Recent advances in phylogeny and taxonomy of Near and Middle Eastern vipers–an update (original) (raw)
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Iranian Journal of Animal Biosystematics, 2023
Saw scaled vipers of the genus Echis belong to the family Viperidae and subfamily Viperinae. These vipers are widely distributed from East Africa to Southwest and Central Asia. Echis bite is one of the major causes of mortality in the world. Different populations of these medically important snakes have different venom composition, and the relevant antivenom is highly species-specific. Echis has a complex taxonomic history. For many years, only two species were recognized (i.e., Echis coloratus and E. carinatus). Over the past 50 years, the number of species have been raised to 12, of which six species reside in the Middle East. Phylogenetic studies show that the genus Echis fall into four species groups: the E. carinatus, E. coloratus, E. ocellatus and E. pyramidum groups. Until recently, only E. carinatus in Southwest Asia and India and E. coloratus in Arabia were assigned to the Middle East. Several morphological and phylogenetic studies raised the number of Echis species in the Middle East from two to six. These Middle Eastern vipers belong to three different species groups. An Asian, an Arabian and an African group. Distribution and basal split of the genus Echis, likely have been shaped by vicariance and tectonic events, which have separated or connected the land masses. In this study, a brief review on biogeography, taxonomy and distribution of the genus especially in the Middle East is presented.
2020
The Arabian Horned Viper, <i>Cerastes gasperettii</i>, is distributed along the eastern edge of the Sinai Peninsula south and east across the Arabian Peninsula to Iraq, Kuwait and western Iran comprising two subspecies: <i>Cerastes. g. mendelssohni</i> in the Arava valley (Israel and Jordan) and <i>C. g. gasperettii</i> in the Arabian Peninsula and southwestern Iran. Phylogenetic relationships based on Maximum Likelihood, Bayesian Inference, haplotype networks, and genetic divergence among different populations of <i>C. gasperettii</i> are analysed in this study. Two mitochondrial (<i>12S</i> and <i>Cytb</i>) and two nuclear partial genes (<i>C-mos</i> and <i>MC1R</i>) with uneven distribution among the individuals were used to infer phylogenetic relationships. Bayesian inference (BI) phylogenetic tree indicates a dichotomy separating a southern (Oman, UAE, Yemen) from a northern clade (I...
2018
A new species of blunt-nosed viper of the genus Macrovipera is described from the central and southern parts of Iran on the basis of morphological and molecular examination. The mitochondrial Cytb gene was used to investigate phylogenetic relationships amongst the Iranian species of the genus Macrovipera. A dataset with a final sequence length of 1043 nucleotides from 41 specimens from 18 geographically distant localities across Iran was generated. The findings demonstrated that two major clades with strong support can be identified within the genus Macrovipera in Iran. One clade consists of individuals belonging to a new species, which is distributed in the central and southern parts of Iran; the second clade includes two discernible subclades. The first subclade is distributed in western and northwestern Iran, Macrovipera lebetina obtusa, and the second subclade consists of northeastern populations, representing Macrovipera lebetina cernovi. The new species, Macrovipera razii sp. ...
Zoology in the Middle East, 2016
The Persian Horned Viper (Pseudocerastes persicus) is distributed from northeast Iraq through the Iranian Plateau to western Pakistan with isolated populations in the Hajar Mountains of southeastern Arabia. Like the other members of the genus Pseudocerastes, P. persicus is a sit-and-wait ambush feeder with low vagility, a characteristic that often results in high levels of population differentiation. In order to clarify the level of genetic variability, phylogenetic relationships, and biogeography of the Arabian populations of P. persicus we sequenced 597 base pairs of the mitochondrial cytochrome b of four individuals from the Hajar Mountains in southeastern Arabia and inferred their phylogenetic relationships including 10 samples of P. persicus from Iran and Pakistan, four P. urarachnoides and one P. fieldi downloaded from GenBank. The four Arabian samples are genetically very similar in the gene fragment analysed and are phylogenetically very closely related to populations of P. persicus from coastal south Iran. Biogeographically, it appears that colonisation of the Hajar Mountains by P. persicus took place from Iran very recently, most probably during the last glaciation, when most of the Persian Gulf was above sea level and did not represent a barrier for dispersal.
Zoology in the Middle East, 2016
The Saw-scaled vipers of the species Echis carinatus range from Sri Lanka and India westwards to Iraq, including the eastern Arabian Peninsula. We collected the species in southern Iraq and compared two mtDNA genes (16S and Cyt b) with other populations of this species and with other species of the genus. Analyses of both Maximum Likelihood and Bayesian Inference confirmed E. carinatus as a monophyletic species. The samples from Iraq cluster with populations of the species from Pakistan and UAE. Populations from India, however, are situated in a separate phylogenetic lineage. This can be explained by the geographic barriers between western (Iraq, Pakistan and UAE) and eastern (India) populations of the species. Soleyman Mountain in southern Pakistan is the main barrier between them and its role is reflected in the genetic distance between populations.
