A higher-level phylogenetic classification of the FungiCorresponding Editor:AFTOL Eumycota Lichens Molecular phylogenetics Mycota Nomenclature Systematics (original) (raw)

A higher-level phylogenetic classification of the Fungi

D. S. Hibbett). a v a i l a b l e a t w w w . s c i e n c e d i r e c t . c o m j o u r n a l h o m e p a g e : w w w . e l s e v i e r . c o m / l o c a t e / m y c r e s m y c o l o g i c a l r e s e a r c h 1 1 1 ( 2 0 0 7 ) 5 0 9 -5 4 7 Eumycota Lichens Molecular phylogenetics Mycota Nomenclature Systematics a b s t r a c t A comprehensive phylogenetic classification of the kingdom Fungi is proposed, with reference to recent molecular phylogenetic analyses, and with input from diverse members of the fungal taxonomic community. The classification includes 195 taxa, down to the level of order, of which 16 are described or validated here: Dikarya subkingdom nov.; Chytridiomycota, Neocallimastigomycota phyla nov.; Monoblepharidomycetes, Neocallimastigomycetes class. nov.; Eurotiomycetidae, Lecanoromycetidae, Mycocaliciomycetidae subclass. nov.; Acarosporales, Corticiales, Baeomycetales, Candelariales, Gloeophyllales, Melanosporales, Trechisporales, Umbilicariales ords. nov. The clade containing Ascomycota and Basidiomycota is classified as subkingdom Dikarya, reflecting the putative synapomorphy of dikaryotic hyphae.

Myc Res 2007 Higher-level Fungi

D. S. Hibbett). a v a i l a b l e a t w w w . s c i e n c e d i r e c t . c o m j o u r n a l h o m e p a g e : w w w . e l s e v i e r . c o m / l o c a t e / m y c r e s m y c o l o g i c a l r e s e a r c h 1 1 1 ( 2 0 0 7 ) 5 0 9 -5 4 7 Eumycota Lichens Molecular phylogenetics Mycota Nomenclature Systematics a b s t r a c t A comprehensive phylogenetic classification of the kingdom Fungi is proposed, with reference to recent molecular phylogenetic analyses, and with input from diverse members of the fungal taxonomic community. The classification includes 195 taxa, down to the level of order, of which 16 are described or validated here: Dikarya subkingdom nov.; Chytridiomycota, Neocallimastigomycota phyla nov.; Monoblepharidomycetes, Neocallimastigomycetes class. nov.; Eurotiomycetidae, Lecanoromycetidae, Mycocaliciomycetidae subclass. nov.; Acarosporales, Corticiales, Baeomycetales, Candelariales, Gloeophyllales, Melanosporales, Trechisporales, Umbilicariales ords. nov. The clade containing Ascomycota and Basidiomycota is classified as subkingdom Dikarya, reflecting the putative synapomorphy of dikaryotic hyphae.

Fungal diversity notes 111–252—taxonomic and phylogenetic contributions to fungal taxa

