Morphology and phylogeny of a new woodruffiid ciliate, Etoschophrya inornata sp. n. (Ciliophora, Colpodea, Platyophryida), with an account on evolution of platyophryids (original) (raw)
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Molecular Phylogeny of the Cyrtophorid Ciliates (Protozoa, Ciliophora, Phyllopharyngea)
2012
Evolutionary relationships of cyrtophorian ciliates are poorly known because molecular data of most groups within this subclass are lacking. In the present work, the SS rRNA genes belonging to 17 genera, 7 families of Cyrtophoria were sequenced and phylogenetic trees were constructed to assess their inter-generic relationships. The results indicated: (1) the assignment of cyrtophorians into two orders is consistently confirmed in all topologies; (2) the order Dysteriida is an outlined monophyletic assemblage while Chlamydodontida is paraphyletic with three separate monophyletic families; (3) Microxysma, which is currently assigned within the family Hartmannulidae, should be transferred to the family Dysteriidae; (4) the systematic position of Plesiotrichopidae remains unclear, yet the two genera that were placed in this family before, Pithites and Trochochilodon, should be transferred to Chlamydodontida; (5) a new family, Pithitidae n. fam., based on the type genus Pithites was suggested; and (6) the sequence of Isochona sp., the only available data of Chonotrichia so far, is probably from a misidentified species. In addition, three group I introns of SS rRNA gene were discovered in Aegyriana oliva, among which Aol.S516 is the first IE group intron reported in ciliates.
Journal of Eukaryotic Microbiology, 2011
We studied the morphology, morphometry, resting, and reproductive cysts, as well as the molecular phylogeny of Bryophrya gemmea n. sp., a colpodid ciliate that was discovered in ephemeral puddles in Idaho, northwest United States. This new species is distinguished from congeners by the irregularly pentagonal adoral organelles, four to five vestibular kineties, the single micronucleus, and one to three rows of brightly refractive protuberant interkinetal cortical granules to the right of the preoral suture. Resting cysts have two distinct membranes and an outer mucous coat. As typical for most colpodids, reproduction occurs in division cysts but details of ontogenesis are unknown. The 18S rRNA gene sequence shows only weak support for the phylogenetic relationship between Bryophrya and the bryophryid genus Notoxoma previously inferred from morphologic characters. Further, our molecular phylogenies classify bryophryids rather basal within the order Colpodida, not supporting ordinal status suggested by morphologists. Based on molecular data and morphologic characters, the colpodid genus Ilsiella is removed from the family Marynidae and placed in a new family, Ilsiellidae. Considering the molecular data, an evolutionary scenario for the formation of colpodid oral structures from a cyrtolophosidid ancestor through a bryophryid intermediate is proposed.
European Journal of Protistology, 2010
Morphology, ontogeny and the molecular phylogeny of Agolohymena aspidocauda nov. gen., nov. spec., a new freshwater tetrahymenid ciliate from Idaho, U.S.A, are described. The ontogeny and histophagous mode of nutrition are similar to those of Deltopylum rhabdoides Fauré-Fremiet and Mugard, 1946. The new genus is placed with Deltopylum in the resurrected family Deltopylidae Song & Wilbert, 1989. We emend the diagnostic features of the family to include division by polytomy, right and left somatic kineties extending into the preoral suture, crook-shaped or sigmoid adoral membranelles 1 and 2, markedly reduced adoral membranelle 3 and a tetrahymenid silverline pattern. The main diagnostic features of the new genus are a disc-shaped caudal ciliary array and formation of two types of resting cysts, one smooth and the other bearing tangled tubular or cylindrical lepidosomes. Nuclear small subunit ribosomal RNA gene and mitochondrial cytochrome oxidase subunit 1 gene sequences place the new genus basal within the order Tetrahymenida, well separated from members of the family Tetrahymenidae (Lambornella and Tetrahymena) and also from other tetrahymenids (Colpidium, Dexiostoma, Glaucoma). The genetic divergences between this species and other genera in Tetrahymenida are large enough to suggest placement of the new genus in a separate family. This corroborates the morphological data, since the elaborate caudal ciliary array and the lepidosome-covered resting cyst of this species are not found in other Tetrahymenidae.
Zoological Journal of the Linnean Society, 2016
The morphology and phylogeny of three heterotrich ciliates, Anigsteinia clarissima (Anigstein, 1912) Isquith, 1968, Blepharisma penardi sp. nov., and Blepharisma undulans Stein, 1867, were investigated based on living morphology, infraciliature, and small subunit (SSU) rDNA sequence data. The new species B. penardi sp. nov. is recognized by the following combination of characters: size about 150-180 × 45-55 μm in vivo, cell colour variable from colourless to pale pink to dark brownish; peristome extending to middle of body; 36-63 adoral membranelles; 24-34 somatic kineties; single macronucleus; cortical granules tiny and colourless; freshwater habitat. Anigsteinia clarissima and B. undulans are both reported from China for the first time and are redescribed based on a combination of previous descriptions and new data from the Chinese populations. Phylogenetic analyses based on SSU rDNA sequence data show that B. penardi sp. nov. and B. undulans are both located within a clade comprising only congeners, thus supporting the monophyly of the genus Blepharisma. Anigsteinia clarissima clusters with its only congener forming a clade that is sister to the Spirostomum assemblage. Both the morphological and the molecular data support the placement of Anigsteinia in the family Spirostomidae.
