New insights into the FLPergic complements of parasitic nematodes: Informing deorphanisation approaches (original) (raw)
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Trends in Parasitology, 2006
The central role of FMRFamide-like peptides (FLPs) in nematode motor and sensory capabilities makes FLP signalling an appealing target for new parasiticides. Accumulating evidence has revealed an astounding level of FLP sequence conservation and diversity in the phylum Nematoda, and preliminary work has begun to identify the nematode FLP receptor complement in Caenorhabditis elegans, with a view to investigating their
Analysis of FMRFamide-like peptide (FLP) diversity in phylum Nematoda
International Journal for Parasitology, 2005
This study reports a series of systematic BLAST searches of nematode ESTs on the Genbank database, using search strings derived from known nematode FLPs (those encoded by Caenorhabditis elegans flp genes as well as those isolated from other nematodes including Ascaris suum), as well as query sequences representative of theoretical FLPs. Over 1000 putative FLP-encoding ESTs were identified from multiple
FMRFamide-like peptides in root knot nematodes and their potential role in nematode physiology
Journal of Helminthology, 2009
FMRFamide-like peptides (FLPs) are a diverse group of neuropeptides that are expressed abundantly in nematodes. They exert potent physiological effects on locomotory, feeding and reproductive musculature and also act as neuromodulators. However, little is known about the specific expression patterns and functions of individual peptides. The current study employed rapid amplification of cDNA ends-polymerase chain reaction (RACE-PCR) to characterizeflpgenes from infective juveniles of the root knot nematodes,Meloidogyne incognitaandMeloidogyne minor. The peptides identified from these transcripts are sequelogs of FLPs from the free-living nematode,Caenorhabditis elegans; the genes have therefore been designated asMi-flp-1,Mi-flp-7,Mi-flp-12,Mm-flp-12andMi-flp-14.Mi-flp-1encodes five FLPs with the common C-terminal moiety, NFLRFamide.Mi-flp-7encodes two copies of APLDRSALVRFamide and APLDRAAMVRFamide and one copy of APFDRSSMVRFamide.Mi-flp-12andMm-flp-12encode the novel peptide KNNKFEF...
Frontiers in Endocrinology, 2021
Nematode parasites undermine human health and global food security. The frontline anthelmintic portfolio used to treat parasitic nematodes is threatened by the escalation of anthelmintic resistance, resulting in a demand for new drug targets for parasite control. Nematode neuropeptide signalling pathways represent an attractive source of novel drug targets which currently remain unexploited. The complexity of the nematode neuropeptidergic system challenges the discovery of new targets for parasite control, however recent advances in parasite ‘omics’ offers an opportunity for the in silico identification and prioritization of targets to seed anthelmintic discovery pipelines. In this study we employed Hidden Markov Model-based searches to identify ~1059 Caenorhabditis elegans neuropeptide G-protein coupled receptor (Ce-NP-GPCR) encoding gene homologs in the predicted protein datasets of 10 key parasitic nematodes that span several phylogenetic clades and lifestyles. We show that, whil...
flp-32 Ligand/Receptor Silencing Phenocopy Faster Plant Pathogenic Nematodes
PLoS Pathogens, 2013
Restrictions on nematicide usage underscore the need for novel control strategies for plant pathogenic nematodes such as Globodera pallida (potato cyst nematode) that impose a significant economic burden on plant cultivation activities. The nematode neuropeptide signalling system is an attractive resource for novel control targets as it plays a critical role in sensory and motor functions. The FMRFamide-like peptides (FLPs) form the largest and most diverse family of neuropeptides in invertebrates, and are structurally conserved across nematode species, highlighting the utility of the FLPergic system as a broad-spectrum control target. flp-32 is expressed widely across nematode species. This study investigates the role of flp-32 in G. pallida and shows that: (i) Gp-flp-32 encodes the peptide AMRNALVRFamide; (ii) Gp-flp-32 is expressed in the brain and ventral nerve cord of G. pallida; (iii) migration rate increases in Gp-flp-32-silenced worms; (iv) the ability of G. pallida to infect potato plant root systems is enhanced in Gp-flp-32-silenced worms; (v) a novel putative Gpflp-32 receptor (Gp-flp-32R) is expressed in G. pallida; and, (vi) Gp-flp-32R-silenced worms also display an increase in migration rate. This work demonstrates that Gp-flp-32 plays an intrinsic role in the modulation of locomotory behaviour in G. pallida and putatively interacts with at least one novel G-protein coupled receptor (Gp-flp-32R). This is the first functional characterisation of a parasitic nematode FLP-GPCR.
