A comparison of micro-organism populations associated with Vitis vinifera cvs. Cabernet Sauvignon and Pinot Noir (original) (raw)
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Characterization of Botryosphaeriaceae Species as Causal Agents of Trunk Diseases on Grapevines
Plant Disease, 2015
Botryosphaeriaceae spp. have a cosmopolitan distribution and a wide range of plant hosts. Over the last 15 years, worldwide, 21 species of this family have been associated with grapevine trunk diseases that cause cankers and dieback on grapevines. Here, we surveyed vineyards of Vitis vinifera 'Lambrusco', 'Sangiovese', and 'Montepulciano' in three areas of the Foggia province (Cerignola, Foggia, and San Severo) in southern Italy. Wood samples from grapevines showing general decline, dieback, cankers, and wood and foliar discoloration yielded 344 fungal isolates identified as Botryosphaeriaceae spp. A phylogenetic study combining internal transcribed spacer and translation elongation factor 1-a sequences of 60 representative isolates identified nine botryosphaeriaceous species: Botryosphaeria dothidea, Diplodia corticola, D. mutila, D. seriata, Dothiorella iberica, Do. sarmentorum, Lasiodiplodia citricola, L. theobromae, and Neofusicoccum parvum. Pathogenicity tests confirmed that all nine species cause canker and dieback of grapevines. However, this is the first report of L. citricola as causal agent of wood cankers and dieback of grapevine. To date, including L. citricola, there are 25 botryosphaeriaceous species associated with V. vinifera worldwide, of which 12 have been reported for grapevines in Italy. Grapevine trunk diseases represent one of the most important problems in viticulture worldwide, because they can result in yield reductions and increased production costs. Most of these trunk diseases are caused by fungal pathogens that penetrate through pruning wounds and invade the wood. Botryosphaeriaceae spp. represent one of the main fungal pathogens that cause severe trunk diseases on grapevines (Crous et al. 2006; Pascoe 1998; Phillips 2002;Úrbez-Torres et al. 2006). Botryosphaeriaceous fungi have a cosmopolitan distribution, and they occur across a wide range of plant hosts (Liu et al. 2012). Over the last 15 years, many species of this family have been associated with grapevine trunk diseases, and they were considered as pathogenic fungi by Phillips (2002),
Several species belonging to the Botryosphaeriaceae were isolated from grapevine (Vitis vinifera) tissue other than wood during a survey of two vineyards planted to cultivars 'Chardonnay' and 'Shiraz' in the Hunter Valley, New South Wales, Australia over the 2007/08 and 2008/09 growing seasons. A total of 188 isolates corresponding to nine different species of Diplodia, Dothiorella and Neofusicoccum anamorphs were isolated from dormant buds, flowers, pea-sized berries and mature berries prior to harvest in addition to 142 isolates from the trunks of the same vines. Furthermore, the occurrence of Dothiorella viticola, Diplodia mutila and Neofusicoccum australe is reported here for the first time from grapevines in the Hunter Valley. These findings may provide important information for the management and spread of Botryosphaeriaceae in vineyards where they are considered serious wood-invading pathogens. Botryosphaeriaceae are occasionally found on bunches, however, until now they have not directly been related to bunch rots. Control strategies for trunk diseases caused by Botryosphaeriaceae are currently limited to remedial surgery and wound protection. These strategies do not consider other grapevine tissue as potential inoculum sources for infection of Botryosphaeriaceae in the vineyard.
Fungal pathogens associated with grapevine trunk diseases in young vineyards in Sicily
Phytopathologia Mediterranea, 2020
After the first report of grapevine decline caused by Botryosphaeriaceae in Sicily in 2007, epidemiological studies carried out in mature vineyards until 2011 confirmed the widespread occurrence of "Botryosphaeria dieback" and the "Esca complex" disease. Dieback symptoms were also recently observed in two young vineyards in Partanna and Castellammare del Golfo in western Sicily (Trapani province). Declining vines were inspected for grapevine trunk disease (GTD) symptoms, and were uprooted and submitted for analyses. Fungal isolates were collected and identified using culturing and molecular analyses. One isolate per identified species was inoculated to three grapevine shoots to evaluate pathogenicity and fulfil Koch's postulates. Several GTD Botryosphaeriaceae pathogens in the genera Cadophora, Ilyonectria, Neonectria, Phaeoacremonium and Phaeomoniella were isolated from the symptomatic young vines. Artificial inoculation confirmed the pathogenicity of these ...
