Network Analysis for MS-based Proteomics Experiments (original) (raw)

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This package provides a suite of functions to query various network databases, filter queries & results, and visualize networks.

Installation Instructions

To install this package on bioconductor, run the following command:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MSstatsBioNet")

You can install the development version of this package through Github:

devtools::install_github("Vitek-Lab/MSstatsConvert", build_vignettes = TRUE)

License

This package is distributed under the Artistic-2.0 license. However, its dependencies may have different licenses.

Notably, INDRA is distributed under the BSD 2-Clause license. Furthermore, INDRA’s knowledge sources may have different licenses for commercial applications. Please refer to the INDRA README for more information on its knowledge sources and their associated licenses.

Databases Supported

Filtering Options Supported

Visualization Options Supported