GFP-mut2 Proteins in Trehalose-Water Matrixes: Spatially Heterogeneous Protein-Water-Sugar Structures (original) (raw)

2007, Biophysical Journal

We report investigations on the properties of nanoenvironments around single-GFP-mut2 proteins in trehalosewater matrixes. Single-GFPmut2 molecules embedded in thin trehalose-water films were characterized in terms of their fluorescence brightness, bleaching dynamics, excited state lifetime, and fluorescence polarization. For each property, sets of ;100-150 single molecules have been investigated as a function of trehalose content and hydration. Three distinct and interconverting families of proteins have been found which differ widely in terms of bleaching dynamics, brightness, and fluorescence polarization, whose relative populations sizably depend on sample hydration. The reported results evidence the simultaneous presence of different protein-trehalose-water nanostructures whose rigidity increases by lowering the sample hydration. Such spatial inhomogeneity is in line with the well-known heterogeneous dynamics in supercooled fluids and in nonsolid carbohydrate glasses and gives a pictorial representation of the sharp, sudden reorganization of the above structures after uptake $ release of water molecules.

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13th Conference on Methods and Applications in Fluorescence—MAF-13

Methods and Applications in Fluorescence, 2014

held in Genoa, attracting about 400 participants from 40 countries worldwide. The MAF-13 meeting gathered experts from all over the world to discuss the state of the art in all aspects of fluorescence techniques and their applications. The conference was highly multidisciplinary and brought together scientists working in areas such as biophysics, chemistry, physics, biology, pharmacology, medicine, bioengineering, nanobiotechnologies and (nano)materials. The biennal MAF conferences began in 1989 in Graz and became the reference conferences in the fluorescence field, continuously attracting new researchers at the cutting edge of chemistry, physics and biology.

Basic Principles of Fluorescence Microscopy

World Journal of Young Researchers, 2013

Fluorescence microscopy is a basic requirement in cell biology, molecular biology and biotechnology. Advancements over the years has helped scientist to trace molecules in live cells and understand the basis of cell metabolism, exchange, mutation and toxicity. In this short communication we seek to explain in simple terms the basic principles of how a fluorescence microscope works. The principles of excitation and emission focuses on the ability of fluorophores to absorb energy from photons and to emit such absorbed energy. The difference between the chemical structures of these fluorephores determines how much energy that is required to excite them and how long a fluorescence signal from a fluorophore will last. The principles of epi-illumination on the other hand describe the arrangement and function of the various components of a fluorescence microscope.

Single molecule spectroscopic characterization of GFP‐mut2 mutant for two‐photon microscopy applications

Microscopy …, 2004

The spectroscopic properties of the light-harvesting 2 complexes (LH2) from the purple bacterium Rhodopseudomonas acidophila (strain 10050) in detergent micelles and reconstituted into lipid membranes have been studied by singlemolecule spectroscopy. When LH2 complexes are solubilized from their host biological membranes by nondenaturing detergents, such as LDAO, there is a small 2-nm spectral shift of the B850 absorption band in the ensemble spectrum. This is reversed when the LH2 complexes are put back into phospholipid vesicles, i.e., into a more native-like environment. The spectroscopic properties on the single-molecule level of the detergent-solubilized LH2 complexes were compared with those reconstituted into the lipid membranes to see if their detailed spectroscopic behavior was influenced by these small changes in the position of the B850 absorption band. A detailed analysis of the low-temperature single-molecule fluorescence-excitation spectra of the LH2 complexes in these two different conditions showed no significant differences. In particular, the distribution of the spectral splitting between the circular k ¼ 61 exciton states of the B850 absorption band and the distribution of the mutual angle between the k ¼ 61 exciton states are identical in both cases. It can be concluded, therefore, that the LH2 complexes from Rps. acidophila are equally stable when solubilized in detergent micelles as they are when membrane reconstituted. Moreover, when they are solubilized in a suitable detergent and spin coated onto a surface for the single-molecule experiments they do not display any more structural disorder than when in a phospholipid membrane.

Fluorescence Emission of Disperse Red 1 in Solution at Room Temperature

The Journal of Physical Chemistry B, 2008

In this article, we report the fluorescence emission of Disperse Red 1 in solution at room temperature and pumping at 532 nm with a 25 mW diode laser. We have measured its fluorescence quantum yield in methanol, ethylene glycol, glycerol, and phenol obtaining values as high as 10 -3 in the aliphatic alcohols. The excitation spectra of Disperse Red 1 in all four solvents as well as its excitation anisotropy in glycerol are presented. Applying a Gaussian decomposition method to the absorption spectra along with the support from the excitation spectra, the positions of the different transitions in this pseudo-stilbene azobenzene dye were determined. Solvatochromic and isomerization constraint effects are discussed. Calculations using density functional theory at TD-B3LYP/6-31G*//HF/6-31G* level were performed to interpret the experimental observations.

Fluorescence correlation spectroscopy. II. An experimental realization

Biopolymers, 1974

This paper describes the first experimental application of fluorescence correlation spectroscopy, a new method for determining chemical kinetic constants and diffusion coefficients. These quantities are measured by observing the time behavior of the tiny concentration fluctuations which occur spontaneously in the reaction system even when it is in equilibrium. The equilibrium of the system is not disturbed during the experiment. The diffusion coefficients and chemical rate constants which determine the average time behavior of these spontaneous fluctuations are the same as those sought by more conventional methods including temperature-jump or other perturbation tecliniques. The experiment consists essentially in measuring the variation with time of the number of molecules of specified reactants in a defined open volume of solution. The concentration of a reactant is measured by its fluorescence; the sample volume is defined by a focused laser beam which excites the fluorescence. The fluorescent emission fluctuates in proportion with the changes in the number of fluorescent molecules as they diffuse into and out of the sample volume and as they are created or eliminated by the chemical reactions. The number of these reactant molecules must be small to permit detection of the concentration fluctuations. Hence the sample volume is small (10-8 rnl) and the concentration of the solutes is low (-10-9 M ) . We have applied this technique to the study of two prototype systems: the simple example of pure diffusion of a single fluorescent species, rhodamine 6G, and the more interesting but more challenging example of the reaction of macromolecular DNA with the drug ethidium bromide to form a fluorescent complex. The increase of the fluorescence of the ethidium bromide upon formation of the complex permits the observation of the decay of concentration fluctuations via the chemical reaction and consequently the determination of chemical rate constants.

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