Jeremiah Doody | University of South Florida (original) (raw)

Papers by Jeremiah Doody

Research paper thumbnail of Draco Beccarii (Beccar's flying dragon). Nesting

Research paper thumbnail of Patterns of predation in Pig-nosed turtles

Research paper thumbnail of Embryonic mortality as a cost of communal nesting in the delicate skink

Journal of Zoology, Oct 26, 2010

ABSTRACT Abstract Lizards are appropriate organisms to investigate causes and correlates of commu... more ABSTRACT Abstract Lizards are appropriate organisms to investigate causes and correlates of communal egg laying because their general lack of parental care focuses attention on nest site choice. We field-tested hypotheses associated with nest site choice and communal egg laying in the delicate skink Lampropholis delicata, in south-eastern Australia. Specifically, we predicted that lizards would nest at sites with lower openness and solar radiation than random sites, but within crevices with higher humidity than random crevices. However, we predicted that these environmental factors would not differ between communal and solitary nest sites (based on previous research), but that egg mortality in communal nests would be higher than that in solitary nests due to conspecific interference. Despite being ground dwellers, skinks in this population nested above the ground level in narrow horizontal crevices within vertical faces of sandstone outcrops. At the broadest scale, skinks nested at sites with significantly lower canopy openness and incident (solar) radiation than random sites, while at the smallest scale, skinks nested in crevices with significantly higher relative humidity than potential nest crevices. Humidity averaged 94% in nest sites, and nesting females did not trade-off humidity for temperature, despite an inverse relationship between the two at potential nest sites. Of 60 nests, about half to two-thirds were communal. Communal nest sites did not differ from solitary nest sites with respect to temperature, humidity, rock size, aspect, height of crevice above ground, or crevice dimensions. Eggs from communal nests were three times more likely to desiccate and perish than eggs from solitary nests, a clear cost of communal nesting. Desiccation was caused by eggs being displaced from their original positions within the crevices, possibly by conspecific gravid females.

Research paper thumbnail of Evidence for Environmentally-cued Hatching in Reptiles

Research paper thumbnail of An Efficient Marking Technique for Softshelled Turtles

Herpetological review, 1992

Research paper thumbnail of Social Behaviour as a Challenge for Welfare

Research paper thumbnail of Examining the Octopus joubini species complex (Cephalopoda: Octopodidae) in the northeastern Gulf of Mexico

Marine Biodiversity, May 27, 2023

Research paper thumbnail of Black box and attics: Habitat selection and resource use by large threatened pythons in landscapes with contrasting human modification

Austral Ecology, Jul 14, 2015

Woodland and forest degradation, driven predominately by agricultural and pastoral production, is... more Woodland and forest degradation, driven predominately by agricultural and pastoral production, is a crisis facing many species globally, in particular hollow‐dependent fauna. Large predatory species play important roles in both ecosystems and conservation strategies, but few studies have examined habitat selection of such species in intensively human‐modified landscapes. We quantified habitat selection and resource use by a large, top‐order and threatened snake (carpet python, Morelia spilota), between adjacent areas of high and low anthropogenic modification in inland Australia, a region that has undergone considerable alteration since European settlement. At the low‐impact site, snakes preferred tree hollows and a structurally complex understorey, whereas at the high‐impact site, snakes preferred homestead attics. Based on the decline of the species in this region, however, high‐impact landscapes may only support snakes when they are adjacent to low‐impact habitats. Invasive species comprised a large part of snake diets in both landscape types. Carpet pythons, with large home ranges and habitat requirements that overlap with many smaller threatened mammalian and avian fauna, are generally well liked and easily identifiable by rural landholders. Accordingly, they may play a key role in conservation strategies aimed at the protection of woodland and hollow‐dependent fauna in heavily modified landscapes of Australia's inland regions. However, invasive species, which tend to contribute to declines in native species inhabiting arid and semi‐arid Australia, are beneficial and important to pythons. Our study therefore highlights the diversity of effects that two major threats to biodiversity – habitat loss and invasive species – can have on different species within the same ecosystem.

