sacs. The aim of this study was to investigate proteomic changes in flowers and leaves of two common buckwheat accessions with different degrees of heat tolerance, Panda and PA15. Two-dimensional gel electrophoresis and mass spectrometry techniques were used to analyze the proteome profiles. Analyses were conducted for flower buds, open flowers capable of fertilization, and wilted flowers, as well as donor leaves, i.e., those growing closest to the inflorescences. High temperature up-regulated the expression of 182 proteins. The proteomic response to heat stress differed between the accessions and among their organs. In the Panda accession, we observed a change in abundance of 17, 13, 28, and 11 proteins, in buds, open and wilted flowers, and leaves, respectively. However, in the PA15 accession there were 34, 21, 63, and 21 such proteins, respectively. Fifteen heat-affected proteins were common to both accessions. The indole-3-glycerol phosphate synthase chloroplastic-like isoform X2 accumulated in the open flowers of the heat-sensitive cultivar Panda in response to high temperature, and may be a candidate protein as a marker of heat sensitivity in buckwheat plants.

Identification of novel, potential freezing tolerance genes in barley on the basis of QTL and association mapping

Acta Physiologiae Plantarum, 2016

The role of light in cold deacclimation of oilseed rape

Acta Physiologiae Plantarum, 2001

PLOS ONE, Dec 23, 2021

Strawberry is one of the plants sensitive to salt and alkalinity stress. Light quality affects pl... more Strawberry is one of the plants sensitive to salt and alkalinity stress. Light quality affects plant growth and metabolic activities. However, there is no clear answer in the literature on how light can improve the performance of the photosynthetic apparatus of this species under salt and alkalinity stress. The aim of this work was to investigate the effects of different spectra of supplemental light on strawberry (cv. Camarosa) under salt and alkalinity stress conditions. Light spectra of blue (with peak 460 nm), red (with peak 660 nm), blue/red (1:3), white/yellow (1:1) (400-700 nm) and ambient light were used as control. There were three stress treatments: control (no stress), alkalinity (40 mM NaHCO 3 ), and salinity (80 mM NaCl). Under stress conditions, red and red/blue light had a positive effect on CO 2 assimilation. In addition, blue/red light increased intrinsic water use efficiency (WUEi) under both stress conditions. Salinity and alkalinity stress decreased OJIP curves compared to the control treatment. Blue light caused an increase in its in plants under salinity stress, and red and blue/red light caused an increase in its in plants under alkalinity. Both salt and alkalinity stress caused a significant reduction in photosystem II (PSII) performance indices and quantum yield parameters. Adjustment of light spectra, especially red light, increased these parameters. It can be concluded that the adverse effects of salt and alkalinity stress on photosynthesis can be partially alleviated by changing the light spectra.

Journal of Applied Genetics, Sep 7, 2021

Freezing tolerance of triticale is a major trait contributing to its winter hardiness. The identi... more Freezing tolerance of triticale is a major trait contributing to its winter hardiness. The identification of genomic regionsquantitative trait loci (QTL) and molecular markers associated with freezing tolerance in winter hexaploid triticale -was the aim of this study. For that purpose, a new genetic linkage map was developed for the population of 92 doubled haploid lines derived from 'Hewo' × 'Magnat' F 1 hybrid. Those lines, together with parents were subjected to freezing tolerance test three times during two winter seasons. Plants were grown and cold-hardened under natural fall/winter conditions and then subjected to freezing in controlled conditions. Freezing tolerance was assessed as the plants recovery (REC), the electrolyte leakage (EL) from leaves and chlorophyll fluorescence parameters (JIP) after freezing. Three consistent QTL for several fluorescence parameters, electrolyte leakage, and the percentage of the survived plants were identified with composite interval mapping (CIM) and single marker analysis (SMA). The first locus Qfr.hm-7A.1 explained 9% of variation of both electrolyte leakage and plants recovery after freezing. Two QTL explaining up to 12% of variation in plants recovery and shared by selected chlorophyll fluorescence parameters were found on 4R and 5R chromosomes. Finally, main locus Qchl.hm-5A.1 was detected for chlorophyll fluorescence parameters that explained up to 19.6% of phenotypic variation. The co-located QTL on chromosomes 7A.1, 4R and 5R, clearly indicated physiological and genetic relationship of the plant survival after freezing with the ability to maintain optimal photochemical activity of the photosystem II and preservation of the cell membranes integrity. The genes located in silico within the identified QTL include those encoding BTR1-like protein, transmembrane helix proteins like potassium channel, and phosphoric ester hydrolase involved in response to osmotic stress as well as proteins involved in the regulation of the gene expression, chloroplast RNA processing, and pyrimidine salvage pathway. Additionally, our results confirm that the JIP test is a valuable tool to evaluate freezing tolerance of triticale under unstable winter environments.

