Isolation and mass spectrometry of transcription factor complexes (original) (raw)

Characterization of transcription factors by mass spectrometry and the role of SELDI-MS

Cameron Forde

Mass Spectrometry Reviews, 2002

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Systematic measurement of transcription factor-DNA interactions by targeted mass spectrometry identifies candidate gene regulatory proteins

John Aitchison, Song Li

Proceedings of the National Academy of Sciences, 2013

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Affinity Purification Strategies for Proteomic Analysis of Transcription Factor Complexes

R. Giambruno, Alexey Stukalov

Journal of Proteome Research, 2013

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Mass spectrometric screening of transcriptional regulators using DNA affinity capture assay

Jae Sohng

Analytical Biochemistry, 2005

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Purification and characterization of transcription factors

Arnold Berk

Mass Spectrometry Reviews, 2013

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A Rapid Method to Capture and Screen for Transcription Factors by SELDI Mass Spectrometry

Cameron Forde

Biochemical and Biophysical Research Communications, 2002

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Protein modifications in transcription elongation

Brian D Strahl

Biochimica et biophysica acta, 2009

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Sequence-Specific Capture of Protein-DNA Complexes for Mass Spectrometric Protein Identification

Yuan Yuan

PLoS ONE, 2011

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Novel subunits of the TATA binding protein free TAFII-containing transcription complex identified by matrix-assisted laser desorption/ionization-time of flight mass spectrometry following one-dimensional gel electrophoresis

Nükhet Cavusoglu

PROTEOMICS, 2003

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Nano-electrospray tandem mass spectrometric analysis of the acetylation state of histones H3 and H4 in stationary phase in Saccharomyces cerevisiae

Hugh Patterton

BMC Biochemistry, 2011

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Multi-Protein Complexes Studied by Mass Spectrometry

Juri Rappsilber

The Scientific World JOURNAL, 2002

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High-resolution DNA-binding specificity analysis of yeast transcription factors

Federico Masi

Genome Research, 2009

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Mass spectrometry-based identification of proteins interacting with nucleic acids

Thierry Arnould

Journal of Proteomics, 2013

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Quantitative Analysis of Modified Proteins and Their Positional Isomers by Tandem Mass Spectrometry: Human Histone H4

James Pesavento

Analytical Chemistry, 2006

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Isolation and Mass Spectrometry of Specific DNA Binding Proteins

Mariana M Yaneva

Gene Mapping, Discovery, and Expression, 2005

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Global Assessment of Combinatorial Post-translational Modification of Core Histones in Yeast Using Contemporary Mass Spectrometry

Ping Ma

Journal of Biological Chemistry, 2007

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Acetylation of general transcription factors by histone acetyltransferases

Vasily Ogryzko

Current Biology, 1997

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Characterization of histones and their post-translational modifications by mass spectrometry

Benjamín García

Current Opinion in Chemical Biology, 2007

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Yeast Transcript Elongation Factor (TFIIS), Structure and Function

Xi Shan

Journal of Biological Chemistry, 1998

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A Novel Histone Acetyltransferase Is an Integral Subunit of Elongating RNA Polymerase II Holoenzyme

yang li

Molecular Cell, 1999

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Charting the Protein Complexome in Yeast by Mass Spectrometry

Anna Shevchenko

Molecular & Cellular Proteomics, 2002

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Crystal structure of the human transcription elongation factor DSIF hSpt4 subunit in complex with the hSpt5 dimerization interface

Paul Rosch

Biochemical Journal, 2010

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Unraveling Site-Specific and Combinatorial Histone Modifications Using High-Resolution Mass Spectrometry in Histone Deacetylase Mutants of Fission Yeast

Alain Verreault

Journal of Proteome Research, 2016

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Chromatin Affinity Purification and Quantitative Mass Spectrometry Defining the Interactome of Histone Modification Patterns

Alexandra Stützer

Molecular & Cellular Proteomics, 2011

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Rapid analysis of the DNA-binding specificities of transcription factors with DNA microarrays

Sonali Mukherjee

Nature Genetics, 2004

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Proteomics in chromatin biology and epigenetics: Elucidation of post-translational modifications of histone proteins by mass spectrometry

Simone Sidoli, Ole Jensen

Journal of proteomics, 2012

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Global Assessment of Combinatorial Post-translational Modification of Core Histones in Yeast Using Contemporary Mass Spectrometry: LYS4 TRIMETHYLATION CORRELATES WITH DEGREE OF ACETYLATION ON THE SAME H3 TAIL

Lihua Jiang

Journal of Biological Chemistry, 2007

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Methods review: Mass spectrometry analysis of RNAPII complexes

Amber Mosley

Methods

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ChAP-MS: a method for identification of proteins and histone posttranslational modifications at a single genomic locus

Sean Taverna

Cell reports, 2012

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Chromatin immunoprecipitation: a tool for studying histone acetylation and transcription factor binding

James R Davie

Methods, 2003

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Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

kelly am

Nature, 2002

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Proteins that bind regulatory regions identified by histone modification chromatin immunoprecipitations and mass spectrometry

Z. Ozgur, Dick Dekkers, Jeroen Demmers

Nature communications, 2015

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The small hSpt4 subunit of the human transcription elongation factor DSIF is a Zn-finger protein with α/β type topology

Paul Rosch

Biochemical and Biophysical Research Communications, 2008

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New perceptions of transcription factor properties from NMR

Stefan Bagby

Biochemistry and Cell Biology, 1998

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RNA Polymerase II Elongation Factors of Saccharomyces cerevisiae: a Targeted Proteomics Approach

Michael Kobor

Molecular and Cellular Biology, 2002

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