Fungal Diversity, 2015

Electronic supplementary material The online version of this article (Abstract This paper is a compilation of notes on 142 fungal taxa, including five new families, 20 new genera, and 100 new species, representing a wide taxonomic and geographic range. The new families, Ascocylindricaceae, Caryosporaceae and Wicklowiaceae (Ascomycota) are introduced based on their distinct lineages and unique morphology. The new Pseudoasteromassaria (Latoruaceae) and Pseudomonodictys (Macrodiplodiopsidaceae) are introduced. The newly described species of Dothideomycetes (Ascomycota) are Pseudomassariosphaeria bromicola (Amniculicolaceae), Flammeascoma lignicola (Anteagloniaceae), Ascocylindrica m a r i n a ( A s c o c y l i n d r i c a c e a e ) , L e m b o s i a x y l i a e (Asterinaceae), Diplodia crataegicola and Diplodia galiicola ( B o t r y o s p h a e r i a c e a e ) , C a r y o s p o r a a q u a t i c a (Caryosporaceae), Heracleicola premilcurensis and N e o d i d y m e l l a t h a i l a n d i c u m ( D i d y m e l l a c e a e ) , Pseudopithomyces palmicola (Didymosphaeriaceae), Floricola viticola (Floricolaceae), Brunneoclavispora bambusae, Neolophiostoma pigmentatum and Sulcosporium thailandica (Halotthiaceae), Pseudoasteromassaria fagi (Latoruaceae), Keissleriella dactylidicola (Lentitheciaceae), Lophiohelichrysum helichrysi (Lophiostomataceae), A q u a s u b m e r s a j a p o n i c a ( L o p h i o t re m a t a c e a e ) , Pseudomonodictys tectonae (Macrodiplodiopsidaceae), Microthyrium buxicola and Tumidispora shoreae (Microthyriaceae), Alloleptosphaeria clematidis, Fungal Diversity luzulae, Nodulosphaeria senecionis, Ophiosphaerella aquaticus, Populocrescentia forlicesenensis and Vagicola vagans (Phaeosphaeriaceae), Elongatopedicellata lignicola, Roussoella magnatum and Roussoella angustior (Roussoellaceae) and Shrungabeeja longiappendiculata (Tetraploasphaeriaceae). The new combinations Pseudomassariosphaeria grandispora, Austropleospora a r c h i d e n d r i , P s e u d o p i t h o m y c e s c h a r t a r u m , Pseudopithomyces maydicus, Pseudopithomyces sacchari, Vagicola vagans, Punctulariopsis cremeoalbida and Punctulariopsis efibulata Dothideomycetes. The new genera Dictyosporella (Annulatascaceae), and Tinhaudeus (Halosphaeriaceae) are introduced in Sordariomycetes ( A s c o m y c o t a ) w h i l e D i c t y o s p o re l l a a q u a t i c a ( A n n u l a t a s c a c e a e ) , C h a e t o s p h a e r i a r i v u l a r i a (Chaetosphaeriaceae), Beauveria gryllotalpidicola and Beauveria loeiensis (Cordycipitaceae), Seimatosporium sorbi and Seimatosporium pseudorosarum (Discosiaceae), Colletotrichum aciculare, Colletotrichum fusiforme and Colletotrichum hymenocallidicola (Glomerellaceae), Tinhaudeus formosanus (Halosphaeriaceae), Pestalotiopsis subshorea and Pestalotiopsis dracaenea (Pestalotiopsiceae), Phaeoacremonium tectonae (Togniniaceae), Cytospora parasitica and Cytospora tanaitica (Val saceae), Annulohypoxylon palmicola, Biscogniauxia effusae and Nemania fusoideis (Xylariaceae) are introduced as novel species to order Sordariomycetes. The newly described species of Eurotiomycetes are Mycocalicium hyaloparvicellulum (Mycocaliciaceae). Acarospora septentrionalis and Acarospora castaneocarpa (Acarosporaceae), Chapsa multicarpa and Fissurina carassensis (Graphidaceae), Sticta fuscotomentosa and Sticta subfilicinella (Lobariaceae) are newly introduced in class Lecanoromycetes. In class Pezizomycetes, Helvella pseudolacunosa and Helvella rugosa (Helvellaceae) are introduced as new species. The new families, Dendrominiaceae and Neoantrodiellaceae Fungal Diversity

Notes for genera: basal clades of Fungi (including Aphelidiomycota, Basidiobolomycota, Blastocladiomycota, Calcarisporiellomycota, Caulochytriomycota, Chytridiomycota, Entomophthoromycota, Glomeromycota, Kickxellomycota, Monoblepharomycota, Mortierellomycota, Mucoromycota, Neocallimastigomycota, ...

Fungal Diversity, 2018

Biodiversity, phylogeny and evolution of fungi

India is rich in biodiversity. One-third of fungal diversity of the globe exists in India. The early fossil record of the fungi is poor, as unlike other organisms, fungal structures do not fossilize well. Thus, theories on phylogeny of fungi are based on the morphological features of the extant fungi. From the beginning of the 20th century fungi were proposed to be monophyletic, assuming that all the fungi were derived from an algal ancestor that lost its ability to photosynthesize. This gave rise to the flagellate fungi, from which rest of the fungi evolved. The loss of flagella and the evolution of zygospore gave rise to the Zygomycotina. The uninucleate zygospores of the Edogonales gave rise to the Ascomycota. The link between them being a fungus resembling Dipodascopsis (Ascomycota). The unicellular yeasts and complex filamentous Ascomycota members having extended dikaryotic stage evolved from it, believed to be similar to modern day Taphrina. This Taphrina-like ancestor was believed to have given rise to the ancestral Basidiomycota.

Fungal evolution: diversity, taxonomy and phylogeny of the Fungi

Biological Reviews, 2019

ABSTRACTThe fungal kingdom comprises a hyperdiverse clade of heterotrophic eukaryotes characterized by the presence of a chitinous cell wall, the loss of phagotrophic capabilities and cell organizations that range from completely unicellular monopolar organisms to highly complex syncitial filaments that may form macroscopic structures. Fungi emerged as a ‘Third Kingdom’, embracing organisms that were outside the classical dichotomy of animals versus vegetals. The taxonomy of this group has a turbulent history that is only now starting to be settled with the advent of genomics and phylogenomics. We here review the current status of the phylogeny and taxonomy of fungi, providing an overview of the main defined groups. Based on current knowledge, nine phylum‐level clades can be defined: Opisthosporidia, Chytridiomycota, Neocallimastigomycota, Blastocladiomycota, Zoopagomycota, Mucoromycota, Glomeromycota, Basidiomycota and Ascomycota. For each group, we discuss their main traits and th...