Peptides: A package for data mining of antimicrobial peptides (original) (raw)

A review on antimicrobial peptides databases and the computational tools

Shahin Ramazi

Database, 2022

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Analysis and prediction of antibacterial peptides

Gajendra P S Raghava

BMC bioinformatics, 2007

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Systematic analysis of global features and model building for recognition of antimicrobial peptides

Amarda Shehu

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Dbaasp : Database of Antimicrobial Activity and Structure of Peptides

Marie-paule Lefranc

FEMS Microbiology Letters, 2014

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CAMP: a useful resource for research on antimicrobial peptides

R. Barai

Nucleic Acids Research, 2010

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A large-scale structural classification of antimicrobial peptides

Jim Lai

BioMed research international, 2015

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Predicting antimicrobial peptides from eukaryotic genomes: In silico strategies to develop antibiotics

José Leite, anamelia bocca, Osmar Nascimento Silva

Peptides, 2012

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Dbaasp: Database of Antimicrobial Activity and Structure of Peptides

Giorgi Gogoladze

Fems Microbiology Letters, 2014

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Antimicrobial Peptides: An Update on Classifications and Databases

Phillip Bergen

International Journal of Molecular Sciences

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A Cumulative Strategy to Predict and Characterize Antimicrobial Peptides (AMPs) from Protein Database

Venkatesh Kumaresan, Jesu Arockiaraj

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Distinct profiling of antimicrobial peptide families

Azza Khamis

Bioinformatics, 2014

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DAMPD: a manually curated antimicrobial peptide database

Ashley Pretorius

Nucleic Acids Research, 2011

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DAMP: manually curated antimicrobial peptide database

Ashley Pretorius

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Elucidating the mechanism of action of antimicrobial peptides by means of computational approaches

MIGUEL CATALINA

2017

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Connecting Peptide Physicochemical and Antimicrobial Properties by a Rational Prediction Model

David Andreu

PLoS ONE, 2011

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Optimization of Antibacterial Peptides by Genetic Algorithms and Cheminformatics

Warren Cheung

Chemical Biology & Drug Design, 2011

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Identification of novel antibacterial peptides by chemoinformatics and machine learning

Christopher Fjell

Journal of medicinal chemistry, 2009

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AntiBP2: improved version of antibacterial peptide prediction

nitish mishra

BMC bioinformatics, 2010

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Prediction of Antimicrobial Activity of Synthetic Peptides by a Decision Tree Model

Pedro Ferrer Perez

Applied and Environmental Microbiology, 2013

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Antimicrobial potency of cationic antimicrobial peptides can be predicted from their amino acid composition: Application to the detection of "cryptic" antimicrobial peptides

Lorenzo Durante

Journal of theoretical biology, 2017

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Computational antimicrobial peptide design and evaluation against multidrug-resistant clinical isolates of bacteria

Deepesh Nagarajan

Journal of Biological Chemistry

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IAMPE: NMR-Assisted Computational Prediction of Antimicrobial Peptides

Shohreh Ariaeenejad

Journal of Chemical Information and Modeling, 2020

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Characterization and Identification of Natural Antimicrobial Peptides on Different Organisms

Jorng-tzong Horng

International Journal of Molecular Sciences, 2020

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Knowledge-based computational methods for identifying or designing novel, non-homologous antimicrobial peptides

Alessandro Tossi

European Biophysics Journal, 2011

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Emerging Computational Approaches for Antimicrobial Peptide Discovery

Marta Teijeira

Antibiotics, 2022

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Proteomic Screening for Prediction and Design of Antimicrobial Peptides with AmpGram

Przemysław Gagat

International Journal of Molecular Sciences

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DBAASP v3: database of antimicrobial/cytotoxic activity and structure of peptides as a resource for development of new therapeutics

Andrei Gabrielian

Nucleic Acids Research

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Structural, functional and evolutionary studies of antimicrobial peptides

Pasupuleti Mukesh

2009

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Developing anti-microbial peptide database version 1 to provide comprehensive and exhaustive resource of manually curated AMPs

DEBARUP SEN

Scientific Reports

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ChemInform Abstract: Computational Design of Highly Selective Antimicrobial Peptides

Nikolinka Antcheva, Alessandro Tossi

ChemInform, 2010

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An automatic representation of peptides for effective antimicrobial activity classification

Gabriel Del Rio

Computational and Structural Biotechnology Journal, 2020

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