Flexibility of Dicer Studied by Implicit Solvent Molecular Dynamics Simulations (original) (raw)

Profile image of Joanna SarzynskaJoanna Sarzynska

2010, Computational Methods in Science and Technology

visibility

description

8 pages

link

1 file

Sign up for access to the world's latest research.

checkGet notified about relevant papers

checkSave papers to use in your research

checkJoin the discussion with peers

checkTrack your impact

Molecular Dynamics Simulations: Insight into Molecular Phenomena at Interfaces

Sepideh Razavi

Langmuir, 2014

View PDFchevron_right

Molecular dynamics simulation of a liquid crystalline mixture

Robert A Shanks

The Journal of Chemical Physics, 1997

View PDFchevron_right

Molecular dynamics simulations of model oil/water/surfactant systems

Peter A J Hilbers

Colloids and Surfaces A: Physicochemical and Engineering Aspects, 1994

View PDFchevron_right

Molecular Modeling: Advancements and Applications

Andre Pimentel

Journal of Chemistry, 2013

View PDFchevron_right

Interactive Molecular Dynamics: Scaling up to Large Systems

Nicolas Férey

View PDFchevron_right

Integrating Molecular Dynamics Simulations with Chemical Probing Experiments Using SHAPE-FIT

Karissa Y. Sanbonmatsu

Methods in Enzymology, 2015

View PDFchevron_right

A Novel Implicit Solvent Model for Simulating the Molecular Dynamics of RNA

Tobin Sosnick

Biophysical Journal, 2013

View PDFchevron_right

Non-equilibrium behavior of equilibrium reservoirs in molecular simulations

Ale Garcia

2005

View PDFchevron_right

Reply to “Comment on ‘Efficient stress relaxation in molecular dynamics simulations of semiflexiblen-alkanes’ ”

Gerald Kneller

Physical Review E, 2001

View PDFchevron_right

Molecular Dynamics: The Computational Molecular Microscope

Mohamad R Kalani

Razavi International Journal of Medicine, 2014

View PDFchevron_right

Loading...

Loading Preview

Sorry, preview is currently unavailable. You can download the paper by clicking the button above.

Electronic continuum model for molecular dynamics simulations

A. Stuchebrukhov

The Journal of Chemical Physics, 2009

View PDFchevron_right

Molecular Dynamics simulations of liquid isoquinoline as a function of temperature

Norariza Ahmad

Chemical Physics, 2012

View PDFchevron_right

Molecular Mechanics: Method Development and Application to Lipids

Søren Balling Engelsen

View PDFchevron_right

Molecular-dynamics simulations of methane hydrate dissociation

Bjørn Kvamme

2005

View PDFchevron_right

Efficient Relaxation of Protein–Protein Interfaces by Discrete Molecular Dynamics Simulations

Modesto Orozco

Journal of Chemical Theory and Computation, 2013

View PDFchevron_right

Membrane protein structure quality in molecular dynamics simulation

George Patargias

Journal of Molecular Graphics and Modelling, 2005

View PDFchevron_right

NAMD: Biomolecular Simulation on Thousands of Processors

Sameer Kumar

ACM/IEEE 2002 Conference …, 2002

View PDFchevron_right

Complex fluid-dynamical phenomena modeled by large-scale molecular-dynamics simulations

Witold Dzwinel

Computers in Physics, 1998

View PDFchevron_right

Reduced variable molecular dynamics

James Turner

Journal of Computational Chemistry, 1995

View PDFchevron_right

Adaptive resolution molecular-dynamics simulation: Changing the degrees of freedom on the fly

Giovanni Ciccotti

The Journal of Chemical Physics, 2005

View PDFchevron_right

Molecular dynamics methodology for the study of the solvent effects on a concentrated Diels-Alder reaction and the separation of the post-reaction mixture

Paul Sharratt

Computers & Chemical Engineering, 1998

View PDFchevron_right

Separation of variables in molecular-dynamics simulations: A criterion to estimate the quality of the approximation

Adolfo Poma

Physical Review E, 2008

View PDFchevron_right

Molecular dynamics modelling of tethered organics in confined spaces

Michelle Birdsall Kidder

Molecular Simulation, 2011

View PDFchevron_right

Efficient Conformational Sampling in Explicit Solvent Using a Hybrid Replica Exchange Molecular Dynamics Method

Mark Olson

Journal of Chemical Theory and Computation, 2012

View PDFchevron_right

Metaphor of molecular dynamics and dielectric dispersion of morpholine with aprotic solvents

D.J.S.Anand Karunakaran BHC

Physics and Chemistry of Liquids

View PDFchevron_right

How a Vicinal Layer of Solvent Modulates the Dynamics of Proteins

Canan Atilgan

Biophysical Journal, 2008

View PDFchevron_right

A new reactive potential for the molecular dynamics simulation of liquid water

Bruno D'Aguanno

Chemical Physics Letters, 2007

View PDFchevron_right

Single-Molecule Mechanics and Force Spectroscopy

Dario Anselmetti

2015

View PDFchevron_right

Molecular simulation of mixing fluids and microhydrodynamic instabilities

Witold Dzwinel

Lecture Notes in Computer Science, 1996

View PDFchevron_right

Chemical reaction rates and solvent friction

James T. Hynes

Journal of Statistical Physics, 1986

View PDFchevron_right

Architectural Design and Preparation of Molecular Systems

Yoshio Nosaka

Springer eBooks, 1999

View PDFchevron_right

Non-Equilibrium Molecular Dynamics Simulation of Dendrimers under Shear

Leo Lue

View PDFchevron_right

Physics