Frontiers in Plant Science, Jan 9, 2019

Photosynthetic acclimation to cold conditions is an important factor influencing freezing toleran... more Photosynthetic acclimation to cold conditions is an important factor influencing freezing tolerance of plants. Photosynthetic enzyme activities increase as part of a photochemical mechanism underlying photosynthetic acclimation to low temperatures. Additionally, a non-photochemical mechanism may be activated to minimize photooxidative damage. The aim of this study was to test the hypothesis that differences in stomatal conductance in Hordeum vulgare plants with contrasting freezing tolerances induce various strategies for photosynthetic acclimation to cold stress. Different stomatal behaviors during the prehardening step resulted in diverse plant reactions to low-temperature stress. Plants with a relatively low freezing tolerance exhibited decreased stomatal conductance, resulting in decreased photochemical activity, faster induction of the non-photochemical mechanism, and downregulated expression of two Rubisco activase (RcaA) splicing variants. In contrast, plants with a relatively high freezing tolerance that underwent a prehardening step maintained the stomatal conductance at control level and exhibited delayed photochemical activity and RcaA expression decrease, and increased Rubisco activity, which increased net photosynthetic rate. Thus, in barley, the induction of photoinhibition avoidance (i.e., non-photochemical photoacclimation mechanism) is insufficient for an effective cold acclimation. An increase in cold-induced net photosynthetic rate due to open stomata is also necessary.

Functional Plant Biology, 2016

Increased precipitation and snowmelt during warmer winters may lead to low-temperature waterloggi... more Increased precipitation and snowmelt during warmer winters may lead to low-temperature waterlogging of plants. Perennial ryegrass (Lolium perenne L.) is one of the most important cool-season grasses in agriculture. It is well adapted to cold climates, and may be considered as a model system for studying the mechanisms involved in cold acclimation. The aim of this study was to evaluate the effects of waterlogging on photosynthetic acclimation to cold in perennial ryegrass. Two L. perenne genotypes that differ in their responses to waterlogging in terms of freezing tolerance were compared. We evaluated the effects of waterlogging during cold acclimation on the water-soluble carbohydrate concentration, ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) activity, photochemical efficiency of PSII, and transcript levels of the Rubisco activase (RcaA) and sucrose-sucrose fructosyltransferase (1-SST) genes. The genotype that did not accumulate water-soluble carbohydrates in the leaf under waterlogging showed a lower degree of feedback inhibition of photosynthesis under low temperature, and activated a photochemical mechanism of photosynthetic acclimation to cold. The other genotype accumulated water-soluble carbohydrates in the leaf during waterlogging, and activated a non-photochemical mechanism under cold conditions. Different photosynthetic acclimation systems to cold under waterlogging may be activated in these two contrasting L. perenne genotypes.

Agriculture

Remote sensing methods based on UAV and hand-held devices as well have been used to assess the re... more Remote sensing methods based on UAV and hand-held devices as well have been used to assess the response to nitrogen and sulfur fertilization of hypoallergenic genotypes of winter wheat. The field experiment was conducted using the split-split-plot design with three repetitions. The first factor was the two genotypes of winter wheat specified as V1 (without allergic protein) and V2 (with allergic protein), and the second factor was three doses of sulfur fertilization: 0, 20 and 40 kg S per ha. The third factor consisted of six doses of nitrogen fertilization: 0, 40, 60, 80, 100 and 120 kg N·ha−1. Monitoring the values of the indicators depending on the level of nitrogen and sulfur fertilization allowed the results to be used in yield forecasting, assessment of plant condition, LAI value, nutritional status in the cultivation of wheat. The maximum yield should be expected at doses of 94 and 101 kg N ha−1 for genotypes V1 and V2, respectively, giving yields of 5.39 and 4.71 Mg ha−1. On...

Mapping of QTL and candidate genes associated with powdery mildew resistance in triticale (× Triticosecale Wittm.)

Plant Growth Regulation

The effect of early growth conditions on frost resistance of winter oilseed rape (Brassica napus ssp.oleifera)

Triticale is a cereal of high economic importance, however along with the increase in the area of... more Triticale is a cereal of high economic importance, however along with the increase in the area of this cereal, it is more often infected by the fungal pathogen Blumeria graminis, which causes powdery mildew. The rapid development of molecular biology techniques, in particular methods based on molecular markers may be an important tool used in modern plant breeding. Development of genetic maps, location of the QTLs defining the region of the genome associated with resistance and selection of markers linked to particular trait can be used to select resistant genotypes as well as to pyramidize several resistance genes in one variety. In this paper we present a new, high-density genetic map of triticale doubled haploids (DH) population ‘Grenado’ x ‘Zorro’ composed of DArT, silicoDArT and SNP markers. Composite interval mapping method was used to detect eight QTL regions associated with the area under disease progress curve (AUDPC) and 15 regions with the average value of powdery mildew ...

International Journal of Molecular Sciences, 2020

Though winter-hardiness is a complex trait, freezing tolerance was proved to be its main componen... more Though winter-hardiness is a complex trait, freezing tolerance was proved to be its main component. Species from temperate regions acquire tolerance to freezing in a process of cold acclimation, which is associated with the exposure of plants to low but non-freezing temperatures. However, mechanisms of cold acclimation in Lolium-Festuca grasses, important for forage production in Europe, have not been fully recognized. Thus, two L. multiflorum/F. arundinacea introgression forms with distinct freezing tolerance were used herein as models in the comprehensive research to dissect these mechanisms in that group of plants. The work was focused on: (i) analysis of cellular membranes’ integrity; (ii) analysis of plant photosynthetic capacity (chlorophyll fluorescence; gas exchange; gene expression, protein accumulation, and activity of selected enzymes of the Calvin cycle); (iii) analysis of plant antioxidant capacity (reactive oxygen species generation; gene expression, protein accumulati...