Research paper thumbnail of Why Animals Construct Helical Burrows: Construction vs. Post-Construction Benefits

Authorea (Authorea), Apr 17, 2023

Research paper thumbnail of The evolution of sociality and the polyvagal theory

Research paper thumbnail of Successful Predation of Invasive South American Cane Toads (Rhinella Marina) by Southern Watersnakes (Nerodia Fasciata)

South American Cane Toads (Rhinella marina) have been introduced into several regions outside of ... more South American Cane Toads (Rhinella marina) have been introduced into several regions outside of their native distribution. Outside of their native range, few predators have been documented preying upon R.marina due to their potent toxins secreted in defense. However, prevalence of a toxin resistance gene makes it possible for some snakes of the sub-family Natricinae to consume native toads. We documented successful consumption of the invasive cane toad by the Southern Watersnake (Nerodia fasciata) in southwest Florida, both in the wild and in the laboratory. Southern Watersnakes from populations that existed both with and without cane toads successfully consumed toad prey without obvious ill-effect. Southern Watersnakes in southwest Florida are thus resistant to, and readily consume cane toads, an otherwise relatively predator-free invasive species in Florida. More dietary field data and controlled experiments that measure resistance to multiple prey items, sizes, and frequency wil...

Research paper thumbnail of The Secret Social Lives of Reptiles

Research paper thumbnail of Biological control of the cane toad in Australia: a review

Animal Conservation, 2010

The marine toad Bufo marinus is native to northern South America, parts of Central America and So... more The marine toad Bufo marinus is native to northern South America, parts of Central America and Southern Texas. It was deliberately introduced into Australia's tropical north‐east in 1935 in an unsuccessful attempt to control the cane beetle, a damaging insect pest of sugarcane crops. The toads quickly established in the new environment and began to spread. Today, they inhabit most of the Australian tropics and sub‐tropics and have reached Western Australia. Models predict that global warming will enable the toads to extend their range further south. They cause severe environmental impacts, as all life stages of B. marinus contain bufadienolides, alkaloid substances toxic to vertebrates, resulting in death of the predators ingesting it. The continental scale of this biological invasion in combination with the remoteness of the areas affected, poses a specific set of challenges to potential control approaches for cane toads. This review covers different biocontrol strategies pursu...

Research paper thumbnail of Emergence of field-based underwater video for understanding the ecology of freshwater fishes and crustaceans in Australia

Research paper thumbnail of Can Reptiles Use Nest Site Choice Behavior to Counter Global Warming Effects on Developing Embryos? Potential Climate Responses in a Turtle

Frontiers in Ecology and Evolution, Mar 15, 2022

Research paper thumbnail of Invasional meltdown-under? Toads facilitate cats by removing a naïve top predator

Research paper thumbnail of The ecology and evolution of temperature-dependent reaction norms for sex determination in reptiles: a mechanistic conceptual model

Biological Reviews, Jun 14, 2016

Sex-determining mechanisms are broadly categorised as being based on either genetic or environmen... more Sex-determining mechanisms are broadly categorised as being based on either genetic or environmental factors. Vertebrate sex determination exhibits remarkable diversity but displays distinct phylogenetic patterns. While all eutherian mammals possess XY male heterogamety and female heterogamety (ZW) is ubiquitous in birds, poikilothermic vertebrates (fish, amphibians and reptiles) exhibit multiple genetic sex-determination (GSD) systems as well as environmental sex determination (ESD). Temperature is the factor controlling ESD in reptiles and temperature-dependent sex determination (TSD) in reptiles has become a focal point in the study of this phenomenon. Current patterns of climate change may cause detrimental skews in the population sex ratios of reptiles exhibiting TSD. Understanding the patterns of variation, both within and among populations and linking such patterns with the selection processes they are associated with, is the central challenge of research aimed at predicting the capacity of populations to adapt to novel conditions. Here we present a conceptual model that innovates by defining an individual reaction norm for sex determination as a range of incubation temperatures. By deconstructing individual reaction norms for TSD and revealing their underlying interacting elements, we offer a conceptual solution that explains how variation among individual reaction norms can be inferred from the pattern of population reaction norms. The model also links environmental variation with the different patterns of TSD and describes the processes from which they may arise. Specific climate scenarios are singled out as eco-evolutionary traps that may lead to demographic extinction or a transition to either male or female heterogametic GSD. We describe how the conceptual principles can be applied to interpret TSD data and to explain the adaptive capacity of TSD to climate change as well as its limits and the potential applications for conservation and management programs.

