From The Cover: Real-time characterization of intermediates in the pathway to open complex formation by Escherichia coli RNA polymerase at the T7A1 promoter
Hermann Heumann
Proceedings of the National Academy of Sciences, 2005
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Real-time characterization of intermediates in the pathway to open complex formation by Escherichia coil RNA polymerase at the T7AI promoter
bianca sclavi
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Real-time footprinting of DNA in the first kinetically significant intermediate in open complex formation by Escherichia coli RNA polymerase
Craig Bingman
Proceedings of the National Academy of Sciences, 2007
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Structure of open promoter complexes with Escherichia coli RNA polymerase as revealed by the DNase I footprinting technique: compilation analysis
O. Ozoline
Nucleic Acids Research, 1995
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Spectroscopic Determination of Open Complex Formation at Promoters for Escherichia coli RNA Polymerase †
Pieter Dehaseth
Biochemistry, 1997
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DNA functional groups required for formation of open complexes between Escherichia coli RNA polymerase and the λ P(R) promoter. Identification via base analog substitutions
Pieter Dehaseth
Journal of Biological Chemistry
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Functional Architecture of T7 RNA Polymerase Transcription Complexes
Dhananjaya Nayak
Journal of Molecular Biology, 2007
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Structural Organization of Bacterial RNA Polymerase Holoenzyme and the RNA Polymerase-Promoter Open Complex
Richard Ebright
Cell, 2002
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Fluorescence-Detected Conformational Changes in Duplex DNA in Open Complex Formation by Escherichia coli RNA Polymerase: Upstream Wrapping and Downstream Bending Precede Clamp Opening and Insertion of the Downstream Duplex
Munish Chhabra
Biochemistry, 2020
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Fluorescence-Detected Conformational Changes in Duplex DNA in Open Complex Formation by E. coli RNA Polymerase: Upstream Wrapping and Downstream Bending Precede Clamp Opening and Insertion of the Downstream Duplex
Munish Chhabra
2020
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Organization of Open Complexes at Escherichia coli Promoters. LOCATION OF PROMOTER DNA SITES CLOSE TO REGION 2.5 OF THE sigma 70 SUBUNIT OF RNA POLYMERASE
Stephen Minchin
Journal of Biological Chemistry, 1999
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Wrapping of DNA around the E.coli RNA polymerase open promoter complex
Martin Guthold
The EMBO Journal, 1999
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Mode of DNA-protein interaction between the C-terminal domain of Escherichia coli RNA polymerase alpha subunit and T7D promoter UP element
O. Ozoline
Nucleic Acids Research, 2001
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Topography of intermediates in transcription initiation of E.coli
Hermann Heumann
The EMBO journal, 1990
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Initiation Complexes of Escherichia coli RNA Polymerase and T7 DNA
David McConnell
European Journal of Biochemistry, 1973
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Conformational changes of E. coli RNA polymerase during transcription initiation
Ranjan Sen
Biophysical Chemistry, 1996
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An activity map of the Escherichia coli RNA polymerase bridge helix
Robert Weinzierl
Journal of Biological …, 2011
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Conformational Changes of Escherichia coli σ54-RNA-Polymerase upon Closed–Promoter Complex Formation
Marin Van Heel
Journal of Molecular Biology, 2005
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Visualization of intermediary transcription states in the complex between Escherichia coli DNA-dependent RNA polymerases and a promoter-carrying DNA fragment using the gel retardation method
Hermann Heumann
European Journal of Biochemistry, 1986
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DNA melting by RNA polymerase at the T7A1 promoter precedes the rate-limiting step at 37 C and results in the accumulation of an off-pathway intermediate
Hermann Heumann
Nucleic Acids Research, 2009
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Single DNA Molecule Analysis of Transcription Complexes
Martin Guthold
Methods in Enzymology, 2003
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Base Flipping in Open Complex Formation at Bacterial Promoters
Pieter Dehaseth
Biomolecules, 2015
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Structural Organization of the RNA Polymerase-Promoter Open Complex
Vladimir Mekler
Cell, 2000
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Complete Structural Model of Escherichia coli RNA Polymerase from a Hybrid Approach
Kelly-Anne Twist
PLoS Biology, 2010
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Alteration of the −35 and −10 sequences and deletion the upstream sequence of the −35 region of the promoter A1 of the phage T7 in dsDNA confirm the contribution of non-specific interactions with E. coli RNA polymerase to the transcription initiation process
Katarzyna Turecka
Frontiers in Molecular Biosciences, 2024
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The Escherichia coli RNA Polymerasemiddle dotAnti-sigma 70 AsiA Complex Utilizes alpha -Carboxyl-terminal Domain Upstream Promoter Contacts to Transcribe from a -10/-35 Promoter
Annie Kolb
Journal of Biological Chemistry, 2001
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Release of the .sigma. subunit from Escherichia coli RNA polymerase transcription complexes is dependent on the promoter sequence
Thomas Stackhouse
Biochemistry, 1989
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Evidence for a Tyrosine–Adenine Stacking Interaction and for a Short-lived Open Intermediate Subsequent to Initial Binding of Escherichia coli RNA Polymerase to Promoter DNA
Pieter Dehaseth
Journal of Molecular Biology, 2009
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FRET Characterization of DNA Wrapping in Closed and Open Escherichia coli RNA Polymerase - λPR Promoter Complexes
Munish Chhabra
Biochemistry, 2016
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Structure of the Escherichia coli RNA polymerase α subunit C-terminal domain
Jens Birktoft
Acta Crystallographica Section D Biological Crystallography, 2010
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Transcriptional activation via DNA-looping: visualization of intermediates in the activation pathway of E. coli RNA polymerase·σ54 holoenzyme by scanning force microscopy
Martin Guthold
Journal of Molecular Biology, 1997
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Transcriptional Activation via DNA-looping: Visualization of Intermediates in the Activation Pathway of E. coli RNA Polymerases s s54 Holoenzyme by Scanning Force Microscopy
Martin Guthold
J Mol Biol, 1997
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Indirect read-out of the promoter DNA by RNA polymerase in the closed complex
Neeladri Roy, I. Bera
Nucleic Acids Research, 2013
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Twisted or Shifted? Fluorescence Measurements of Late Intermediates in Transcription Initiation by T7 RNA Polymerase
karsten theis
Biochemistry, 2007
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Topological and Conformational Analysis of the Initiation and Elongation Complex of T7 RNA Polymerase Suggests a New Twist
karsten theis
Biochemistry, 2004
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