Cereal Research Communications, 2019

The increasing economic importance of triticale (×Triticosecale Wittm.) makes this synthetic hybr... more The increasing economic importance of triticale (×Triticosecale Wittm.) makes this synthetic hybrid cereal an interesting object of genetic studies. Genomic regions (QTL) of morphological winter triticale traits were determined using the mapping population of 89 doubled haploids lines (DHs) developed from F 1 hybrid of cv. 'Hewo' and cv. 'Magnat' accompanied with the genetic map consisting of 20 linkage groups assigned to the A (7), B (7), and R ( ) genomes (total of 3539 DArT, SNP-DArT and SSR markers, length of 4997.4 cM). Five independent experiments were performed in the field and greenhouse controlled conditions. A total of 12 major QTLs located on 2B, 5A, 5R, and 6B chromosomes connected to the stem length, the plant height, the spike length, the number of the productive spikelets per spike, the number of grains per spike, and the thousand kernel weight were identified by a composite interval mapping (CIM).

Sensors, 2019

Perennial ryegrass (Lolium perenne L.) belongs to the common cultivated grass species in Central ... more Perennial ryegrass (Lolium perenne L.) belongs to the common cultivated grass species in Central and Western Europe. Despite being considered to be susceptible to drought, it is frequently used for forming the turf in urban green areas. In such areas, the water deficit in soil is recognized as one of the most important environmental factors, which can limit plant growth. The basic aim of this work was to explore the mechanisms standing behind the changes in the photosynthetic apparatus performance of two perennial ryegrass turf varieties grown under drought stress using comprehensive in vivo chlorophyll fluorescence signal analyses and plant gas exchange measurements. Drought was applied after eight weeks of sowing by controlling the humidity of the roots ground medium at the levels of 30, 50, and 70% of the field water capacity. Measurements were carried out at four times: 0, 120, and 240 h after drought application and after recovery (refilling water to 70%). We found that the dif...

Frontiers in Plant Science, 2019

One hundred and nine accessions of spring barley seedlings were phenotyped under soil drought con... more One hundred and nine accessions of spring barley seedlings were phenotyped under soil drought conditions. Chlorophyll fluorescence induction (OJIP) parameters, leaf water content, relative turgidity, net assimilation rate (P N ), and water use efficiency (WUE) of plants were measured. All the tested lines were genotyped by means of DArT sequencing (DArTseq) technology. For association mapping a 11,780 polymorphic DArTseq and 4,725 DArTseq SNP markers were used. Our results revealed dissimilar patterns of the relationships between OJIP-parameters under control and drought conditions. A high level of correlation between parameters characterizing Photosystem's II (PSII) energy trapping efficiency (F v /F m ) and photochemical events downstream of PSII reaction center (e.g., Performance Index-PI CSo ) was observed only in the case of drought-treated plants. Generally, OJIP parameters were correlated with leaf water content (less in control). This correlation was weaker with WUE, and absent with P N . Under drought stress, 6,252 genotype × phenotype associations, which passed false discovery rate (FDR) verification, were found between all the studied phenotypic characteristics (23, including 19 OJIP parameters) and 2,721 markers. On the other hand, only 282 associations passed FDR test in the control. They comprised 22 phenotypic parameters and 205 markers. Probing for gene annotations of sequences was performed for markers associated with F v /F m for both drought and control, markers were associated with studied traits in both control and drought, as well as for markers associated with both OJIP and other physiological parameters in drought. Our work allowed us to conclude that drought treatment differentiates the studied lines through the revealing of relationships between water content and the damages to PSII reaction centers or different components of PSII energy transfer chain. Moreover, the former was not connected with net photosynthesis rate.

Frontiers in Plant Science, 2019

Photosynthetic acclimation to cold conditions is an important factor influencing freezing toleran... more Photosynthetic acclimation to cold conditions is an important factor influencing freezing tolerance of plants. Photosynthetic enzyme activities increase as part of a photochemical mechanism underlying photosynthetic acclimation to low temperatures. Additionally, a non-photochemical mechanism may be activated to minimize photooxidative damage. The aim of this study was to test the hypothesis that differences in stomatal conductance in Hordeum vulgare plants with contrasting freezing tolerances induce various strategies for photosynthetic acclimation to cold stress. Different stomatal behaviors during the prehardening step resulted in diverse plant reactions to low-temperature stress. Plants with a relatively low freezing tolerance exhibited decreased stomatal conductance, resulting in decreased photochemical activity, faster induction of the non-photochemical mechanism, and downregulated expression of two Rubisco activase (RcaA) splicing variants. In contrast, plants with a relatively high freezing tolerance that underwent a prehardening step maintained the stomatal conductance at control level and exhibited delayed photochemical activity and RcaA expression decrease, and increased Rubisco activity, which increased net photosynthetic rate. Thus, in barley, the induction of photoinhibition avoidance (i.e., non-photochemical photoacclimation mechanism) is insufficient for an effective cold acclimation. An increase in cold-induced net photosynthetic rate due to open stomata is also necessary.