Research paper thumbnail of Canal structure influences watersnake assemblage structure in an urban environment

Research Square (Research Square), Sep 21, 2022

Research paper thumbnail of The Impact of ATVs on Survival of Softshell Turtle (Apalone spp.) Nests

Journal of Herpetology, Jun 11, 2021

Abstract. Recreational activities can be detrimental to biodiversity; for example, off-road vehic... more Abstract. Recreational activities can be detrimental to biodiversity; for example, off-road vehicle traffic (e.g., ATV riding), which has become increasingly popular in recent decades, can threaten wildlife. Although ATV riding around wetlands may threaten the shallow nests of turtles, there are no data on the effect of ATVs on turtle nests. We studied nest site choice and nest survival in two species of softshell turtles (Apalone mutica and A. spinifera) along a river in Louisiana before (1993–1994) and after (2015–2016) ATV riding became popular at the site to determine whether ATVs were an important source of nest mortality, and whether there was an effect of nest site choice on nest survival. ATVs were the most common source of nest mortality (one-third of nests destroyed); nest mortality was significantly positively related to increased ATV traffic but was not influenced by species or nest site choice. Experiments with surrogate eggs and an ATV revealed that the most vulnerable nests to ATV mortality were those that were shallower, were driven over more slowly, and were turned upon. We recommend restricting the access of riding clubs to the river; enforcement of regulations on isolated riders from adjacent residential areas will be logistically and financially challenging.

Research paper thumbnail of In the post-COVID-19 era, is the illegal wildlife trade the most serious form of trafficking?

Crime Science, Sep 13, 2021

Research paper thumbnail of Draco Beccarii (Beccar's flying dragon). Nesting

Research paper thumbnail of Patterns of predation in Pig-nosed turtles

Research paper thumbnail of Embryonic mortality as a cost of communal nesting in the delicate skink

Journal of Zoology, Oct 26, 2010

ABSTRACT Abstract Lizards are appropriate organisms to investigate causes and correlates of commu... more ABSTRACT Abstract Lizards are appropriate organisms to investigate causes and correlates of communal egg laying because their general lack of parental care focuses attention on nest site choice. We field-tested hypotheses associated with nest site choice and communal egg laying in the delicate skink Lampropholis delicata, in south-eastern Australia. Specifically, we predicted that lizards would nest at sites with lower openness and solar radiation than random sites, but within crevices with higher humidity than random crevices. However, we predicted that these environmental factors would not differ between communal and solitary nest sites (based on previous research), but that egg mortality in communal nests would be higher than that in solitary nests due to conspecific interference. Despite being ground dwellers, skinks in this population nested above the ground level in narrow horizontal crevices within vertical faces of sandstone outcrops. At the broadest scale, skinks nested at sites with significantly lower canopy openness and incident (solar) radiation than random sites, while at the smallest scale, skinks nested in crevices with significantly higher relative humidity than potential nest crevices. Humidity averaged 94% in nest sites, and nesting females did not trade-off humidity for temperature, despite an inverse relationship between the two at potential nest sites. Of 60 nests, about half to two-thirds were communal. Communal nest sites did not differ from solitary nest sites with respect to temperature, humidity, rock size, aspect, height of crevice above ground, or crevice dimensions. Eggs from communal nests were three times more likely to desiccate and perish than eggs from solitary nests, a clear cost of communal nesting. Desiccation was caused by eggs being displaced from their original positions within the crevices, possibly by conspecific gravid females.

