Sequence-specific Solution Structures of the Four Isosequential Pairs of Single-stranded DNAs and RNAs
Jyoti Chattopadhyaya
Nature Precedings, 2008
View PDFchevron_right
An Analysis of the Different Behavior of DNA and RNA through the Study of the Mutual Relationship between Stacking and Hydrogen Bonding
joan bertran
The Journal of Physical Chemistry B, 2009
View PDFchevron_right
High-resolution NMR studies of chimeric DNA-RNA-DNA duplexes, heteronomous base pairing, and continuous base stacking at junctions
Shan-ho Chou
Biochemistry, 1991
View PDFchevron_right
Backbone-base inclination as a fundamental determinant of nucleic acid self- and cross-pairing
Paolo Lubini
Nucleic Acids Research, 2007
View PDFchevron_right
Hexamer Oligonucleotide Topology and Assembly Under Solution Phase NMR and Theoretical Modeling Scrutiny
John Parkinson
2010
View PDFchevron_right
Assessment of competing 2'» 5'versus 3'» 5'stackings in solution structure of branched-RNA by 1H-& 31 P-NMR spectroscopy
Peter Agback
Tetrahedron, 1992
View PDFchevron_right
The Physical Basis of Nucleic Acid Base Stacking in Water
Hillary Michaels
Biophysical Journal, 2001
View PDFchevron_right
Gas-Phase DNA Oligonucleotide Structures. A QM/MM and Atoms in Molecules Study
James Platts
The Journal of Physical Chemistry A, 2006
View PDFchevron_right
NMR Studies of DNA Single Strands and DNA:RNA Hybrids with and without 1-Propynylation at C5 of Oligopyrimidines ‡ , #
Brent Znosko, Douglas Turner
Journal of the American Chemical Society, 2003
View PDFchevron_right
Sequence dependence of base-pair stacking in right-handed DNA in solution: proton nuclear Overhauser effect NMR measurements
Ramesh Bhatt
Proceedings of the National Academy of Sciences, 1983
View PDFchevron_right
Structural properties of DNA:RNA duplexes containing 2'-O-methyl and 2'-S-methyl substitutions: a molecular dynamics investigation
dattam venkateswarlu
Nucleic Acids Research, 1999
View PDFchevron_right
Comparison of Intrinsic Stacking Energies of Ten Unique Dinucleotide Steps in ARNA and B-DNA Duplexes. Can We Determine Correct Order of Stability by Quantum-Chemical Calculations
Daniel Svozil
Journal of Physical Chemistry B, 2010
View PDFchevron_right
An eight-stranded helical fragment in RNA crystal structure: implications for tetraplex interaction
baocheng pan
Structure (London, England : 1993), 2003
View PDFchevron_right
Conformation and interaction of short nucleic acid double-stranded helices. II. Proton magnetic resonance studies on the hydrogen-bonded NH-N protons of ribosyl ApApGpCpUpU helix
Philip Borer
Biochemistry, 1975
View PDFchevron_right
Revisiting the planarity of nucleic acid bases: Pyramidilization at glycosidic nitrogen in purine bases is modulated by orientation of glycosidic torsion
Luc Van Meervelt, Vladimír Sychrovský, Zuzana Vokácová
Nucleic Acids Research, 2009
View PDFchevron_right
DNA bending and sequence-dependent backbone conformation. NMR and computer experiments
M. Farrar
European Journal of Biochemistry, 1999
View PDFchevron_right
Sequence specific conformation of a DNA decamer containing an adenine tract studied in solution by 1H-NMR spectroscopy
Laurence Wakelin
Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression, 1990
View PDFchevron_right
An abasic site in DNA. Solution conformation determined by proton NMR and molecular mechanics calculations
Ramon Eritja, Jean Cognet
Nucleic Acids Research, 1987
View PDFchevron_right
DNA and RNA Charge Transport Effect of Sequence, Stacking, Structure and Hg Incorporation
M. Vala
Biophysical Journal, 2013
View PDFchevron_right
Helical stacking in DNA three-way junctions containing two unpaired pyrimidines: proton NMR studies
Igor Uporov
Biophysical Journal, 1995
View PDFchevron_right
Nucleic acids from self-assembly to induced-fit recognition
Eric Westhof
Current Opinion in Structural Biology, 1997
View PDFchevron_right
Duplex DNA Retains the Conformational Features of Single Strands: Perspectives from MD Simulations and Quantum Chemical Computations
Andrea Peluso
International Journal of Molecular Sciences
View PDFchevron_right
Dynamic Structures of DNA Heptamers with Different Central Trinucleotide Sequences Studied by Electrochemical and Spectral Methods
Libuse Trnkova
Electroanalysis, 2014
View PDFchevron_right
Solution Structures of DNA Duplexes Containing a DNA·RNA Hybrid Region, d(GG)r(AGAU)d(GAC)·d(GTCATCTCC) and d(GGAGA)r(UGAC)·d(GTCATCTCC) † , ‡
Chojiro Kojima
Biochemistry, 1996
View PDFchevron_right
Properties of the Nucleic-acid Bases in Free and Watson-Crick Hydrogen-bonded States: Computational Insights into the Sequence-dependent Features of Double-helical DNA
Marcia Fenley
Biophysical reviews, 2009
View PDFchevron_right
NMR structure of a parallel-stranded DNA duplex at atomic resolution
rani p
View PDFchevron_right
Properties of the nucleic-acid bases in free and Watson-Crick hydrogen-bonded states: computational insights into the sequence-dependent features of double-helical …
Andrew Colasanti
Biophysical …, 2009
View PDFchevron_right
The Role of Backbone Oxygen Atoms in the Organization of Nucleic Acid Tertiary Structure: Zippers, Networks, Clamps, and CH…O Hydrogen Bonds
Imre Berger
Chemistry-a European Journal, 1997
View PDFchevron_right
Molecular Dynamics of Double Stranded Xylo-Nucleic Acid
Arnout Ceulemans
Journal of Chemical Theory and Computation, 2017
View PDFchevron_right