Photosynthetica, 2016

Different pigments often occur together and affect photosynthetic characteristics of the respecti... more Different pigments often occur together and affect photosynthetic characteristics of the respective leaf portions. In this study, photosynthetic activity in variegated leaves of five cultivars of the ornamental and medicinal plant, Coleus × hybridus hort., was estimated by image analysis and point data measurements of major chlorophyll (Chl) fluorescence parameters and related to the amount of photosynthetic pigments measured with a Chl meter or spectrophotometrically in leaf extracts. Significant differences in Chl and carotenoid (Car) contents were noticed among differentially pigmented sectors of a leaf and among the cultivars. Although the higher Chl concentration was noticed in purple parts compared to green parts of the leaves, the values of minimal and maximal fluorescence yield at the dark-and light-adapted state (F0, F m , F 0 ', F m ', respectively) were a little lower than those in the green sectors, indicating photoprotective effects provided by anthocyanins and Car, more abundant in the red parts. The lowest Chl and Car content was detected in creamy-yellow and pink sectors and this contributed to low F 0 , F m , and F m ', maximal quantum yield of PSII photochemistry, and nonphotochemical and photochemical quenching but high PSII maximum efficiency and effective quantum yield of PSII photochemistry. Both methods of Chl fluorescence analysis revealed heterogeneity in capture, transfer, and dissipation of excitation energy but Chl fluorescence imaging was more suitable in examining very narrow pigmented leaf areas.

Theoretical and Applied Genetics, 2013

There was a major QTL for net photosynthetic rate in the malting barley located on chromosome 5H ... more There was a major QTL for net photosynthetic rate in the malting barley located on chromosome 5H and two major QTLs for overall photochemical performance (PI) located on 5H and 7H. One major QTL related to photochemical quenching of chlorophyll fluorescence was located on chromosome 4H in fodder barley. Three QTL regions were common to both mapping populations but the corresponding regions explained different drought-induced traits. One region was for QTLs related to PSII photosynthetic activity stress index in malting barley, and the corresponding region in fodder barley was related to the water content stress index. These results are in accordance with previous studies which showed that different traits were responsible for drought tolerance variations in fodder and malting barleys.

New Biotechnology, 2016

Efficiency of a photosynthetic apparatus in plants growing in cadmium-spiked soil as well as plan... more Efficiency of a photosynthetic apparatus in plants growing in cadmium-spiked soil as well as plant biomass and cadmium accumulation were assessed in two cabbage cultivars (early and late) in a long-term pot experiment. Cadmium concentrations were 10 and 40 mg(Cd) per kg of dry mass of soil. The early cultivar showed a dose-dependent and stable decrease in SPAD index, while in plants of the late cultivar the response was reversible and less pronounced. A huge drop in the effective quantum yield of PSII photochemistry, photochemical quenching, nonphotochemical quenching, and electron transport rate in the third week of vegetation indicated susceptibility of the early cultivar to cadmium, contrary to the late one. Fresh mass of plants of the early cultivar was diminished by both doses of Cd. For the late cultivar, there was no change in these parameters, indicating its possible usability for phytoremediation, provided the reclaimed area is fenced and protected. Particular attention should also be paid towards late cultivars cabbage farming in areas with a high Cd content. On the other hand, the early cultivar may serve as a bioindicator of Cd-contamination.

E3S Web of Conferences, 2013

The chlorophyll fluorescence imaging technique is a valuable tool to study the impact of heavy me... more The chlorophyll fluorescence imaging technique is a valuable tool to study the impact of heavy metal stress in plants. The aim of this paper was to investigate the influence of Cd on photosynthetic apparatus of white cabbage (Brassica oleracea subsp. capitata f. alba) plants. Two cabbage cultivars 'Ditmarska Najwcześniejsza' ('DN'; early) and 'Amager Polana' ('AP'; late) were used. Cd was applied before planting seedlings (10 mg Cd kg-1 DM of soil).. Measurements were performed at the 3rd leaf after 2 weeks of planting. The level of Cd-induced stress to plants was estimated by chlorophyll (Chl) content (photometrically) and analyses of images and numeric values of the major fluorescence parameters of Chl (Chl fluorescence imaging system FluorCam). Cd negatively affected the chlorophyll content and Fv/Fm, Fv'/Fm', ɸ PSII and qP in leaves of early cultivar of white cabbage. However, in the case of late cv. we did not observe such distinct changes. It suggests that late cultivars. are more resistant to Cd than the early ones. Considering methodological aspect of the study, Chl fluorescence imaging can better reveal some alterations within the leaf, because numeric values of specific parameters, which are the averaged data collected from the whole leaf, cannot reflect the tissue specificity. Abbreviations: HM-heavy metal, Cd-cadmium, Chl-chlorophyll, Fv/Fm-photochemical efficiency of PSII in the dark-adapted state, F'v'/F'm'-PSII maximum efficiency, ɸ PSII-quantum efficiency of PSII electron transport, NPQ-nonphotochemical quenching of maximal Chl fluorescence, qP-photochemical quenching coefficient.