Research paper thumbnail of Evidence for Environmentally-cued Hatching in Reptiles

Research paper thumbnail of An Efficient Marking Technique for Softshelled Turtles

Herpetological review, 1992

Research paper thumbnail of Social Behaviour as a Challenge for Welfare

Research paper thumbnail of Examining the Octopus joubini species complex (Cephalopoda: Octopodidae) in the northeastern Gulf of Mexico

Marine Biodiversity, May 27, 2023

Research paper thumbnail of Black box and attics: Habitat selection and resource use by large threatened pythons in landscapes with contrasting human modification

Austral Ecology, Jul 14, 2015

Woodland and forest degradation, driven predominately by agricultural and pastoral production, is... more Woodland and forest degradation, driven predominately by agricultural and pastoral production, is a crisis facing many species globally, in particular hollow‐dependent fauna. Large predatory species play important roles in both ecosystems and conservation strategies, but few studies have examined habitat selection of such species in intensively human‐modified landscapes. We quantified habitat selection and resource use by a large, top‐order and threatened snake (carpet python, Morelia spilota), between adjacent areas of high and low anthropogenic modification in inland Australia, a region that has undergone considerable alteration since European settlement. At the low‐impact site, snakes preferred tree hollows and a structurally complex understorey, whereas at the high‐impact site, snakes preferred homestead attics. Based on the decline of the species in this region, however, high‐impact landscapes may only support snakes when they are adjacent to low‐impact habitats. Invasive species comprised a large part of snake diets in both landscape types. Carpet pythons, with large home ranges and habitat requirements that overlap with many smaller threatened mammalian and avian fauna, are generally well liked and easily identifiable by rural landholders. Accordingly, they may play a key role in conservation strategies aimed at the protection of woodland and hollow‐dependent fauna in heavily modified landscapes of Australia's inland regions. However, invasive species, which tend to contribute to declines in native species inhabiting arid and semi‐arid Australia, are beneficial and important to pythons. Our study therefore highlights the diversity of effects that two major threats to biodiversity – habitat loss and invasive species – can have on different species within the same ecosystem.

Research paper thumbnail of Why Animals Construct Helical Burrows: Construction vs. Post-Construction Benefits

Authorea (Authorea), Apr 17, 2023

Research paper thumbnail of The evolution of sociality and the polyvagal theory

Research paper thumbnail of Successful Predation of Invasive South American Cane Toads (Rhinella Marina) by Southern Watersnakes (Nerodia Fasciata)

South American Cane Toads (Rhinella marina) have been introduced into several regions outside of ... more South American Cane Toads (Rhinella marina) have been introduced into several regions outside of their native distribution. Outside of their native range, few predators have been documented preying upon R.marina due to their potent toxins secreted in defense. However, prevalence of a toxin resistance gene makes it possible for some snakes of the sub-family Natricinae to consume native toads. We documented successful consumption of the invasive cane toad by the Southern Watersnake (Nerodia fasciata) in southwest Florida, both in the wild and in the laboratory. Southern Watersnakes from populations that existed both with and without cane toads successfully consumed toad prey without obvious ill-effect. Southern Watersnakes in southwest Florida are thus resistant to, and readily consume cane toads, an otherwise relatively predator-free invasive species in Florida. More dietary field data and controlled experiments that measure resistance to multiple prey items, sizes, and frequency wil...

Research paper thumbnail of The Secret Social Lives of Reptiles

Research paper thumbnail of Biological control of the cane toad in Australia: a review

Animal Conservation, 2010

The marine toad Bufo marinus is native to northern South America, parts of Central America and So... more The marine toad Bufo marinus is native to northern South America, parts of Central America and Southern Texas. It was deliberately introduced into Australia's tropical north‐east in 1935 in an unsuccessful attempt to control the cane beetle, a damaging insect pest of sugarcane crops. The toads quickly established in the new environment and began to spread. Today, they inhabit most of the Australian tropics and sub‐tropics and have reached Western Australia. Models predict that global warming will enable the toads to extend their range further south. They cause severe environmental impacts, as all life stages of B. marinus contain bufadienolides, alkaloid substances toxic to vertebrates, resulting in death of the predators ingesting it. The continental scale of this biological invasion in combination with the remoteness of the areas affected, poses a specific set of challenges to potential control approaches for cane toads. This review covers different biocontrol strategies pursu...

