Hardy-Weinberg Proportions Methods Manual Version 0.1. 2-(September 9, 2009) (original) (raw)

Hardy–Weinberg analysis of a large set of published association studies reveals genotyping error and a deficit of heterozygotes across multiple loci

Margit Burmeister

2008

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Statistical inference for Hardy-Weinberg proportions in the presence of missing genotype information

VICTOR MORENO

PloS one, 2013

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Hardy–Weinberg equilibrium in genetic association studies: an empirical evaluation of reporting, deviations, and power

Evangelia Ntzani

European Journal of Human Genetics, 2005

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A Consideration of the Chi-Square Test of Hardy-Weinberg Equilibrium in a Non-Multinomial Situation

Edward Rothman

Advances in Applied Probability, 1976

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Testing Heterozygote Excess and Deficiency

Michel Raymond

Genetics, 1995

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Cubic exact solutions for the estimation of pairwise haplotype frequencies: implications for linkage disequilibrium analyses and a web tool 'CubeX

Santiago Rodriguez

BMC Bioinformatics, 2007

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A Powerful Method for Including Genotype Uncertainty in Tests of Hardy-Weinberg Equilibrium

Nathan Tintle

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 2016

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Haplotype frequency estimation in patient populations: The effect of departures from Hardy-Weinberg proportions and collapsing over a locus in the HLA region

Diogo Meyer

Genetic Epidemiology, 2002

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The relevance of checking population allele frequencies and Hardy-Weinberg Equilibrium in genetic association studies: the case of SLC6A4 5-HTTLPR polymorphism in a Chinese Han Irritable Bowel Syndrome association study

Valerio Napolioni

Immunology letters, 2014

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Hardy-Weinberg testing for HLA class II (DRB1, DQA1, DQB1, AND DPB1) loci in 26 human ethnic groups

Kjersti Rønningen

Tissue Antigens, 1999

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Testing allele homogeneity: the problem of nested hypotheses

Ana Hounie

BMC Genetics, 2012

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Testing for Hardy-Weinberg Equilibrium in Samples With Related Individuals

Catherine Bourgain

Genetics, 2004

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chifish: a computer program testing for genetic heterogeneity at multiple loci using chi-square and Fisher's exact test

Nils Ryman

Molecular Ecology Notes, 2006

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Detection of genotyping errors by Hardy–Weinberg equilibrium testing

Linda McCarthy

European Journal of Human Genetics, 2004

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A Note on Exact Tests of Hardy-Weinberg Equilibrium

Janis Wigginton, David Cutler

The American Journal of Human Genetics, 2005

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Measuring departures from Hardy–Weinberg: a Markov chain Monte Carlo method for estimating the inbreeding coefficient

David Balding

Heredity, 1998

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Bayesian model selection for the study of Hardy–Weinberg proportions and homogeneity of gender allele frequencies

Josep Ginebra

Heredity

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Haplotype Estimation and Linkage Disequilibrium Methods Manual: Version 0.1. 8 (June 3, 2011)

Alex Lancaster

immport.niaid.nih.gov

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Haplotype analysis in population genetics and association studies

Mitchell Gail

Pharmacogenomics, 2003

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Theory and Practice in Quantitative Genetics

Danielle Posthuma

Twin Research, 2003

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The quantitative trait linkage disequilibrium test: a more powerful alternative to the quantitative transmission disequilibrium test for use in the absence of population stratification

Michael Mahaney

BMC Genetics, 2005

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Frequencies of the Hereditary Hemochromatosis Allele in Different Populations. Comparison of Previous Phenotypic Methods and Novel Genotypic Methods

Palle Lyngsie Pedersen

International Journal of Hematology, 2003

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Power and Sample Size Calculations for Case-Control Genetic Association Tests when Errors Are Present: Application to Single Nucleotide Polymorphisms

Stephen Finch

Human Heredity, 2002

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A Hardy-Weinberg Equilibrium Test for Analyzing Population Genetic Surveys With Complex Sample Designs

Ramal Moonesinghe

American Journal of Epidemiology, 2010

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Announcement of Population Data Allele frequencies for 70 autosomal SNP loci with U.S. Caucasian, African-American, and Hispanic samples

Fabiano Sandrini

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Determination of allele frequency in pooled DNA: comparison of three PCR-based methods

ranjit thirumaran

Biotechniques, 2005

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Comparison of prospective and retrospective methods for haplotype inference in case-control studies

Glen Satten

Genetic Epidemiology, 2004

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Increasing Power for Tests of Genetic Association in the Presence of Phenotype and/or Genotype Error by Use of Double-Sampling

Stephen Finch

Statistical Applications in Genetics and Molecular Biology, 2000

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Cautions of Using Allele-Based Tests Under Heterosis

Lifescience Global Canada

International Journal of Statistics in Medical Research, 2013

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A new statistic for the analysis of association between trait and polymorphic marker loci

smail mahdi

Mathematical Biosciences, 2000

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Estimating the Allele Frequency of Autosomal Recessive Disorders through Mutational Records and Consanguinity: The Homozygosity Index (HI)

Alessandro Gialluisi, Yair Anikster, Andre Megarbane

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Centralizing the non-central chi-square: a new method to correct for population stratification in genetic case-control association studies

Prakash Gorroochurn

Genetic Epidemiology, 2006

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A Note on Exact Conditional and Unconditional Tests for Hardy-Weinberg Equilibrium

Guogen Shan

Human Heredity, 2013

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