Region 1.2 of the RNA polymerase sigma subunit controls recognition of the -10 promoter element (original) (raw)

Region 1.2 of the RNA polymerase σ subunit controls recognition of the −10 promoter element

Konstantin Severinov

The EMBO Journal, 2007

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The σ70 subunit of RNA polymerase mediates a promoter-proximal pause at the lac promoter

Richard Ebright

Nature Structural & Molecular Biology, 2004

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Region 2.5 of the Escherichia coli RNA polymerase σ70 subunit is responsible for the recognition of the 'extended −10' motif at promoters

Stephen Minchin

The EMBO Journal, 1997

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The Downstream DNA Jaw of Bacterial RNA Polymerase Facilitates Both Transcriptional Initiation and Pausing

Irina Artsimovitch

Journal of Biological Chemistry, 2002

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A Role for Interaction of the RNA Polymerase Flap Domain with the σ Subunit in Promoter Recognition

Konstantin Severinov

Science, 2002

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Konstantin Severinov

Research in Microbiology, 2002

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Mechanism of Bacterial Transcription Initiation: RNA Polymerase - Promoter Binding, Isomerization to Initiation-Competent Open Complexes, and Initiation of RNA Synthesis

Pieter Dehaseth

Journal of Molecular Biology, 2011

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Structural and mechanistic basis of σ-dependent transcriptional pausing

Hoa Vu

2022

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Remodeling of the σ70 Subunit Non-template DNA Strand Contacts During the Final Step of Transcription Initiation

Konstantin Severinov

Journal of Molecular Biology, 2005

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The Kinetics of Sigma Subunit Directed Promoter Recognition by E. coli RNA Polymerase

Iain Pemberton

Journal of Molecular Biology, 1999

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The role of RNA polymerase subunit in promoter-independent initiation of transcription

Konstantin Severinov

Proceedings of the National Academy of Sciences, 2004

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rRNA Promoter Regulation by Nonoptimal Binding of σ Region 1.2: An Additional Recognition Element for RNA Polymerase

Wilma Ross

Cell, 2006

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An intersubunit contact stimulating transcription initiation by E coli RNA polymerase: interaction of the alpha C-terminal domain and sigma region 4

Wilma Ross

Genes & development, 2003

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Evolution of promoter-proximal pausing enabled a new layer of transcription control

Alexandra Chivu

bioRxiv (Cold Spring Harbor Laboratory), 2023

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Identification of a contact site for different transcription activators in region 4 of the Escherichia coli RNA polymerase σ70 subunit

Carol Gross, Patricia Kiley

Journal of Molecular Biology, 1998

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Altered promoter recognition by mutant forms of the σ70 subunit of Escherichia coli RNA polymerase

Deborah Siegele

Journal of Molecular Biology, 1989

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The σ70 subunit of RNA polymerase induces lacUV5 promoter-proximal pausing of transcription

Hermann Heumann

Nature Structural & Molecular Biology, 2004

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Substitutions in the Escherichia coli RNA polymerase σ70 factor that affect recognition of extended −10 elements at promoters

Konstantin Severinov

FEBS Letters, 2003

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Cooperativity and interaction energy threshold effects in recognition of the -10 promoter element by bacterial RNA polymerase

Vladimir Mekler, Konstantin Severinov

Nucleic Acids Research, 2013

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Enhancer-dependent transcription by bacterial RNA polymerase: the beta subunit downstream lobe is used by sigma 54 during open promoter complex formation

Konstantin Severinov

Methods in enzymology, 2003

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Release of the .sigma. subunit from Escherichia coli RNA polymerase transcription complexes is dependent on the promoter sequence

Thomas Stackhouse

Biochemistry, 1989

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Specific Recognition of the -10 Promoter Element by the Free RNA Polymerase σ Subunit

Saulius Klimasauskas

Journal of Biological Chemistry, 2007

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RNA polymerase gate loop guides the nontemplate DNA strand in transcription complexes

Yuri Nedialkov

Proceedings of the National Academy of Sciences

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RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription

Richard Ebright

2019

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Changes in conserved region 2 of Escherichia coli sigma 70 affecting promoter recognition

Rex Wong

Journal of Molecular Biology, 1990

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Faculty of 1000 evaluation for The structure of a transcription activation subcomplex reveals how σ(70) is recruited to PhoB promoters

Katsu Murakami

F1000 - Post-publication peer review of the biomedical literature, 2011

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Positioning of σS, the stationary phase σ factor, in Escherichia coli RNA polymerase–promoter open complexes

Annie Kolb

The EMBO Journal, 1999

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A Coiled-Coil from the RNA Polymerase β′ Subunit Allosterically Induces Selective Nontemplate Strand Binding by σ70

Terrance Arthur

Cell, 2001

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Backtracked and paused transcription initiation intermediate of Escherichia coli RNA polymerase

Shimon Weiss

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Preferential interaction of the his pause RNA hairpin with RNA polymerase subunit residues 904-950 correlates with strong transcriptional pausing

Konstantin Severinov

Proceedings of the National Academy of Sciences, 1997

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In Vitro Studies of Transcript Initiation by Escherichia coli RNA Polymerase. 3. Influences of Individual DNA Elements within the Promoter Recognition Region on Abortive Initiation and Promoter Escape

Caroline Kane

Biochemistry, 2003

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Promoter recognition by Escherichia coli RNA polymerase. Effects of single base pair deletions and insertions in the spacer DNA separating the -10 and -35 regions are dependent on spacer DNA sequence

Pieter Dehaseth, M. Strainic

Biochemistry, 1993

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Conformational Flexibility in sigma 70 Region 2 during Transcription Initiation

Dick Burgess

Journal of Biological Chemistry, 2002

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Faculty of 1000 evaluation for In vitro transcription profiling of the σS subunit of bacterial RNA polymerase: re-definition of the σS regulon and identification of σS-specific promoter sequence elements

Herb Schellhorn

F1000 - Post-publication peer review of the biomedical literature, 2011

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