Molecular phylogenetics and evolution, 2009
We analyze the phylogeny of the medically important and taxonomically unresolved viper genus Echis using four mitochondrial gene fragments. The results show that the populations of the genus fall into four main clades: the Echis carinatus, E. coloratus, E. ocellatus and E. pyramidum groups. The E. pyramidum and E. coloratus groups are sister taxa but the interrelationships of this clade and the E. ocellatus and E. carinatus groups are unresolved. The initial divergence of the genus appears to coincide with the collision between Afro-Arabia and Eurasia, and that between the E. coloratus and E. pyramidum clades appears to be associated with the opening of the Red Sea. Later land connections between Africa and Arabia may have contributed to shaping the distribution of the E. pyramidum complex. The present distribution of E. carinatus may be the result of range expansion from southern India. Taxonomically, our results provide molecular evidence for the validity of Echis omanensis, E. kh...
This study was carried out to find viper specimens in Trabzon, situated in northeastern Turkey. During the study period, a total of 9 viper specimens were col|ected from new locations in Arpaözü (Caykara), Ballıca, Sugeldi (Of), and Çamlık (Vakfikebir), For morphometric studies, these specimens were examined, and for all of these specimens, 16 different items of data were collected. ln addition, collected data were compared with data from other vipers (Vipera barani and Vipera pontica) which are described from Rize, Artvin and Adapazarı. Trabzon viper specimens are characterised by partial fragmentation of frontal and parietals, high ventrals and loreals, fewer subcaudals and yellow green tail tips than in Vipera barani and Vipera pontica. When comparing the subalpine population (Arpaözü) with other lowland onbs (Of, Yomra and Vakfikebir), differences in apical and dorsal patterns could be detected. The Arpaözü population had one apical, which is normally found only in Vipera ursinii and occasionally inthe Vipera kaznakovicomplex (V, kaznakovi, V. dinnikiand V. darevskD. On the other hand, the number of apicals was 2 or 3 in Vipera barani and V, pontica. Aiso, the number of zigzag bands was low in the Arpaözü specimens (48-49 instead of 62-67 in the lowland specimens). As a result, it is clearly indicated that the new viper specimens from Trabzon show some similarities in colour patterns as well as scalation characters with V. barani and V, pontica. However, the number of circumoculars, loreals and crown scales is lower in our specimens than in both species. Taking into consideration the differences and similarities, the Trabzon specimens are most similar to V, barani
Molecular Phylogenetics and Evolution, 2001
Nucleotide sequences of mitochondrial cytochrome b and 16S rRNA genes, totaling 946 bp, were used to reconstruct a molecular phylogeny of 42 species of the subfamily Viperinae representing 12 of the 13 recognized genera. Maximum-parsimony and maximum-likelihood were used as methods for phylogeny reconstruction with and without a posteriori weighting. When representatives of the Causinae were taken as outgroup, five major monophyletic groups were consistently identified: Bitis, Cerastes, Echis, the Atherini (Atheris s.l.), and the Eurasian viperines. Proatheris was affiliated with Atheris, and Adenorhinos clustered within Atheris. The African Bitis consisted of at least three monophyletic groups: i) the B. gabonica group, (ii) the B. caudalis group, and (iii) the B. cornuta group. B. worthingtoni and B. arietans are not included in any of these lineages. Eurasian viperines could be unambiguously devided into four monophyletic groups: (i) Pseudocerastes and Eristicophis, (ii) European vipers (Vipera s.str.), (iii) Middle East Macrovipera plus Montivipera (Vipera xanthina group), and (iv) North African Macrovipera plus Vipera palaestinae and Daboia russelii. These evolutionary lineages are consistent with historical biogeographical patterns. According to our analyses, the viperines originated in the Oligocene in Africa and successively underwent a first radiation leading to the five basal groups. The radiation might have been driven by the possession of an effective venom apparatus and a foraging startegy (sit-wait-strike) superior in most African biomes and might have been adaptive. The next diversifications led to the Proatheris-Atheris furcation, the basal Bitis splitting, and the emergence of the basal lineages within the Eurasian stock. Thereafter, lineages within Echis, Atheris, and Cerastes evolved. The emergence of three groups within Vipera s.l. might have been forced by the existence of three land masses during the early Miocene in the area of the Paratethys and the Med-iterranean Seas. Taxonomic consequences of these findings are discussed.