Bridging physiological and evolutionary time‐scales in a gene regulatory network (original) (raw)

A Genomic Regulatory Network for Development

Andrew Ransick, Maria Schilstra, Paola Oliveri, Chiou-hwa Yuh

Science, 2002

View PDFchevron_right

Modeling and Simulation of Gene Regulatory Network: A Comprehensive Survey

Surama Biswas

International Journal of Scientific and Engineering Research, 2013

View PDFchevron_right

Genetic regulation networks: circuits, regulons and attractors

Jacques Demongeot

Comptes Rendus Biologies, 2003

View PDFchevron_right

The NetBuilder' project: development of a tool for constructing, simulating, evolving, and analysing complex regulatory networks

Chrystopher L Nehaniv, K. Wegner, Maria Schilstra

BMC Systems Biology, 2007

View PDFchevron_right

Combinatorial Limits of Transcription Factors and Gene Regulatory Networks in Development and Evolution

Eric Werner

View PDFchevron_right

What Transcription Factors Can't Do: On the Combinatorial Limits of Gene Regulatory Networks

Eric Werner

View PDFchevron_right

Dissecting Genetic Networks Underlying Complex Phenotypes: The Theoretical Framework

Zhikang Li

PLoS ONE, 2011

View PDFchevron_right

Topology of Transcriptional Regulatory Networks: Testing and Improving

Gertien Smits

PLoS ONE, 2012

View PDFchevron_right

Functional models for large-scale gene regulation networks: realism and fiction

Daniel Remondini

Molecular BioSystems, 2009

View PDFchevron_right

Structurally robust biological networks

Franco Blanchini

2011

View PDFchevron_right

Editorial to the Special Issue on Computational Systems Biology

M. Ogorzalek

Proceedings of the IEEE, 2008

View PDFchevron_right

Genomic pathways database and biological data management

Z. Ozsoyoglu

Animal Genetics, 2006

View PDFchevron_right

Modeling adaptive biological systems

Alan Perelson

Biosystems, 1989

View PDFchevron_right

Network analyses in systems biology: new strategies for dealing with biological complexity

Nicholaos Jones

Synthese, 2017

View PDFchevron_right

Cellular Regulatory Network Modeling Applied to Breast Cancer

Alessandra Jordano Conforte

Networks in Systems Biology, 2020

View PDFchevron_right

Genome-scale modeling and human disease: an overview

Matthew Oberhardt

Frontiers in physiology, 2014

View PDFchevron_right

Modelling the regulation of gene expression in genetic regulatory networks

Maria Schilstra

2002

View PDFchevron_right

Modeling of Gene Regulatory Network Dynamics Using Threshold Logic

Sarma Vrudhula

Annals of the New York Academy of Sciences, 2009

View PDFchevron_right

Robustness portraits of diverse biological networks conserved despite order-of-magnitude parameter uncertainty

Anthony Soltis

Bioinformatics, 2011

View PDFchevron_right

How haematopoiesis research became a fertile ground for regulatory network biology as pioneered by Eric Davidson

Ellen Rothenberg

Current Opinion in Hematology, 2020

View PDFchevron_right

Systems biology: a way to make complex problems more understandable

B. Zhivotovsky

Cell Death and Disease, 2014

View PDFchevron_right

A Brief History of Systems Biology

A. Trewavas

The Plant Cell, 2006

View PDFchevron_right

Modeling Regulatory Networks with Weight Matrices

Gary Stormo

Biocomputing '99, 1998

View PDFchevron_right

Robustness in biological regulatory networks IV: Application to genetic networks controlling the cell cycle

Jacques Demongeot

Comptes Rendus Mathematique, 2012

View PDFchevron_right

Biased eukaryotic gene regulation rules suggest genome behaviour is near edge of chaos

B. Sawhill

Santa Fe Institute, Working Paper

View PDFchevron_right