Modelling the epidemic dynamics of COVID-19 with consideration of human mobility (original) (raw)
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Modeling human mobility responses to the large-scale spreading of infectious diseases
2011
Current modeling of infectious diseases allows for the study of realistic scenarios that include population heterogeneity, social structures, and mobility processes down to the individual level. The advances in the realism of epidemic description call for the explicit modeling of individual behavioral responses to the presence of disease within modeling frameworks. Here we formulate and analyze a metapopulation model that incorporates several scenarios of self-initiated behavioral changes into the mobility patterns of individuals. We find that prevalence-based travel limitations do not alter the epidemic invasion threshold. Strikingly, we observe in both synthetic and data-driven numerical simulations that when travelers decide to avoid locations with high levels of prevalence, this self-initiated behavioral change may enhance disease spreading. Our results point out that the real-time availability of information on the disease and the ensuing behavioral changes in the population may produce a negative impact on disease containment and mitigation.
The impact of human mobility networks on the global spread of COVID-19
Journal of Complex Networks, 2020
Human mobility networks are crucial for a better understanding and controlling the spread of epidemics. Here, we study the impact of human mobility networks on the COVID-19 onset in 203 different countries. We use exponential random graph models to perform an analysis of the country-to-country global spread of COVID-19. We find that most countries had similar levels of virus spreading, with only a few acting as the main global transmitters. Our evidence suggests that migration and tourism inflows increase the probability of COVID-19 case importations while controlling for contiguity, continent co-location and sharing a language. Moreover, we find that air flights were the dominant mode of transportation while male and returning travellers were the main carriers. In conclusion, a mix of mobility and geography factors predicts the COVID-19 global transmission from one country to another. These findings have implications for non-pharmaceutical public health interventions and the management of transborder human circulation.
Journal of Computational Science, 2010
Here we present the Global Epidemic and Mobility (GLEaM) model that integrates sociodemographic and population mobility data in a spatially structured stochastic disease approach to simulate the spread of epidemics at the worldwide scale. We discuss the flexible structure of the model that is open to the inclusion of different disease structures and local intervention policies. This makes GLEaM suitable for the computational modeling and anticipation of the spatio-temporal patterns of global epidemic spreading, the understanding of historical epidemics, the assessment of the role of human mobility in shaping global epidemics, and the analysis of mitigation and containment scenarios.
On the use of human mobility proxy for the modeling of epidemics
2013
diseases. Correctly modeling and quantifying human mobility is critical for improving epidemic control policies, but may be hindered by incomplete data in some regions of the world. Here we explore the opportunity of using proxy data or models for individual mobility to describe commuting movements and predict the diffusion of infectious disease. We consider three European countries and the corresponding commuting networks at different resolution scales obtained from official census surveys, from proxy data for human mobility extracted from mobile phone call records, and from the radiation model calibrated with census data.
Human mobility and COVID-19 initial dynamics
Nonlinear Dynamics
Countries in Europe took different mobility containment measures to curb the spread of COVID-19. The European Commission asked mobile network operators to share on a voluntarily basis anonymised and aggregate mobile data to improve the quality of modelling and forecasting for the pandemic at EU level. In fact, mobility data at EU scale can help understand the dynamics of the pandemic and possibly limit the impact of future waves. Still, since a reliable and consistent method to measure the evolution of contagion at international level is missing, a systematic analysis of the relationship between human mobility and virus spread has never been conducted. A notable exceptions are France and Italy, for which data on excess deaths, an indirect indicator which is generally considered to be less affected by national and regional assumptions, are available at department and municipality level, respectively. Using this information together with anonymised and aggregated mobile data, this stu...