Science China-life Sciences, 2020
Heterotrichous ciliates play an important role in aquatic ecosystem energy flow processes and many are model organisms for research in cytology, regenerative biology, and toxicology. In the present study, we combine both morphological and molecular data to infer phylogenetic relationships at family-genus level and propose new evolutionary hypotheses for the class Heterotrichea. The main results include: (1) 96 new ribosomal DNA sequences from 36 populations, representing eight families and 13 genera, including three poorly annotated genera, Folliculinopsis, Ampullofolliculina and Linostomella; (2) the earliest-branching families are Spirostomidae in single-gene trees and Peritromidae in the concatenated tree, but the family Peritromidae probably represents the basal lineage based on its possession of many "primitive" morphological characters; (3) some findings in molecular trees are not supported by morphological evidence, such as the family Blepharismidae is one of the most recent branches and the relationship between Fabreidae and Folliculinidae is very close; (4) the systematic positions of Condylostomatidae, Climacostomidae, and Gruberiidae remain uncertain based either on morphological or molecular data; and (5) the monophyly of each genus included in the present study is supported by the molecular phylogenetic trees, except for Blepharisma in the SSU rDNA tree and Folliculina in the ITS1-5.8S-ITS2 tree.
European Journal of Protistology, 2011
Dileptid and tracheliid ciliates have been traditionally classified within the subclass Haptoria of the class Litostomatea. However, their phylogenetic position among haptorians has been controversial and indicated that they may play a key role in understanding litostomatean evolution. In order to reconstruct the evolutionary history of dileptids and tracheliids, and to unravel their affinity to other haptorians, we have used a cladistic approach based on morphological evidence and a phylogenetic approach based on 18S rRNA gene sequences, including eight new ones. The molecular trees demonstrate that dileptids and tracheliids represent a separate subclass, Rhynchostomatia, that is sister to the subclasses Haptoria and Trichostomatia. The Rhynchostomatia are characterized by a ventrally located oral opening at the base of a proboscis that carries a complex oral ciliature. We have recognized two orders within Rhynchostomatia. The new order Tracheliida is monotypic, while the order Dileptida comprises two families: the new, typically bimacronucleate family Dimacrocaryonidae and the multimacronucleate family Dileptidae. The Haptoria evolved from the last common ancestor of the Litostomatea by polarization of the body, the oral opening locating more or less apically and the oral ciliature simplifying. The Trichostomatia originated from a microaerophylic haptorian by further simplification of the oral ciliature, possibly due to an endosymbiotic lifestyle. © 2011 Elsevier GmbH. ⁎ Corresponding author. Tel.: +421 2 602 96 256; fax: +421 2 602 96 333. vdacny@fns.uniba.sk.
Journal of Eukaryotic Microbiology, 2004
ABSTRACT. We have used small subunit rRNA gene sequences to determine the phylogenetic relationships of species in three genera of endosymbiotic ciliates. We have confirmed that the astome Anoplophrya marylandensis is related to ciliates in the Class Oligohy-menophorea, supporting the view that astomes are derived from hymenostome-like ancestors. We confirmed that Plagiotoma lumbrici, formerly considered to be a heterotrich, is a stichotrich spirotrich ciliate most closely related to Paraurostyla weissei in this analysis. Thus, the somatic polykinetids of Plagiotoma can be concluded to be cirri. We report the details of our isolation of Nyctotheroides deslierresae and Nyctotheroides parvus and confirm previous reports that these clevelandellids are related to the metopid and caeno-morphid ciliates, now placed in the Class Armophorea.
Zoological Journal of the Linnean Society, 2016
The morphology and phylogeny of three heterotrich ciliates, Anigsteinia clarissima (Anigstein, 1912) Isquith, 1968, Blepharisma penardi sp. nov., and Blepharisma undulans Stein, 1867, were investigated based on living morphology, infraciliature, and small subunit (SSU) rDNA sequence data. The new species B. penardi sp. nov. is recognized by the following combination of characters: size about 150-180 × 45-55 μm in vivo, cell colour variable from colourless to pale pink to dark brownish; peristome extending to middle of body; 36-63 adoral membranelles; 24-34 somatic kineties; single macronucleus; cortical granules tiny and colourless; freshwater habitat. Anigsteinia clarissima and B. undulans are both reported from China for the first time and are redescribed based on a combination of previous descriptions and new data from the Chinese populations. Phylogenetic analyses based on SSU rDNA sequence data show that B. penardi sp. nov. and B. undulans are both located within a clade comprising only congeners, thus supporting the monophyly of the genus Blepharisma. Anigsteinia clarissima clusters with its only congener forming a clade that is sister to the Spirostomum assemblage. Both the morphological and the molecular data support the placement of Anigsteinia in the family Spirostomidae.