The evolution of gene expression regulatory networks in yeasts (original) (raw)

Molecular evolution in the yeast transcriptional regulation network

Annette Evangelisti

Journal of Experimental Zoology …, 2004

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The topology of the transcription regulatory network in the yeast, Saccharomyces cerevisiae

Tamás Vicsek

Physica A: Statistical Mechanics and its Applications, 2003

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Computational Architecture of the Yeast Regulatory Network

Sergei Maslov

Physical biology, 2005

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Topological and causal structure of the yeast transcriptional regulatory network

Paul Bourgine

Nature Genetics, 2002

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Transcriptional Regulatory Networks in Saccharomyces cerevisiae

Julia Zeitlinger, John Wyrick

Science, 2002

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Evolutionary Models for Formation of Network Motifs and Modularity in the Saccharomyces Transcription Factor Network

Jonathan Ward

PLoS Computational Biology, 2007

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Assessing regulatory features of the current transcriptional network of Saccharomyces cerevisiae

Tiago Pedreira

Scientific Reports, 2020

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A qualitative analysis of ubiquitous regulatory motifs in Saccharomyces cerevisiae genetic networks

Erika Camacho

Communications in Nonlinear Science and Numerical Simulation, 2019

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Structure and evolution of transcriptional regulatory networks

Guilhem Chalancon

2010

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Global mapping of the yeast genetic interaction network

Josh Levinson

Science, 2004

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Global Analysis of the Regulatory Network Structure of Gene Expression in Saccharomyces cerevisiae

Yasufumi Murakami

DNA Research, 2004

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The Information Coded in the Yeast Response Elements Accounts for Most of the Topological Properties of Its Transcriptional Regulation Network

A. Erzan

PLoS ONE, 2007

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An evolutionary and functional assessment of regulatory network motifs

Aurélien Mazurie

Genome Biology, 2005

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Conservation and evolvability in regulatory networks: The evolution of ribosomal regulation in yeast

Ron Shamir

Proceedings of the National Academy of Sciences, 2005

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Inferring Gene Regulatory Networks from a Population of Yeast Segregants

Dabao Zhang

Scientific Reports, 2019

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Co-expression of adjacent genes in yeast cannot be simply attributed to shared regulatory system

Huai-kuang Tsai, Daryi Wang, Mei-yeh J Lu

BMC Genomics, 2007

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Organisation of the transcriptional regulation of genes involved in protein transactions in yeast

Stephen Oliver

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The transcription factor basal regulatory network of Homo sapiens and Saccharomyces cerevisiae: uncovering the relationship between topology and phenotype

Eva Navarro López

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Information propagation within the Genetic Network of Saccharomyces cerevisiae

sharif Chowdhury

BMC Systems Biology, 2010

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Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks

Becky Drees

Nature Genetics, 2008

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Expression evolution in yeast genes of single-input modules is mainly due to changes in trans-acting factors

Chih-jen Huang

Genome Research, 2007

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Information processing in the transcriptional regulatory network of yeast: Functional robustness

Frank Emmert-Streib

BMC Systems Biology, 2009

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A Simple Model of the Modular Structure of Transcriptional Regulation in Yeast

Nameeta Shah

Journal of Computational Biology, 2008

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A Yeast Hybrid Provides Insight into the Evolution of Gene Expression Regulation

Sharon Reikhav

Science, 2009

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Comparative analysis of the transcription-factor gene regulatory networks of E. coli and S. cerevisiae

Moisés Santillán

BMC systems biology, 2008

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Polygenic and directional regulatory evolution across pathways in Saccharomyces

Yulia Mostovoy

Proceedings of the National Academy of Sciences of the United States of America, 2010

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Transcriptional regulatory networks and the yeast cell cycle

Michael zhang

Current Opinion in Cell Biology, 2002

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Evolution of the yeast protein interaction network

Wen-hsiung Li

Proceedings of the National Academy of Sciences, 2003

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An improved map of conserved regulatory sites for Saccharomyces cerevisiae

Gary Stormo

BioMed Central Ltd, 2006

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Derivation, identification and validation of a computational model of a novel synthetic regulatory network in yeast

Lucia Marucci

Journal of Mathematical Biology, 2011

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