International Journal of Molecular Sciences, Mar 6, 2021

Common buckwheat (Fagopyrum esculentum Moench), a pseudocereal crop, produces a large number of f... more Common buckwheat (Fagopyrum esculentum Moench), a pseudocereal crop, produces a large number of flowers, but this does not guarantee high seed yields. This species demonstrates strong abortion of flowers and embryos. High temperatures during the generative growth phase result in an increase in the degeneration of embryo sacs. The aim of this study was to investigate proteomic changes in flowers and leaves of two common buckwheat accessions with different degrees of heat tolerance, Panda and PA15. Two-dimensional gel electrophoresis and mass spectrometry techniques were used to analyze the proteome profiles. Analyses were conducted for flower buds, open flowers capable of fertilization, and wilted flowers, as well as donor leaves, i.e., those growing closest to the inflorescences. High temperature up-regulated the expression of 182 proteins. The proteomic response to heat stress differed between the accessions and among their organs. In the Panda accession, we observed a change in abundance of 17, 13, 28, and 11 proteins, in buds, open and wilted flowers, and leaves, respectively. However, in the PA15 accession there were 34, 21, 63, and 21 such proteins, respectively. Fifteen heat-affected proteins were common to both accessions. The indole-3-glycerol phosphate synthase chloroplastic-like isoform X2 accumulated in the open flowers of the heat-sensitive cultivar Panda in response to high temperature, and may be a candidate protein as a marker of heat sensitivity in buckwheat plants.

Identification of novel, potential freezing tolerance genes in barley on the basis of QTL and association mapping

Acta Physiologiae Plantarum, 2016

The role of light in cold deacclimation of oilseed rape

Acta Physiologiae Plantarum, 2001

PLOS ONE, Dec 23, 2021

Strawberry is one of the plants sensitive to salt and alkalinity stress. Light quality affects pl... more Strawberry is one of the plants sensitive to salt and alkalinity stress. Light quality affects plant growth and metabolic activities. However, there is no clear answer in the literature on how light can improve the performance of the photosynthetic apparatus of this species under salt and alkalinity stress. The aim of this work was to investigate the effects of different spectra of supplemental light on strawberry (cv. Camarosa) under salt and alkalinity stress conditions. Light spectra of blue (with peak 460 nm), red (with peak 660 nm), blue/red (1:3), white/yellow (1:1) (400-700 nm) and ambient light were used as control. There were three stress treatments: control (no stress), alkalinity (40 mM NaHCO 3 ), and salinity (80 mM NaCl). Under stress conditions, red and red/blue light had a positive effect on CO 2 assimilation. In addition, blue/red light increased intrinsic water use efficiency (WUEi) under both stress conditions. Salinity and alkalinity stress decreased OJIP curves compared to the control treatment. Blue light caused an increase in its in plants under salinity stress, and red and blue/red light caused an increase in its in plants under alkalinity. Both salt and alkalinity stress caused a significant reduction in photosystem II (PSII) performance indices and quantum yield parameters. Adjustment of light spectra, especially red light, increased these parameters. It can be concluded that the adverse effects of salt and alkalinity stress on photosynthesis can be partially alleviated by changing the light spectra.

Journal of Applied Genetics, Sep 7, 2021

Freezing tolerance of triticale is a major trait contributing to its winter hardiness. The identi... more Freezing tolerance of triticale is a major trait contributing to its winter hardiness. The identification of genomic regionsquantitative trait loci (QTL) and molecular markers associated with freezing tolerance in winter hexaploid triticale -was the aim of this study. For that purpose, a new genetic linkage map was developed for the population of 92 doubled haploid lines derived from 'Hewo' × 'Magnat' F 1 hybrid. Those lines, together with parents were subjected to freezing tolerance test three times during two winter seasons. Plants were grown and cold-hardened under natural fall/winter conditions and then subjected to freezing in controlled conditions. Freezing tolerance was assessed as the plants recovery (REC), the electrolyte leakage (EL) from leaves and chlorophyll fluorescence parameters (JIP) after freezing. Three consistent QTL for several fluorescence parameters, electrolyte leakage, and the percentage of the survived plants were identified with composite interval mapping (CIM) and single marker analysis (SMA). The first locus Qfr.hm-7A.1 explained 9% of variation of both electrolyte leakage and plants recovery after freezing. Two QTL explaining up to 12% of variation in plants recovery and shared by selected chlorophyll fluorescence parameters were found on 4R and 5R chromosomes. Finally, main locus Qchl.hm-5A.1 was detected for chlorophyll fluorescence parameters that explained up to 19.6% of phenotypic variation. The co-located QTL on chromosomes 7A.1, 4R and 5R, clearly indicated physiological and genetic relationship of the plant survival after freezing with the ability to maintain optimal photochemical activity of the photosystem II and preservation of the cell membranes integrity. The genes located in silico within the identified QTL include those encoding BTR1-like protein, transmembrane helix proteins like potassium channel, and phosphoric ester hydrolase involved in response to osmotic stress as well as proteins involved in the regulation of the gene expression, chloroplast RNA processing, and pyrimidine salvage pathway. Additionally, our results confirm that the JIP test is a valuable tool to evaluate freezing tolerance of triticale under unstable winter environments.

