Advances in vibrational spectroscopy as a sensitive probe of peptide and protein structure:: A critical review (original) (raw)

Vibrational analysis of peptides, polypeptides, and proteins: Characteristic amide bands of β-turns

Jagdeesh Bandekar

Proceedings of the National …, 1979

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Vibrational analysis of peptides, polypeptides, and proteins

Jagdeesh Bandekar

International Journal of Peptide and …, 1985

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Vibrational Analysis of Peptides, Polypeptides

pradeep sengupta

2016

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Vibrational Spectroscopy Toolbox & Applications: Determination of the Secondary Structure of Proteins

Vladimír Kopecký

2001

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Vibrational Circular Dichroism Spectra of Proteins in the Amide III Region: Measurement and Correlation of Bandshape to Secondary Structure

T. Keiderling, Petr Pancoska

Analytical Biochemistry, 1997

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Vibrational analysis of peptides, polypeptides, and proteins. XVIII. Conformational sensitivity of the ?-helix spectrum: ?I- and ?II-Poly(L-alanine)

Vaman Naik

Biopolymers, 1984

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Vibrational circular dichroism in amino acids and peptides. 7. Amide stretching vibrations in polypeptides

Laurence Nafie

Biopolymers, 1982

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UV Resonance Raman-Selective Amide Vibrational Enhancement: Quantitative Methodology for Determining Protein Secondary Structure †

Zhenhuan Chi

Biochemistry, 1998

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Structure Analysis of Unfolded Peptides I: Vibrational Circular Dichroism Spectroscopy

Jonathan Soffer

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UVRR spectroscopy of the peptide bond. 1. Amide S, a nonhelical structure marker, is a C.alpha.H bending mode

Trace Jordan

Journal of the American Chemical Society, 1991

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Orientation Determination of Protein Helical Secondary Structures Using Linear and Nonlinear Vibrational Spectroscopy

Khoi Nguyen

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Different degrees of disorder in long disordered peptides can be discriminated by vibrational spectroscopy

Reinhard Schweitzer-Stenner

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UV Resonance Raman-Selective Amide Vibrational Enhancement: Quantitative Methodology for Determining Protein Secondary Structure, Biochemistry 37

Zhenhuan Chi

1998

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Peptide conformational heterogeneity revealed from nonlinear vibrational spectroscopy and molecular-dynamics simulations

Yuguang Mu

2002

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Vibrational spectroscopy as a tool for probing protein function

Friedrich Siebert

Current Opinion in Chemical Biology, 2000

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Theoretical Study of Vibrational Properties of Peptides: Force Fields in Comparison and Ab Initio Investigation

Nicole Luchetti

Condensed Matter, 2022

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Fourier transform vibrational circular dichroism as a decisive tool for conformational studies of peptides containing tyrosyl residues

Rina Dukor, Yitzhak Tor, Laurence Nafie

Biopolymers, 2003

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Vibrational analysis of peptides, polypeptides, and proteins. VI. Assignment of β‐turn modes in insulin and other proteins

Jagdeesh Bandekar

Biopolymers, 1980

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Vibrational analysis of crystalline tri-L-alanine This paper is number 41 in a series on vibrational analysis of peptides, polypeptides, and proteins, of which Ref. 15 is …

Jagdeesh Bandekar

1991

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Empirical Amide I Vibrational Frequency Map: Application to 2D-IR Line Shapes for Isotope-Edited Membrane Peptide Bundles

Prabuddha Mukherjee

Journal of Physical Chemistry B, 2008

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Analysis of Vibrational Circular Dichroism Spectra of Peptides: A Generalized Coupled Oscillator Approach of a Small Peptide Model Using VCDtools

Wybren Buma

Journal of Physical Chemistry B, 2020

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Vibrational spectroscopic characteristics of secondary structure polypeptides in liquid water: Constrained MD simulation studies

Seungsoo Hahn

Biopolymers, 2006

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Conformational analysis of tetrapeptides by exploiting the excitonic coupling between amide I modes

Reinhard Schweitzer-Stenner

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Vibrational analysis of peptides, polypeptides, and proteins. XXI. ?-Calcium-poly(L-glutamate

Pradeep Sengupta

Biopolymers, 1984

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The vibrational spectrum of the hydrated alanine-leucine peptide in the amide region from IR experiments and first principles calculations

Petra Imhof, Irtaza Hassan

Chemical Physics Letters, 2018

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Amide modes and protein conformation.

Jagdeesh Bandekar

Biochimica et biophysica acta, 1992

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Vibrational and electronic couplings in ultraviolet resonance Raman spectra of cyclic peptides

Thomas Spiro

Biophysical Chemistry, 2003

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Vibrational circular-dichroism spectroscopy of homologous cyclic peptides designed to fold into β helices of opposite chirality

Rina Dukor

Biointerphases, 2011

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Determining In Situ Protein Conformation and Orientation from the Amide-I Sum-Frequency Generation Spectrum: Theory and Experiment

Steven Roeters

The Journal of Physical Chemistry A, 2013

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Structure analysis of proteins, peptides and metal complexes by vibrational circular dichroism

Andreja Jakas

ARKIVOC: archive for organic chemistry

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Nonadiabatic vibrational dynamics and spectroscopy of peptides: A quantum-classical description

Phuong Hoa Nguyen

Chemical Physics, 2008

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Computational Study of Helical and Helix-Hinge-Helix Conformations of an Anti-Microbial Peptide in Solution by Molecular Dynamics and Vibrational Analysis

Lenore M Martin

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Solvent and conformation dependence of amide I vibrations in peptides and proteins containing proline

santanu roy

The Journal of Chemical Physics, 2011

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