An Efficient Parallel Implementation of the Hidden Markov Methods for Genomic Sequence-Search on a Massively Parallel System (original) (raw)

An Efficient Parallel Implementation of the Hidden Markov Methods for Genomic Sequence-Search on a Massively Parallel System

IEEE Transactions on Parallel and Distributed Systems, 2008

Abstract

—Bioinformatics databases used for sequence comparison and sequence alignment are growing exponentially. This has popularized programs that carry out database searches. Current implementations of sequence alignment methods based on hidden Markov models (HMM) have ...

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