Crossing the phase boundary to study protein dynamics and function: combination of amide hydrogen exchange in solution and ion fragmentation in the gas phase (original) (raw)

Analyzing Protein Dynamics Using Hydrogen Exchange Mass Spectrometry

Matthias P Mayer

Journal of Visualized Experiments, 2013

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Rapid analysis of protein structure and dynamics by hydrogen/deuterium exchange mass spectrometry

David Stranz

Journal of biomolecular techniques : JBT, 2003

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Analysis of subsecond protein dynamics by amide hydrogen exchange and mass spectrometry using a quenched-flow setup

Fernanda Rodriguez

Protein Science, 2005

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Collisional Activation by MALDI Tandem Time-of-flight Mass Spectrometry Induces Intramolecular Migration of Amide Hydrogens in Protonated Peptides

Henrik Gårdsvoll, M. Ploug

Molecular & Cellular Proteomics, 2005

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Mapping protein energy landscapes with amide hydrogen exchange and mass spectrometry: I. A generalized model for a two-state protein and comparison with experiment

Igor Kaltashov, Stephen Eyles

Protein Science, 2005

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Mapping Protein–Ligand Interactions with Proteolytic Fragmentation, Hydrogen/Deuterium Exchange-Mass Spectrometry

Jeffrey Hudgens

Methods in Enzymology, 2015

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Development of Software for the In-Depth Analysis of Protein Dynamics as Determined by MALDI Mass Spectrometry-Based Hydrogen/Deuterium Exchange

Honoo Satake

Mass Spectrometry, 2019

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Hydrogen deuterium exchange: methods to probe protein dynamics at single residue resolution

Michele Stofella

2020

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Dynamic Protein Complexes: Insights from Mass Spectrometry

Harold Hernandez

Journal of Biological Chemistry, 2001

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Mapping Protein Conformational Landscapes under Strongly Native Conditions with Hydrogen Exchange Mass Spectrometry

Sheila Jaswal

The Journal of Physical Chemistry B, 2015

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Many Overlapping Peptides for Protein Hydrogen Exchange Experiments by the Fragment Separation-Mass Spectrometry Method

Leland Mayne

Journal of The American Society for Mass Spectrometry, 2011

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Automated extraction of backbone deuteration levels from amide H/2H mass spectrometry experiments

Matthew Hotchko

Protein Science, 2006

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Restraining Expansion of the Peak Envelope in H/D Exchange-MS and Its Application in Detecting Perturbations of Protein Structure/Dynamics

David Schriemer

Analytical Chemistry, 2008

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Computational method allowing Hydrogen-Deuterium Exchange Mass Spectrometry at single amide Resolution

Chris Gessner

Scientific reports, 2017

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Hydrogen exchange monitored by MALDI-TOF mass spectrometry for rapid characterization of the stability and conformation of proteins

Josep Villanueva

FEBS Letters, 2000

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Conformer-specific characterization of nonnative protein states using hydrogen exchange and top-down mass spectrometry

Guanbo Wang

Proceedings of the National Academy of Sciences, 2013

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Factors affecting gas-phase deuterium scrambling in peptide ions and their implications for protein structure determination

Jeroen Demmers

Journal of the American Chemical Society, 2002

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Protein Structural Analysis via Mass Spectrometry-Based Proteomics

Antonio Artigues

Advances in experimental medicine and biology, 2016

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Metastable ion formation and disparate charge separation in the gas-phase dissection of protein assemblies studied by orthogonal time-of-flight mass spectrometry

Elias Stokvis

2001

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Hydrogen/Deuterium Exchange Mass Spectrometry Reveals Mechanistic Details of Activation of Nucleoside Diphosphate Kinases by Oligomerization

Florian Georgescauld

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Studies of biomolecular conformations and conformational dynamics by mass spectrometry

Stephen Eyles

Mass Spectrometry Reviews, 2002

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Hydrogen Atom Scrambling in Selectively Labeled Anionic Peptides Upon Collisional Activation by MALDI Tandem Time-of-Flight Mass Spectrometry

M. Ploug

Journal of the American Society for Mass Spectrometry, 2008

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Hydrogen/Deuterium Exchange-Mass Spectrometry: A Powerful Tool for Probing Protein Structure, Dynamics and Interactions

Adriano Aguzzi

Current Medicinal Chemistry, 2007

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Protein structure change studied by hydrogen-deuterium exchange, functional labeling, and mass spectrometry

William Li

Proceedings of The National Academy of Sciences, 2003

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Direct evidence for a two-state protein unfolding transition from hydrogen-deuterium exchange, mass spectrometry, and NMR.

David Baker

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Pulsed Hydrogen/Deuterium Exchange MS/MS for Studying the Relationship between Noncovalent Protein Complexes in Solution and in the Gas Phase after Electrospray Ionization

belal hossain

Analytical Chemistry, 2006

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Expansion of time window for mass spectrometric measurement of amide hydrogen/deuterium exchange reactions

Jessica Lee

Rapid Communications in Mass Spectrometry, 2010

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Hydrogen/deuterium exchange on yeast ATPase supramolecular protein complex analyzed at high sensitivity by MALDI mass spectrometry

Michel Laguerre

Journal of the American Society for Mass Spectrometry, 2003

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Characterization of peptide folding nuclei by hydrogen/deuterium exchange-mass spectrometry

ROBIN HOOD

Protein Science, 2005

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Tandem mass spectrometry of amidated peptides

Gilles Subra

Journal of Mass Spectrometry, 2006

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Hybrid Mass Spectrometry: Towards Characterization of Protein Conformational States

Zainab Ahdash

Trends in Biochemical Sciences, 2016

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Enhanced Digestion Efficiency, Peptide Ionization Efficiency, and Sequence Resolution for Protein Hydrogen/Deuterium Exchange Monitored by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry

Mark Emmett

Analytical Chemistry, 2008

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Access of hydrogen-radicals to the peptide-backbone as a measure for estimating the flexibility of proteins using matrix-assisted laser desorption/ionization mass spectrometry

Mitsuo Takayama

International journal of molecular sciences, 2014

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Stepwise protein folding at near amino acid resolution by hydrogen exchange and mass spectrometry

Walter Englander

Proceedings of the National Academy of Sciences, 2013

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Protein Folding—How and Why: By Hydrogen Exchange, Fragment Separation, and Mass Spectrometry

Walter Englander

Annual Review of Biophysics, 2016

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