European Journal of Plant Pathology, 2011
Several species of Botryosphaeriaceae and Phaeomoniella chlamydospora are common agents of grapevine decline worldwide. Currently, the use of culture independent PCR based techniques for detection of Botryosphaeriaceae within grapevine tissues has been limited to Botryosphaeria dothidea. In the present study, two Botryosphaeriaceae specific nested PCR assays were developed. One with a narrow target range, to detect Neofusicoccum parvum and the closely related species complex (Neofusicoccum parvum/N. ribis sensu Pavlic et al. Molecular Phylogenetics and Evolution 51:259-268, 2009) and another, with a wider range, to detect all 17 species of Botryosphaeriaceae which have been reported as potential wood pathogens of grapevine. The effectiveness of these assays was validated in vivo on naturally infected wood samples collected from standing vines and dormant grafted rooted cuttings commercialized in Italy by different nurseries in different years. All samples were also screened by means of a previously published nested PCR assay specific for Phaeomoniella chlamydospora. It was found that: 1) propagation material may play an important role as source of primary inoculum, not only of Phaeomoniella chlamydospora, as previously reported, but also for members of the Botryosphaeriaceae, among which Neofusicoccum parvum, Botryosphaeria dothidea and Diplodia seriata are the most common, and 2) multiple infections by different species belonging to Botryosphaeriaceae and/or Phaeomoniella chlamydospora occur frequently both in standing vines and propagation material. This last finding supports the hypothesis that at least some of the non-specific symptoms of grapevine decline may be due to the presence of different pathogens within host tissues.
Botryosphaeriaceae species affecting table grape vineyards in Chile and cultivar susceptibility
Ciencia e investigación agraria, 2012
A. Morales, B.A. Latorre, E. Piontelli, and X. Besoain. 2012. Botryosphaeriaceae species affecting table grape vineyards in Chile and cultivar susceptibility. Cien. Inv. Agr. 39(3): 445-458. Several Botryosphaeriaceae species have been identified as the causes of cankers and dieback of Vitis vinifera in several grape-growing regions around the world. This research was conducted to further study the species of Botryosphaeriaceae associated with table grapes in Chile, to estimate the prevalence and severity of the disease as a function of vineyard age, to study the susceptibility of table grape cultivars to infection by Botryosphaeriaceae species, and to evaluate the effect of tissue age on the infection caused by Botryosphaeriaceae species. Symptoms were characterized by the presence of the partial or total death of the grapevine cordons and distorted leaves. Brown V-shaped or U-shaped cankers and black spots were observed in cross-sections, while brown vascular streaks were observed in longitudinal sections of the cordons and trunks. Pathogenic isolates of Diplodia seriata, D. mutila and Spencermartinsia viticola were consistently obtained from wood cankers and/or vascular streaking; D. seriata was the most common (83.3%) Botryosphaeriaceae species. In 11-to 20-year-old vineyards, the disease incidence varied between 22.0 and 69.0%, and the severity varied between 6.0 and 21.3%. The table grape cultivars 'Thompson Seedless', 'Redglobe' and 'Flame Seedless' were equally susceptible to infection by D. mutila, D. seriata and S. viticola. The age of the inoculated tissue had no significant effect on the development of the vascular necrosis. This is the first report of D. mutila and S. viticola infections of grapevines in Chile.
2015
From 2002 to 2004, vines from 11 vineyards in the Hunter Valley region and from 4 vineyards in Mudgee (New South Wales, Australia) were inspected for foliar and wood symptoms of Eutypa dieback and Botryosphaeria canker. Eutypa lata was not isolated, however species of Botryosphaeria were frequently isolated from dead and declining spurs, cordons and trunks. Two species conforming to the anamorphs of Diplodia and Fusicoccum were isolated. Cultures on PDA producing a yellow pigment, and hyaline aseptate conidia (14-23.5 x 8-13 μm in size) were identified as B. lutea. Cultures with dark brown, 1-septate, ornamented conidia (15-25 x 8-14 μm in size) at maturity were identified as B. obtusa. Pathogenicity tests were conducted on detached green shoots, detached one-year-old canes and glasshouse-grown grapevines. In all situations, disease symptoms were reproduced and Koch's postulates were fulfilled. The results demonstrate the potential of B. obtusa and B. lutea as primary pathogens ...
Plants
Botryosphaeria dieback caused by several Botryosphaeriaceae species is one of the most important grapevine trunk diseases affecting vineyards worldwide. These fungi cause wedge-shaped perennial cankers and black streaking of the wood and have also been associated with intervein leaf chlorosis, dried or mummified berries, and eventually, the death of the plant. Early season symptoms may sometimes be disregarded by growers, being mistaken with symptoms from other diseases such as downy mildew or botrytis rot. Currently, few studies are available to determine what species may be causing these early season symptoms in grapevines. During the 2018 season, during the flowering period, grapevine samples showing necrosis on green shoots, dried inflorescences, and flowers, were collected in vineyards throughout the central regions of Portugal. Isolations were performed from symptomatic organs, and twenty-three isolates of Botryosphaeriaceae were selected. An analysis of the ITS and part of th...
