Searching for IRES (original) (raw)
IRESPred: Web Server for Prediction of Cellular and Viral Internal Ribosome Entry Site (IRES)
Jayanta Pal
Scientific Reports, 2016
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Toward a structural understanding of IRES RNA function
J. Kieft
Current Opinion in Structural Biology, 2009
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RNA–protein interaction methods to study viral IRES elements
Gloria Lozano
Methods, 2015
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Viral IRES RNA structures and ribosome interactions
J. Kieft
Trends in Biochemical Sciences, 2008
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Viral IRES Prediction System - a Web Server for Prediction of the IRES Secondary Structure In Silico
Chung-Yung Chen
PLoS ONE, 2013
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Using RNA inverse folding to identify IRES-like structural subdomains
P. Clote
RNA Biology, 2013
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RNA-mediated translation regulation in viral genomes: computational advances in the recognition of sequences and structures
Manju Bansal
Briefings in Bioinformatics, 2019
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New insights into internal ribosome entry site elements relevant for viral gene expression
paula Serrano
Journal of General Virology, 2008
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tRNA–mRNA mimicry drives translation initiation from a viral IRES
J. Kieft
Nature Structural & Molecular Biology, 2008
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Advances in RNA Structure Prediction from Sequence: New Tools for Generating Hypotheses about Viral RNA Structure-Function Relationships
Ernest Gould
Journal of Virology, 2009
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RNA-Binding Proteins as Regulators of Internal Initiation of Viral mRNA Translation
Marcelo López-Lastra
Viruses, 2022
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Deconstructing internal ribosome entry site elements: an update of structural motifs and functional divergences
Gloria Lozano
Open Biology
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A search for structurally similar cellular internal ribosome entry sites
Stephen Baird
Nucleic Acids Research, 2007
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The 3′-Terminal Hexamer Sequence of Classical swine fever virus RNA Plays a Role in Negatively Regulating the IRES-Mediated Translation
Mengyu Chan
PLoS ONE, 2012
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An Internal Ribosome Entry Segment Promotes Translation of the Simian Immunodeficiency Virus Genomic RNA
Marcelo López-Lastra
Journal of Biological Chemistry, 2000
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A Regression-Based Analysis of Ribosome-Profiling Data Reveals a Conserved Complexity to Mammalian Translation
Marko Jovanovic
Molecular Cell, 2015
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Unmasking the information encoded as structural motifs of viral RNA genomes: a potential antiviral target
Alfredo Berzal-herranz
Reviews in Medical Virology, 2013
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Insights into the Biology of IRES Elements through Riboproteomic Approaches
Maria Touri
Journal of Biomedicine and Biotechnology, 2010
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Mechanisms of Internal Ribosome Entry in Translation Initiation
J. Kieft
Cold Spring Harbor Symposia on Quantitative Biology, 2001
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Requirement of rRNA Methylation for 80S Ribosome Assembly on a Cohort of Cellular Internal Ribosome Entry Sites
Elena Bevilacqua, B. Mazumder
Molecular and Cellular Biology, 2011
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Dynamics of IRES-mediated translation
Alex Johnson
Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2017
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Rescue of internal initiation of translation by RNA complementation provides evidence for a distribution of functions between individual IRES domains
paula Serrano
Virology, 2009
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A dynamic RNA loop in an IRES affects multiple steps of elongation factor-mediated translation initiation
J. Kieft
eLife, 2015
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Structural Basis for Ribosome Recruitment and Manipulation by a Viral IRES RNA
J. Kieft
Science, 2006
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The influence of downstream protein-coding sequence on internal ribosome entry on hepatitis C virus and other flavivirus RNAs
J. Kieft
RNA, 2001
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Efficient translation initiation directed by the 900-nucleotide-long and GC-rich 5 ' untranslated region of the human retrotransposon LINE-1 mRNA is strictly cap dependent rather than internal ribosome entry site mediated
Ivan Shatsky, Sergey Dmitriev
Molecular and Cellular Biology, 2007
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A Cross-Kingdom Internal Ribosome Entry Site Reveals a Simplified Mode of Internal Ribosome Entry
Ilya Terenin
Molecular and Cellular Biology, 2005
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Translation initiation of viral mRNAs
Fernando Valiente-Echeverría
Reviews in medical …, 2010
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Initiation of translation in bacteria by a structured eukaryotic IRES RNA
J. Kieft
Nature, 2015
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RNA structure: new messages in translation, replication and disease. Workshop on the role of RNA structures in the translation of viral and cellular RNAs
Lisa Roberts
EMBO reports, 2009
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HIV-2 genomic RNA contains a novel type of IRES located downstream of its initiation codon
Cécile H HERBRETEAU-DELALE
Nature Structural & Molecular Biology, 2005
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The structures of nonprotein-coding RNAs that drive internal ribosome entry site function
J. Kieft
Wiley Interdisciplinary Reviews: RNA, 2012
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Crystal structures of complexes containing domains from two viral internal ribosome entry site (IRES) RNAs bound to the 70S ribosome
J. Kieft
Proceedings of the National Academy of Sciences of the United States of America, 2011
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Stupina et al RNA 2008.pdf
Jonathan Dinman
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Viral Internal Ribosome Entry Site Structures Segregate into Two Distinct Morphologies
David J Rowlands
Journal of Virology, 2003
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