Mitochondrial DNA polymerase from Xenopus laevis oocytes (original) (raw)

1979, Biochemical and Biophysical Research Communications

The DNA polymerase of Xenopus laevis oocytes, with characteristics similar to those of the y polymerases of other systems, can be extracted from the mitochondrial pellet and from the mitochondria purified on a sucrose gradient. It elutes from phosphocellulose at about 0.4 M KCI and sediments faster than 4 S in high salt glycerol gradients. At low KCI concentrations it uses Poly(A) better than activated DNA as a template; the reverse is true at KCI concentrations higher than 150 mM. Various experiments are presented that indicate that it is the mitochondrial DNA pol~n~erase. In a previous report we have described the major DNA polymerase activity able to use Poly(A)-oligo(dT) as a template in Xengpus laevis oocytes (l). This enzyme has characteristics similar to those of the ~ pol3anerases of other systems, in that it efficiently uses Poly(A).oligo(dT) as a template, has a sedimentation coefficient higher than 4S and is sensitive to N'ethylmaleimide (2). The enzyme has a strict cytoplasmic location in these cells and is present in a particulate structure so that detergent is needed for its solubilization (I, 3). When detergent was omitted during the homogenization of the oocytes, virtually all the enzyme could be extracted from a 12,000 xg pellet; since mitochondria are the major component of this pellet, we decided to investigate the possibility that the enzyme is the mitochondrial DNA polymerase. In this paper we present experiments that support this hypothesis. MATERIALS AND METHODS Materials. Deoxynucleotide-5'-triphosphates were obtained from Schwartz Mann, Orangeburg, N.Y.

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Effect of activators and inhibitors on the activity of mitochondrial DNA polymerase

Folia Microbiologica, 1991

At a concentration of 0.5 to 3 mmol/L, ATP stimulates the activity of mitocbondrial DNA polymerase of Ncurospora crassa under the optimum reaction conditions; at higher concentrations, an inhibitory effect is observed. 4-Chloromercuribenzoate (1 mmol/L), a thiol inhibitor, decreases the enzyme activity twofold , while N-ethylmaleimide (2 mmol/L) has no effect. Ethidium bromide (up to 10/zmol/L) and heparin (up to 0.4/zg/mL) reduce the activity by 60 %. ddqq'P does not affect the DNA polymerase reaction. The best m vitro template is the activated calf-thymus DNA. *2nd report of the series Mitochondrial DNA polymerase from the poky mutant of Neurospora crassa; 1st report: Bio[6gia (Bratislava) 45, 601-606 (1990).

Nucleic Acids Research

Nucleic Acids Research, 2009

Rat liver chromatin contains a 3'-phosphatase/5'-OH kinase which may be involved in the repair of DNA strand breaks limited by 3'-phosphate/5'-OH ends. In order to determine whether the phosphate group can be transferred directly from the 3' to the 5' position, a polynucleotide duplex was synthesized between poly(dA) and oligo(dT) segments which had 3'-[32P]phosphate and 5'-OH ends. The oligo(dT) segments were separated by simple nicks as shown by the ability of T4 DNA ligase to seal the nick after the 3'-phosphate was removed by a phosphatase and the 5' end was phosphorylated with a kinase. The chromatin 3'phosphatase/5'-OH kinase was unable to transfer phosphate directly from the 3' to the 5' end of the oligo(dT) segments in the original duplex; ATP was needed to phosphorylate the 5'-OH end. It is concluded that the chromatin 3'-phosphatase/5'-OH kinase is unable to convert a 3'-phosphate/5'-OH nick which ...

Poly(Adenosine Diphosphate Ribose) in Physarum polycephalum

Biochemical Journal

1. The isolated nuclei of the slime mould Physarum polycephalum contain an enzyme that will incorporate [adenine-3H]NAD+ into an acid-insoluble product, which is shown to be poly(ADP-ribose). 2. This incorporation has an optimum pH of 8.2 and a temperature optimum below 10°C. 3. Optimum stimulation is given by 15mM-Mg2+. 4. 2-Mercaptoethanol or dithiothreitol also stimulates the incorporation, the latter at an optimum concentration of about 1 mm. 5. Under optimum conditions the Km value for the reaction is 0.28mM at 15°C. Nicotinamide inhibits the incorporation with a K, of 5.7uM. 6. Exogenous DNA stimulates the incorporation by about 100%. 7. Preincubation of the nuclei with deoxyribonuclease, but not with ribonuclease, almost completely inactivates the incorporation of NAD+. 8. The enzyme is unstable at both 00 and 15°C in the absence of dithiothreitol. The presence of dithiothreitol at a concentration of 1mM stabilizes the enzyme at both these temperatures. 9. The activity of this enzyme per nucleus was shown in three separate experiments to fall by about one-half in early S phase and then to rise to its pre-mitotic value after about 3 h, that is in late S phase. 10. The possible physiological function of this enzyme system is discussed.

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