European Journal of Plant Pathology, 2011
This study investigated the prevalence and identity of botryosphaeriaceous dieback pathogens in necrotic grapevines tissues in New Zealand vineyards, and other woody hosts growing nearby. The presumptive identities of the isolates by conidial and cultural morphology were confirmed with ITS sequence data as Neofusicoccum australe, N. luteum, N. parvum and Diplodia seriata. They were isolated predominantly from necrotic stems of grapevine and other hosts, but also from leaves, flowers and wood debris of grapevines. Inoculation with conidia and mycelium of multiple isolates of each species onto excised and attached green shoots and trunks of five grapevine varieties, Cabernet sauvignon, Chardonnay, Pinot noir, Riesling, and Sauvignon blanc, showed that all varieties became infected to a similar extent. All species except D. seriata were pathogenic, irrespective of the host source, with N. luteum being the most and D. mutila the least pathogenic (P<0.05). On trunks, N. parvum caused cankers and the other pathogenic species caused die-back when the inoculated vines became winter-dormant. Conidia were produced from green shoot lesions and die-back wood, which indicates potential inoculum sources for vineyard infection.
Prevalence and pathogenicity of fungi associated with grapevine trunk diseases in Chilean vineyards
Ciencia e investigación agraria, 2013
G. A., Díaz, J., Auger, X., Besoain, E., Bordeu, and B. A. Latorre, 2013. Prevalence and pathogenicity of fungi associated with grapevine trunk diseases in Chilean vineyards. Cien. Inv. Agr. 40(2): 327-339. Trunk diseases in grapevine (Vitis vinifera) have been identified as a major problem in the wine and table grape industries around the world, reducing the productivity, quality and longevity of vineyards. The present study examined 694 wood samples from the cordons and trunks of vines with trunk disease symptoms in 67 Chilean vineyards located between Copiapó (27°18' S) and Los Angeles (37°42' S). A total of 1,363 fungal isolates were obtained from diseased cordons and trunks with dark brown streaking, yellowish softspongy cankers and brown hard V-shaped cankers. Using molecular identification, a total of 12 fungal genera were identified in Chile at varying frequencies: Phaeomoniella chlamydospora (85%); Botryosphaeriaceae (56%) including Diplodia mutila, D. seriata, Neofusicoccum parvum and Spencermartinsia viticola; Inocutis sp. (47%); Diatrypaceae (Cryptovalsa ampelina and Eutypella leprosa) (4.8%); Seimatosporium botan (1.7%); Phomopsis viticola (0.4%); Cylindrocarpon sp. (0.4%); and Phaeoacremonium aleophilum (0.2%). All species were pathogenic, inducing dark brown streaking on various aged grapevine wood tissue. In conclusion, several fungal species are associated with grapevine trunk diseases in the Chilean vineyards being Pa. chlamydospora, D. seriata and Inocutis sp. the most frequent isolated species. These are pathogens that can be found alone or they can coexist in the same plant. This is the first report of Pho. viticola associated with trunk diseases in Chile.
Pathogenicity and epidemiology of Botryosphaeriaceae species isolated from grapevines in Australia
Australasian Plant Pathology, 2013
Botryosphaeriaceae species are among the most common fungi isolated from grapevine (Vitis vinifera) cankers in Australia. Thirty-eight isolates comprising eight Botryosphaeriaceae species isolated from grapevine cankers throughout New South Wales and South Australia were used in a pathogenicity study on mature wood of 15-year-old Chardonnay grapevines. Experiments showed that all eight species were able to infect grapevines under field conditions causing vascular discoloration and/or staining of the wood (lesions). However, differences in pathogenicity were evident among strains and species (P<0.001). Neofusicoccum parvum and Lasiodiplodia theobromae were the most pathogenic based on lesion length, followed by Neofusicoccum australe, Botryosphaeria dothidea and Diplodia mutila and thereafter by Dothiorella viticola, Dothiorella iberica and Diplodia seriata, which were the least pathogenic. Growth rates also differed significantly among species depending on temperature (P<0.001). Lasiodiplodia theobromae and B. dothidea grew optimally between 29 and 30°C, Diplodia and Neofusicoccum spp. between 25 and 27°C, and Dothiorella spp. at temperatures between 22 and 24°C. Temperature-growth relationships correlated well with previous data on the prevalence and distribution of Botryosphaeriaceae species in Australian vineyards. Due to their pathogenicity, prevalence, distribution and tolerance to a wide range of environmental conditions, the Botryosphaeriaceae pose a significant threat to the Australian wine industry.