On the use of algorithms to discover motifs in DNA sequences (original) (raw)
Related papers
Optimal Algorithm for Finding Dna Motifs with Nucleotide Adjacent Dependency
Proceedings of the 6th Asia-Pacific Bioinformatics Conference, 2007
An Efficient Combinatorial Approach for Solving the DNA Motif Finding Problem
2009
Supervised Detection of Regulatory Motifs in DNA Sequences
Statistical Applications in Genetics and Molecular Biology, 2003
New scoring schema for finding motifs in DNA Sequences
BMC Bioinformatics, 2009
An Efficient Algorithm for Discovering Motifs in Large DNA Data Sets
Finding common motifs in DNA sequences: a survey
2005
2010
GAMOT: An efficient genetic algorithm for finding challenging motifs in DNA sequences
2006
EMD: an ensemble algorithm for discovering regulatory motifs in DNA sequences
BMC Bioinformatics, 2006
Motif Finding with Application to the Transcription Factor Binding Sites Problem
International Journal of Computer Applications, 2015
Finding motifs from all sequences with and without binding sites
Bioinformatics, 2006
Approximate Algorithms for Regulatory Motif Discovery in DNA
2019
Towards a More Efficient Discovery of Biologically Significant DNA Motifs
Lecture Notes in Computer Science, 2015
An Automaton for Motifs Recognition in DNA Sequences
Lecture Notes in Computer Science, 2009
Finding motifs for insufficient number of sequences with strong binding to transcription facto
Proceedings of the eighth annual international conference on Computational molecular biology - RECOMB '04, 2004
Supervised Detection of Conserved Motifs in DNA Sequences with Cosmo
Statistical Applications in Genetics and Molecular Biology, 2007
Discovering Motifs with Transcription Factor Domain Knowledge
Biocomputing 2007 - Proceedings of the Pacific Symposium, 2006
Methods for discovery and characterization of DNA sequence motifs
Bioinformatics a Swiss Perspective, 2009
A survey of exact motif finding algorithms
Indonesian Journal of Electrical Engineering and Computer Science
Motif Discovery in Protein Sequences
Pattern Recognition - Analysis and Applications, 2016
On the High Performance Computing for Motif Discovery in Dna Sequences
International Journal of Advanced Research, 2018
DNA Motif Representation with Nucleotide Dependency
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2008
qPMS7: A Fast Algorithm for Finding (ℓ, d)-Motifs in DNA and Protein Sequences
PLoS ONE, 2012
Subtle Motif Discovery for Detection of Dna Regulatory Sites
Proceedings of the 5th Asia-Pacific Bioinformatics Conference, 2007
Detecting DNA regulatory motifs by incorporating positional trends in information content
Genome biology, 2004
A novel ensemble learning method for de novo computational identification of DNA binding sites
BMC Bioinformatics, 2007
A Comparative Study of Motif Detection Tools
BMC Bioinformatics, 2008
Automatic extraction of motifs represented in the hidden Markov model from a number of DNA sequences
Bioinformatics, 1998
DNA Motif Databases and Their Uses
Current Protocols in Bioinformatics, 2015
DNA Motif Discovery Based on Ant Colony Optimization and Expectation Maximization
2011
Combinatorial motif analysis and hypothesis generation on a genomic scale
Bioinformatics, 2000