Frontiers in Plant Science, Jan 9, 2019

Photosynthetic acclimation to cold conditions is an important factor influencing freezing toleran... more Photosynthetic acclimation to cold conditions is an important factor influencing freezing tolerance of plants. Photosynthetic enzyme activities increase as part of a photochemical mechanism underlying photosynthetic acclimation to low temperatures. Additionally, a non-photochemical mechanism may be activated to minimize photooxidative damage. The aim of this study was to test the hypothesis that differences in stomatal conductance in Hordeum vulgare plants with contrasting freezing tolerances induce various strategies for photosynthetic acclimation to cold stress. Different stomatal behaviors during the prehardening step resulted in diverse plant reactions to low-temperature stress. Plants with a relatively low freezing tolerance exhibited decreased stomatal conductance, resulting in decreased photochemical activity, faster induction of the non-photochemical mechanism, and downregulated expression of two Rubisco activase (RcaA) splicing variants. In contrast, plants with a relatively high freezing tolerance that underwent a prehardening step maintained the stomatal conductance at control level and exhibited delayed photochemical activity and RcaA expression decrease, and increased Rubisco activity, which increased net photosynthetic rate. Thus, in barley, the induction of photoinhibition avoidance (i.e., non-photochemical photoacclimation mechanism) is insufficient for an effective cold acclimation. An increase in cold-induced net photosynthetic rate due to open stomata is also necessary.

Functional Plant Biology, 2016

Increased precipitation and snowmelt during warmer winters may lead to low-temperature waterloggi... more Increased precipitation and snowmelt during warmer winters may lead to low-temperature waterlogging of plants. Perennial ryegrass (Lolium perenne L.) is one of the most important cool-season grasses in agriculture. It is well adapted to cold climates, and may be considered as a model system for studying the mechanisms involved in cold acclimation. The aim of this study was to evaluate the effects of waterlogging on photosynthetic acclimation to cold in perennial ryegrass. Two L. perenne genotypes that differ in their responses to waterlogging in terms of freezing tolerance were compared. We evaluated the effects of waterlogging during cold acclimation on the water-soluble carbohydrate concentration, ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) activity, photochemical efficiency of PSII, and transcript levels of the Rubisco activase (RcaA) and sucrose-sucrose fructosyltransferase (1-SST) genes. The genotype that did not accumulate water-soluble carbohydrates in the leaf under waterlogging showed a lower degree of feedback inhibition of photosynthesis under low temperature, and activated a photochemical mechanism of photosynthetic acclimation to cold. The other genotype accumulated water-soluble carbohydrates in the leaf during waterlogging, and activated a non-photochemical mechanism under cold conditions. Different photosynthetic acclimation systems to cold under waterlogging may be activated in these two contrasting L. perenne genotypes.

Agriculture

Remote sensing methods based on UAV and hand-held devices as well have been used to assess the re... more Remote sensing methods based on UAV and hand-held devices as well have been used to assess the response to nitrogen and sulfur fertilization of hypoallergenic genotypes of winter wheat. The field experiment was conducted using the split-split-plot design with three repetitions. The first factor was the two genotypes of winter wheat specified as V1 (without allergic protein) and V2 (with allergic protein), and the second factor was three doses of sulfur fertilization: 0, 20 and 40 kg S per ha. The third factor consisted of six doses of nitrogen fertilization: 0, 40, 60, 80, 100 and 120 kg N·ha−1. Monitoring the values of the indicators depending on the level of nitrogen and sulfur fertilization allowed the results to be used in yield forecasting, assessment of plant condition, LAI value, nutritional status in the cultivation of wheat. The maximum yield should be expected at doses of 94 and 101 kg N ha−1 for genotypes V1 and V2, respectively, giving yields of 5.39 and 4.71 Mg ha−1. On...

Mapping of QTL and candidate genes associated with powdery mildew resistance in triticale (× Triticosecale Wittm.)

Plant Growth Regulation

The effect of early growth conditions on frost resistance of winter oilseed rape (Brassica napus ssp.oleifera)

Triticale is a cereal of high economic importance, however along with the increase in the area of... more Triticale is a cereal of high economic importance, however along with the increase in the area of this cereal, it is more often infected by the fungal pathogen Blumeria graminis, which causes powdery mildew. The rapid development of molecular biology techniques, in particular methods based on molecular markers may be an important tool used in modern plant breeding. Development of genetic maps, location of the QTLs defining the region of the genome associated with resistance and selection of markers linked to particular trait can be used to select resistant genotypes as well as to pyramidize several resistance genes in one variety. In this paper we present a new, high-density genetic map of triticale doubled haploids (DH) population ‘Grenado’ x ‘Zorro’ composed of DArT, silicoDArT and SNP markers. Composite interval mapping method was used to detect eight QTL regions associated with the area under disease progress curve (AUDPC) and 15 regions with the average value of powdery mildew ...

International Journal of Molecular Sciences, 2020

Though winter-hardiness is a complex trait, freezing tolerance was proved to be its main componen... more Though winter-hardiness is a complex trait, freezing tolerance was proved to be its main component. Species from temperate regions acquire tolerance to freezing in a process of cold acclimation, which is associated with the exposure of plants to low but non-freezing temperatures. However, mechanisms of cold acclimation in Lolium-Festuca grasses, important for forage production in Europe, have not been fully recognized. Thus, two L. multiflorum/F. arundinacea introgression forms with distinct freezing tolerance were used herein as models in the comprehensive research to dissect these mechanisms in that group of plants. The work was focused on: (i) analysis of cellular membranes’ integrity; (ii) analysis of plant photosynthetic capacity (chlorophyll fluorescence; gas exchange; gene expression, protein accumulation, and activity of selected enzymes of the Calvin cycle); (iii) analysis of plant antioxidant capacity (reactive oxygen species generation; gene expression, protein accumulati...