PLOS ONE, 2020
Mobile geolocation data is a valuable asset in the assessment of movement patterns of a population. Once a highly contagious disease takes place in a location the movement patterns aid in predicting the potential spatial spreading of the disease, hence mobile data becomes a crucial tool to epidemic models. In this work, based on millions of anonymized mobile visits data in Brazil, we investigate the most probable spreading patterns of the COVID-19 within states of Brazil. The study is intended to help public administrators in action plans and resources allocation, whilst studying how mobile geolocation data may be employed as a measure of population mobility during an epidemic. This study focuses on the states of São Paulo and Rio de Janeiro during the period of March 2020, when the disease first started to spread in these states. Metapopulation models for the disease spread were simulated in order to evaluate the risk of infection of each city within the states, by ranking them according to the time the disease will take to infect each city. We observed that, although the high-risk regions are those closer to the capital cities, where the outbreak has started, there are also cities in the countryside with great risk. The mathematical framework developed in this paper is quite general and may be applied to locations around the world to evaluate the risk of infection by diseases, in special the COVID-19, when geolocation data is available.
2020
ABSTRACTThe novel coronavirus disease (COVID-19) pandemic is a global threat presenting health, economic and social challenges that continue to escalate. Meta-population epidemic modeling studies in the susceptible-exposed-infectious-removed (SEIR) style have played important roles in informing public health and shaping policy making to mitigate the spread of COVID-19. These models typically rely on a key assumption on the homogeneity of the population. This assumption certainly cannot be expected to hold true in real situations; various geographic, socioeconomic and cultural environments affect the behaviors that drive the spread of COVID-19 in different communities. What’s more, variation of intra-county environments creates spatial heterogeneity of transmission in different sub-regions. To address this issue, we develop a new human mobility flow-augmented stochastic SEIR-style epidemic modeling framework with the ability to distinguish different regions and their corresponding be...
International Journal of Emerging Trends in Engineering Research, 2021
Modeling the propagation rate of diseases in a society via social interaction has continued to pose its many challenges. The recent spread of the covid-19 epidemic cannot be left out. Thus, social interactions heralds its many benefits and has becomes a vehicle for epidemic outbreaks-which has continually left the world puzzled as the disease itself has come to stay. The nature of its rapid propagation on exposure alongside its migration spread pattern of this contagion (with retrospect of other epidemics) on daily basis, has also left experts rethinking the set protocols. Our study models the spread propagation of the corona-virus contagion using the movement-interaction-return on a social graph. Thus, we seek to measure if the corona-virus (covid-19) spread propagation can be minimized alongside its death rate using movement pattern as a threshold feature and set of protocols. We design a Markovian block model to help minimize targeted propagation with the advent of seed-node(s) using the susceptible-infect structure on a time-varying graph. Study results showed that movement pattern must be employed as an imperative factors when modeling the propagation of contagion(s).
Interplay between intra-urban population density and mobility in determining the spread of epidemics
arXiv: Physics and Society, 2021
In this work, we address the connection between population density centers in urban areas, and the nature of human flows between such centers, in shaping the vulnerability to the onset of contagious diseases. A study of 163 cities, chosen from four different continents reveals a universal trend, whereby the risk induced by human mobility increases in those cities where mobility flows are predominantly between high population density centers. We apply our formalism to the spread of SARS-COV-2 in the United States, providing a plausible explanation for the observed heterogeneity in the spreading process across cities. Armed with this insight, we propose realistic mitigation strategies (less severe than lockdowns), based on modifying the mobility in cities. Our results suggest that an optimal control strategy involves an asymmetric policy that restricts flows entering the most vulnerable areas but allowing residents to continue their usual mobility patterns.
On the Use of Human Mobility Proxies for Modeling Epidemics
PLoS Computational Biology, 2014
diseases. Correctly modeling and quantifying human mobility is critical for improving epidemic control policies, but may be hindered by incomplete data in some regions of the world. Here we explore the opportunity of using proxy data or models for individual mobility to describe commuting movements and predict the diffusion of infectious disease. We consider three European countries and the corresponding commuting networks at different resolution scales obtained from official census surveys, from proxy data for human mobility extracted from mobile phone call records, and from the radiation model calibrated with census data.