Biochemical and Biophysical Research Communications, 1997
wide range of FMRFamide-related peptides (FaRPs) To date, 9 FMRFamide-related peptides (FaRPs) have been isolated from representatives of most phyla have been identified in Caenorhabditis elegans. Eight (2). To date, FaRP-encoding genes have been isolated of these peptides are encoded on the flp-1 gene. Howfrom the molluscs, Lymnaea stagnalis (3) and Aplysia ever, AF2 (KHEYLRFamide) which was not co-encoded californica (4), the insect, Drosophila melanogaster (5, was the most abundant FaRP identified in ethanolic 6) and the free-living nematodes, Caenorhabditis elegextracts. Further radioimmunometrical screening of ans and C. vulgaris (8). The FaRP-encoding gene, acidified ethanol extracts of C. elegans has revealed flp-1 which was cloned from C. elegans was found to the presence of other novel FaRPs, which are not enencode 8 FaRPs from two, alternatively-spliced trancoded on the flp-1 gene. One of these peptides has been scripts (7). Flp-1-encoded FaRPs comprise a series of isolated by sequential rpHPLC and subjected to Ed-N-terminally extended PNFLRFamides which include man degradation analysis and gas-phase sequencing SDPNFLRFamide (PF1) and SADPNFLRFamide (PF2) and the unequivocal primary structure of the decapepas well as (K)PNFMRYamide. Subsequently, the prestide Ala-Pro-Glu-Ala-Ser-Pro-Phe-Ile-Arg-Phe-NH 2 was
VRFamide peptides in Caenorhabditis elegans and Ascaris suum : AMRNALVRFG
2016
FMRFamide-like peptide (FLP) signalling systems are core to nematode neuromuscular function. Novel drug discovery efforts associated with nematode FLP/FLP receptor biology are advanced through the accumulation of basic biological data that can reveal subtle complexities within the neuropeptidergic system. This study reports the characterisation of FMRFamide-like peptide encoding gene-11 (flp-11) and FMRFamide-like peptide encoding gene-32 (flp-32), two distinct flp genes which encode the analogous peptide, AMRN(A/S)LVRFamide, in multiple nematode species-the only known example of this phenomenon within the FLPergic system of nematodes. Using bioinformatics, in situ hybridisation, immunocytochemistry and behavioural assays we show that: (i) flp-11 and-32 are distinct flp genes expressed individually or in tandem across multiple nematode species, where they encode a highly similar peptide; (ii) flp-11 does not appear to be the most widely expressed flp in Caenorhabditis elegans; (iii) in species expressing both flp-11 and flp-32, flp-11 displays a conserved, restricted expression pattern across nematode clades and lifestyles; (iv) in species expressing both flp-11 and flp-32, flp-32 expression is more widespread and less conserved than flp-11; (v) in species expressing only flp-11, the flp-11 expression profile is more similar to the flp-32 profile observed in species expressing both; and (vi) FLP-11 peptides inhibit motor function in multiple nematode species. The biological significance and evolutionary origin of flp-11 and-32 peptide duplication remains unclear despite attempts to identify a common ancestor; this may become clearer as the availability of genomic data improves. This work provides insight into the complexity of the neuropeptidergic system in nematodes, and begins to examine how nematodes may compensate for structural neuronal simplicity. From a parasite control standpoint, this work underscores the importance of basic biological data, and has wider implications for the utility of C. elegans as a model for parasite neurobiology.
Biopolymers, 2008
Caenorhabditis elegans G-protein-coupled receptors (GPCRs; Y58G8A.4a and Y58G8A.4b) were cloned and functionally expressed in Chinese hamster ovary (CHO) cells. The Y58G8A.4a and Y58G8A.4b proteins (397 and 433 amino acid residues, respectively) differ both in amino acid sequence and length of the C-terminal tail of the receptor. A calcium mobilization assay was used as a read-out for receptor function. Both receptors were activated, with nanomolar potencies, by putative peptides encoded by the flp-18 precursor gene, leading to their designation as FLP-18R1a (Y58G8A.4a) and FLP-18R1b (Y58G8A.4b). Three Ascaris suum neuropeptides AF3, AF4, and AF20 all sharing the same FLP-18 C-terminal signature, -PGVLRF-NH 2 , were also potent agonists. In contrast to other previously reported C. elegans GPCRs expressed in mammalian cells, both FLP-18R1 variants were fully functional at 378C. However, a 37 to 288C temperature shift improved their activity, an effect that was more pronounced for FLP-18R1a. Despite differences in the C-terminus, the region implicated in distinct Gprotein recognition for many other GPCRs, the same signaling pathways were observed for both Y58G8A.4 isoforms expressed in CHO cells. Gq protein coupling seems to be the main but not the exclusive signaling pathway, because pretreatment of cells with U-73122, a phospholipase inhibitor, attenuated but did not completely abolish the Ca 2+ signal. A weak Gs-mediated receptor activation was also detected as reflected in an agonist-triggered concentration-dependent cAMP increase. The matching of the FLP-18 peptides with their receptor(s) allows for the evaluation of the pharmacology of this system in the worm in vivo. # 2007 Wiley Periodicals, Inc. Biopolymers (Pept Sci) 90: 339-348, 2008.