Cereal Research Communications, 2019

The increasing economic importance of triticale (×Triticosecale Wittm.) makes this synthetic hybr... more The increasing economic importance of triticale (×Triticosecale Wittm.) makes this synthetic hybrid cereal an interesting object of genetic studies. Genomic regions (QTL) of morphological winter triticale traits were determined using the mapping population of 89 doubled haploids lines (DHs) developed from F 1 hybrid of cv. 'Hewo' and cv. 'Magnat' accompanied with the genetic map consisting of 20 linkage groups assigned to the A (7), B (7), and R ( ) genomes (total of 3539 DArT, SNP-DArT and SSR markers, length of 4997.4 cM). Five independent experiments were performed in the field and greenhouse controlled conditions. A total of 12 major QTLs located on 2B, 5A, 5R, and 6B chromosomes connected to the stem length, the plant height, the spike length, the number of the productive spikelets per spike, the number of grains per spike, and the thousand kernel weight were identified by a composite interval mapping (CIM).

Sensors, 2019

Perennial ryegrass (Lolium perenne L.) belongs to the common cultivated grass species in Central ... more Perennial ryegrass (Lolium perenne L.) belongs to the common cultivated grass species in Central and Western Europe. Despite being considered to be susceptible to drought, it is frequently used for forming the turf in urban green areas. In such areas, the water deficit in soil is recognized as one of the most important environmental factors, which can limit plant growth. The basic aim of this work was to explore the mechanisms standing behind the changes in the photosynthetic apparatus performance of two perennial ryegrass turf varieties grown under drought stress using comprehensive in vivo chlorophyll fluorescence signal analyses and plant gas exchange measurements. Drought was applied after eight weeks of sowing by controlling the humidity of the roots ground medium at the levels of 30, 50, and 70% of the field water capacity. Measurements were carried out at four times: 0, 120, and 240 h after drought application and after recovery (refilling water to 70%). We found that the dif...

Frontiers in Plant Science, 2019

One hundred and nine accessions of spring barley seedlings were phenotyped under soil drought con... more One hundred and nine accessions of spring barley seedlings were phenotyped under soil drought conditions. Chlorophyll fluorescence induction (OJIP) parameters, leaf water content, relative turgidity, net assimilation rate (P N ), and water use efficiency (WUE) of plants were measured. All the tested lines were genotyped by means of DArT sequencing (DArTseq) technology. For association mapping a 11,780 polymorphic DArTseq and 4,725 DArTseq SNP markers were used. Our results revealed dissimilar patterns of the relationships between OJIP-parameters under control and drought conditions. A high level of correlation between parameters characterizing Photosystem's II (PSII) energy trapping efficiency (F v /F m ) and photochemical events downstream of PSII reaction center (e.g., Performance Index-PI CSo ) was observed only in the case of drought-treated plants. Generally, OJIP parameters were correlated with leaf water content (less in control). This correlation was weaker with WUE, and absent with P N . Under drought stress, 6,252 genotype × phenotype associations, which passed false discovery rate (FDR) verification, were found between all the studied phenotypic characteristics (23, including 19 OJIP parameters) and 2,721 markers. On the other hand, only 282 associations passed FDR test in the control. They comprised 22 phenotypic parameters and 205 markers. Probing for gene annotations of sequences was performed for markers associated with F v /F m for both drought and control, markers were associated with studied traits in both control and drought, as well as for markers associated with both OJIP and other physiological parameters in drought. Our work allowed us to conclude that drought treatment differentiates the studied lines through the revealing of relationships between water content and the damages to PSII reaction centers or different components of PSII energy transfer chain. Moreover, the former was not connected with net photosynthesis rate.

Frontiers in Plant Science, 2019

Photosynthetic acclimation to cold conditions is an important factor influencing freezing toleran... more Photosynthetic acclimation to cold conditions is an important factor influencing freezing tolerance of plants. Photosynthetic enzyme activities increase as part of a photochemical mechanism underlying photosynthetic acclimation to low temperatures. Additionally, a non-photochemical mechanism may be activated to minimize photooxidative damage. The aim of this study was to test the hypothesis that differences in stomatal conductance in Hordeum vulgare plants with contrasting freezing tolerances induce various strategies for photosynthetic acclimation to cold stress. Different stomatal behaviors during the prehardening step resulted in diverse plant reactions to low-temperature stress. Plants with a relatively low freezing tolerance exhibited decreased stomatal conductance, resulting in decreased photochemical activity, faster induction of the non-photochemical mechanism, and downregulated expression of two Rubisco activase (RcaA) splicing variants. In contrast, plants with a relatively high freezing tolerance that underwent a prehardening step maintained the stomatal conductance at control level and exhibited delayed photochemical activity and RcaA expression decrease, and increased Rubisco activity, which increased net photosynthetic rate. Thus, in barley, the induction of photoinhibition avoidance (i.e., non-photochemical photoacclimation mechanism) is insufficient for an effective cold acclimation. An increase in cold-induced net photosynthetic rate due to open stomata is also necessary.

