Mutational analysis of the nucleotide binding site of Escherichia coli dCTP deaminase (original) (raw)

Regulation of dCTP deaminase from Escherichia coli by nonallosteric dTTP binding to an inactive form of the enzyme

Eva Johansson

FEBS Journal, 2007

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Significance of the O-Helix Residues of Escherichia coli DNA Polymerase I in DNA Synthesis: Dynamics of the dNTP Binding Pocket †

Virendra Pandey

Biochemistry, 1996

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Electrostatic guidance of catalysis by a conserved glutamic acid in Escherichia coli dTMP synthase and bacteriophage T4 dCMP hydroxymethylase

Larry Hardy

Biochemistry, 1995

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Kinetic Characterization of dUTPase from Escherichia coli

Jan-Olov Kvassman

Journal of Biological Chemistry, 1996

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Tyr254 Hydroxyl Group Acts as a Two-Way Switch Mechanism in the Coupling of Heterotropic and Homotropic Effects in Escherichia coli Glucosamine-6-phosphate Deaminase †

E. Horjales

Biochemistry, 1998

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Mechanistic Studies of 1-Aminocyclopropane-1-carboxylate Deaminase: Characterization of an Unusual Pyridoxal 5′-Phosphate-Dependent Reaction

Christopher Thibodeaux

Biochemistry, 2011

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Dehydration of Ribonucleotides Catalyzed by Ribonucleotide Reductase: The Role of the Enzyme

Pedro Fernandes

Biophysical Journal, 2006

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Kinetic importance of conformations of nicotinamide adenine dinucleotide in the reactions of dehydrogenase enzymes

Rafik Karaman

Journal of the American Chemical Society, 1992

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Structural Basis for Nucleotide Binding and Reaction Catalysis in Mevalonate Diphosphate Decarboxylase

Henry Miziorko

Biochemistry, 2012

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Crystal Structures of Salmonella typhimurium Biodegradative Threonine Deaminase and Its Complex with CMP Provide Structural Insights into Ligand-induced Oligomerization and Enzyme Activation

MRN Murthy

Journal of Biological Chemistry, 2006

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Structural Basis for Recognition and Catalysis by the Bifunctional dCTP Deaminase and dUTPase from Methanococcus jannaschii

John Tainer

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Possible role of two phenylalanine residues in the active site of human cytidine deaminase

Silvia Vincenzetti

Protein Engineering, Design and Selection, 2000

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The Structure of the Cytidine Deaminase−Product Complex Provides Evidence for Efficient Proton Transfer and Ground-State Destabilization † , ‡

Charles Carter

Biochemistry, 1997

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Characterization of Mutants of βHistidine91, βAspartate213, and βAsparagine222, Possible Components of the Energy Transduction Pathway of the Proton-Translocating Pyridine Nucleotide Transhydrogenase of Escherichia coli

Philip Bragg

Archives of Biochemistry and Biophysics, 2001

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Steady-State Kinetics and Molecular Evolution of Escherichia coli MenD [(1R,6R)-2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate Synthase], an Anomalous Thiamin Diphosphate-Dependent Decarboxylase−Carboligase

Milan Bhasin

Biochemistry, 2003

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Catalytic conformation of carboxypeptidase A

Devkumar Mustafi

Journal of Molecular Biology, 1983

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Selenomethionine substitution of orotidine-5′-monophosphate decarboxylase causes a change in crystal contacts and space group

Jens-christian Poulsen

Acta Crystallographica Section D Biological Crystallography, 2001

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Use of a purified heterodimer to test negative cooperativity as the basis of substrate inactivation of Escherichia coli thymidylate synthase (Asn177→ASP)

Larry Hardy

Structure, 1994

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Structure of Escherichia coli dGTP Triphosphohydrolase: A Hexameric Enzyme With DNA Effector Molecules

Alejandro Hochkoeppler, Mark Itsko, Damian Gawel

The Journal of biological chemistry, 2015

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Crystal Structures of the Binary Ca2+ and pdTp Complexes and the Ternary Complex of the Asp21 .fwdarw. Glu Mutant of Staphylococcal Nuclease. Implications for Catalysis and Ligand Binding

Eaton Lattman

Biochemistry, 1994

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Functional Implications of Second-Shell Basic Residues for dUTPase DR2231 Enzymatic Specificity

Cristiano Mota

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Allosteric Effects of Nucleotide Cofactors on Escherichia coli Rep Helicase&DNA Binding

Timothy Lohman

Science, 1992

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Steady-State Kinetics and Molecular Evolution of Escherichia coli MenD [(1R,6R)-2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate Synthase], an Anomalous Thiamin Diphosphate-Dependent Decarboxylase−Carboligase

Milan Bhasin

Biochemistry, 2003

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Structural Determinants of Oligomerization of Δ1-Pyrroline-5-Carboxylate Dehydrogenase: Identification of a Hexamerization Hot Spot

Ranjan Singh

Journal of Molecular Biology, 2013

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Crystal structures of the binary Ca2+ and pdTp complexes and the ternary complex of the Asp21-->Glu mutant of staphylococcal nuclease. Implications for catalysis and ligand binding

Apostolos Gittis

Biochemistry

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Mutagenesis and Reversion Analysis of Residue Met-209 of the β-Subunit ofEscherichia coliATP Synthase

Janet Pagan

Archives of Biochemistry and Biophysics, 1995

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Effects of non-catalytic, distal amino acid residues on activity of E. coli DinB (DNA polymerase IV)

Mary Ondrechen

Environmental and Molecular Mutagenesis, 2012

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Reaction of 1-Amino-2-methylenecyclopropane-1-carboxylate with 1-Aminocyclopropane-1-carboxylate Deaminase: Analysis and Mechanistic Implications †

Huawei Chen

Biochemistry, 2003

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The Effect of Hinge Mutations on Effector Binding and Domain Rotation in Escherichia coli D-3-Phosphoglycerate Dehydrogenase

Sanghamitra Dey

Journal of Biological Chemistry, 2007

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The Role of Conserved Histidine Residues in the Pyridine Nucleotide Transhydrogenase of Escherichia Coli

Philip Bragg

European Journal of Biochemistry, 1996

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Molecular mimicry in deoxy-nucleotide catalysis: the structure of Escherichia coli dGTPase reveals the molecular basis of dGTP selectivity

Jinhu Song

2018

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Structural Analysis of 1-Aminocyclopropane-1-Carboxylate Deaminase: Observation of an Aminyl Intermediate and Identification of Tyr 294 as the Active-Site Nucleophile

Qin Zhou

Angewandte Chemie International Edition, 2004

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Localization of the site for the nucleotide effectors of Escherichia coli carbamoyl phosphate synthetase using site-directed mutagenesis

Vicente Fresquet

FEBS Letters, 1999

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Enhancing the catalytic repertoire of nucleic acids: a systematic study of linker length and rigidity

Jane Grasby

Nucleic Acids Research, 2001

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