Research paper thumbnail of Emergence of field-based underwater video for understanding the ecology of freshwater fishes and crustaceans in Australia

Research paper thumbnail of Can Reptiles Use Nest Site Choice Behavior to Counter Global Warming Effects on Developing Embryos? Potential Climate Responses in a Turtle

Frontiers in Ecology and Evolution, Mar 15, 2022

Research paper thumbnail of Invasional meltdown-under? Toads facilitate cats by removing a naïve top predator

Research paper thumbnail of The ecology and evolution of temperature-dependent reaction norms for sex determination in reptiles: a mechanistic conceptual model

Biological Reviews, Jun 14, 2016

Sex-determining mechanisms are broadly categorised as being based on either genetic or environmen... more Sex-determining mechanisms are broadly categorised as being based on either genetic or environmental factors. Vertebrate sex determination exhibits remarkable diversity but displays distinct phylogenetic patterns. While all eutherian mammals possess XY male heterogamety and female heterogamety (ZW) is ubiquitous in birds, poikilothermic vertebrates (fish, amphibians and reptiles) exhibit multiple genetic sex-determination (GSD) systems as well as environmental sex determination (ESD). Temperature is the factor controlling ESD in reptiles and temperature-dependent sex determination (TSD) in reptiles has become a focal point in the study of this phenomenon. Current patterns of climate change may cause detrimental skews in the population sex ratios of reptiles exhibiting TSD. Understanding the patterns of variation, both within and among populations and linking such patterns with the selection processes they are associated with, is the central challenge of research aimed at predicting the capacity of populations to adapt to novel conditions. Here we present a conceptual model that innovates by defining an individual reaction norm for sex determination as a range of incubation temperatures. By deconstructing individual reaction norms for TSD and revealing their underlying interacting elements, we offer a conceptual solution that explains how variation among individual reaction norms can be inferred from the pattern of population reaction norms. The model also links environmental variation with the different patterns of TSD and describes the processes from which they may arise. Specific climate scenarios are singled out as eco-evolutionary traps that may lead to demographic extinction or a transition to either male or female heterogametic GSD. We describe how the conceptual principles can be applied to interpret TSD data and to explain the adaptive capacity of TSD to climate change as well as its limits and the potential applications for conservation and management programs.

Research paper thumbnail of Canal structure influences watersnake assemblage structure in an urban environment

Research Square (Research Square), Sep 21, 2022

Research paper thumbnail of The Impact of ATVs on Survival of Softshell Turtle (Apalone spp.) Nests

Journal of Herpetology, Jun 11, 2021

Abstract. Recreational activities can be detrimental to biodiversity; for example, off-road vehic... more Abstract. Recreational activities can be detrimental to biodiversity; for example, off-road vehicle traffic (e.g., ATV riding), which has become increasingly popular in recent decades, can threaten wildlife. Although ATV riding around wetlands may threaten the shallow nests of turtles, there are no data on the effect of ATVs on turtle nests. We studied nest site choice and nest survival in two species of softshell turtles (Apalone mutica and A. spinifera) along a river in Louisiana before (1993–1994) and after (2015–2016) ATV riding became popular at the site to determine whether ATVs were an important source of nest mortality, and whether there was an effect of nest site choice on nest survival. ATVs were the most common source of nest mortality (one-third of nests destroyed); nest mortality was significantly positively related to increased ATV traffic but was not influenced by species or nest site choice. Experiments with surrogate eggs and an ATV revealed that the most vulnerable nests to ATV mortality were those that were shallower, were driven over more slowly, and were turned upon. We recommend restricting the access of riding clubs to the river; enforcement of regulations on isolated riders from adjacent residential areas will be logistically and financially challenging.

Research paper thumbnail of In the post-COVID-19 era, is the illegal wildlife trade the most serious form of trafficking?

Crime Science, Sep 13, 2021