A three-dimensional model of a group II intron RNA and its interaction with the intron-encoded reverse transcriptase (original) (raw)

New loop-loop tertiary interactions in self-splicing introns of subgroup IC and ID: a complete 3D model of the ribozyme

Eric Westhof

Chem Biol, 1996

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Structure of a group II intron in complex with its reverse transcriptase

Rajendra Agrawal

Nature Structural & Molecular Biology, 2016

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Transitions Between the Steps of Forward and Reverse Splicing of Group IIC introns

Claire Smathers

RNA, 2020

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The ribozyme core of group II introns: a structure in want of partners

Eric Westhof

Trends in Biochemical Sciences, 2009

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The group II intron ribonucleoprotein precursor is a large, loosely packed structure

Joachim Frank

Nucleic Acids Research, 2010

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Site-specific reverse splicing of a HEG-containing group I intron in ribosomal RNA

Asa Birgisdottir

Nucleic Acids Research, 2005

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New loop-loop tertiary interactions in self-splicing introns of subgroup IC and ID: a complete 3D model of the Tetrahymena thermophila ribozyme

Eric Westhof

Chemistry & Biology, 1996

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A three-dimensional perspective on exon binding by a group II self-splicing intron

Mario Dalla Costa

The EMBO Journal, 2000

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A Reverse Transcriptase/Maturase Promotes Splicing by Binding at Its Own Coding Segment in a Group II Intron RNA

Joseph Sanfilippo

Molecular Cell, 1999

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Contribution of base-pairing interactions between group II intron fragments during trans-splicing in vivo

Cecilia Quiroga

RNA, 2011

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Hydrolytic cleavage by a group I intron ribozyme is dependent on RNA structures not important for splicing

Asa Birgisdottir

European Journal of Biochemistry, 2004

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Activating the branch-forming splicing pathway by reengineering the ribozyme component of a natural group II intron

MARIA CELIA BEZERRA COSTA

RNA (New York, N.Y.), 2016

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Crystal structure of a eukaryotic group II intron lariat

Aaron Robart

2014

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The mechanism of splicing as told by group II introns: Ancestors of the spliceosome

Claire Smathers

Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, 2019

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Structural basis for the second step of group II intron splicing

Aaron Robart

Nature Communications

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Bacterial group II introns: not just splicing

Nicolás Toro

FEMS microbiology …, 2007

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A Conjugation-Based System for Genetic Analysis of Group II Intron Splicing in Lactococcus lactis

Jin Zhuo

Journal of Bacteriology, 2004

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Now on display: a gallery of group II intron structures at different stages of catalysis

Srinivas Somarowthu

Mobile DNA, 2013

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Group II intron splicing factors derived by diversification of an ancient RNA-binding domain

Gerard Ostheimer, R. Williams-Carrier

2003

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Group II intron–ribosome association protects intron RNA from degradation

Lydia Contreras

RNA, 2013

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Activation of the catalytic core of a group I intron by a remote 3' splice junction

E. Westhof

Genes & Development, 1992

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In vitro characterization of the splicing efficiency and fidelity of the RmInt1 group II intron as a means of controlling the dispersion of its host mobile element

Nicolás Toro

RNA, 2014

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Correlation between the secondary structure of pre-mRNA introns and the efficiency of splicing in Saccharomyces cerevisiae

Holger Hoos, Alan Mackworth

BMC Genomics, 2008

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Computational prediction of efficient splice sites for trans-splicing ribozymes

D. Meluzzi, Gaurav Arya

RNA, 2012

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Toward predicting self-splicing and protein-facilitated splicing of group I introns

E. Westhof

2008

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Mechanistic Investigations of a Ribozyme Derived from the Tetrahymena Group I Intron: Insights into Catalysis and the Second Step of Self-Splicing †

Rui Mei

Biochemistry, 1996

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Visualization of a group II intron in the 23S rRNA of a stable ribosome

Ingrid Hahn

Proceedings of the National Academy of Sciences, 2006

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Group II Introns: Structure and Catalytic Versatility of Large Natural Ribozymes

Karola Lehmann

Critical Reviews in Biochemistry and Molecular Biology, 2003

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The Right Angle (RA) Motif: A Prevalent Ribosomal RNA Structural Pattern Found in Group I Introns

Luc Jaeger

Journal of Molecular Biology, 2012

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Structural Basis for Recognition of the Intron Branch Site RNA by Splicing Factor 1

Angela Krämer

Science, 2001

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SHAPE Analysis of Long-Range Interactions Reveals Extensive and Thermodynamically Preferred Misfolding in a Fragile Group I Intron RNA†

Caia Duncan

Biochemistry, 2008

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A Synthetic Model for Triple-Helical Domains in Self-Splicing Group I Introns Studied by Ultraviolet and Circular Dichroism Spectroscopy †

Munna Sarkar

Biochemistry, 1996

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