Photosynthetica, 2016

Different pigments often occur together and affect photosynthetic characteristics of the respecti... more Different pigments often occur together and affect photosynthetic characteristics of the respective leaf portions. In this study, photosynthetic activity in variegated leaves of five cultivars of the ornamental and medicinal plant, Coleus × hybridus hort., was estimated by image analysis and point data measurements of major chlorophyll (Chl) fluorescence parameters and related to the amount of photosynthetic pigments measured with a Chl meter or spectrophotometrically in leaf extracts. Significant differences in Chl and carotenoid (Car) contents were noticed among differentially pigmented sectors of a leaf and among the cultivars. Although the higher Chl concentration was noticed in purple parts compared to green parts of the leaves, the values of minimal and maximal fluorescence yield at the dark-and light-adapted state (F0, F m , F 0 ', F m ', respectively) were a little lower than those in the green sectors, indicating photoprotective effects provided by anthocyanins and Car, more abundant in the red parts. The lowest Chl and Car content was detected in creamy-yellow and pink sectors and this contributed to low F 0 , F m , and F m ', maximal quantum yield of PSII photochemistry, and nonphotochemical and photochemical quenching but high PSII maximum efficiency and effective quantum yield of PSII photochemistry. Both methods of Chl fluorescence analysis revealed heterogeneity in capture, transfer, and dissipation of excitation energy but Chl fluorescence imaging was more suitable in examining very narrow pigmented leaf areas.

Theoretical and Applied Genetics, 2013

There was a major QTL for net photosynthetic rate in the malting barley located on chromosome 5H ... more There was a major QTL for net photosynthetic rate in the malting barley located on chromosome 5H and two major QTLs for overall photochemical performance (PI) located on 5H and 7H. One major QTL related to photochemical quenching of chlorophyll fluorescence was located on chromosome 4H in fodder barley. Three QTL regions were common to both mapping populations but the corresponding regions explained different drought-induced traits. One region was for QTLs related to PSII photosynthetic activity stress index in malting barley, and the corresponding region in fodder barley was related to the water content stress index. These results are in accordance with previous studies which showed that different traits were responsible for drought tolerance variations in fodder and malting barleys.

New Biotechnology, 2016

Efficiency of a photosynthetic apparatus in plants growing in cadmium-spiked soil as well as plan... more Efficiency of a photosynthetic apparatus in plants growing in cadmium-spiked soil as well as plant biomass and cadmium accumulation were assessed in two cabbage cultivars (early and late) in a long-term pot experiment. Cadmium concentrations were 10 and 40 mg(Cd) per kg of dry mass of soil. The early cultivar showed a dose-dependent and stable decrease in SPAD index, while in plants of the late cultivar the response was reversible and less pronounced. A huge drop in the effective quantum yield of PSII photochemistry, photochemical quenching, nonphotochemical quenching, and electron transport rate in the third week of vegetation indicated susceptibility of the early cultivar to cadmium, contrary to the late one. Fresh mass of plants of the early cultivar was diminished by both doses of Cd. For the late cultivar, there was no change in these parameters, indicating its possible usability for phytoremediation, provided the reclaimed area is fenced and protected. Particular attention should also be paid towards late cultivars cabbage farming in areas with a high Cd content. On the other hand, the early cultivar may serve as a bioindicator of Cd-contamination.

E3S Web of Conferences, 2013

The chlorophyll fluorescence imaging technique is a valuable tool to study the impact of heavy me... more The chlorophyll fluorescence imaging technique is a valuable tool to study the impact of heavy metal stress in plants. The aim of this paper was to investigate the influence of Cd on photosynthetic apparatus of white cabbage (Brassica oleracea subsp. capitata f. alba) plants. Two cabbage cultivars 'Ditmarska Najwcześniejsza' ('DN'; early) and 'Amager Polana' ('AP'; late) were used. Cd was applied before planting seedlings (10 mg Cd kg-1 DM of soil).. Measurements were performed at the 3rd leaf after 2 weeks of planting. The level of Cd-induced stress to plants was estimated by chlorophyll (Chl) content (photometrically) and analyses of images and numeric values of the major fluorescence parameters of Chl (Chl fluorescence imaging system FluorCam). Cd negatively affected the chlorophyll content and Fv/Fm, Fv'/Fm', ɸ PSII and qP in leaves of early cultivar of white cabbage. However, in the case of late cv. we did not observe such distinct changes. It suggests that late cultivars. are more resistant to Cd than the early ones. Considering methodological aspect of the study, Chl fluorescence imaging can better reveal some alterations within the leaf, because numeric values of specific parameters, which are the averaged data collected from the whole leaf, cannot reflect the tissue specificity. Abbreviations: HM-heavy metal, Cd-cadmium, Chl-chlorophyll, Fv/Fm-photochemical efficiency of PSII in the dark-adapted state, F'v'/F'm'-PSII maximum efficiency, ɸ PSII-quantum efficiency of PSII electron transport, NPQ-nonphotochemical quenching of maximal Chl fluorescence, qP-photochemical quenching coefficient.