Halogen-Bond-Assisted Guest Inclusion in a Synthetic Cavity (original) (raw)

Halogen bonding (XB) is an attractive interaction between electrophilic halogen atoms in organic halides and Lewis bases, such as amines, ketones, ethers, and nucleophilic anions. [1, 2] This type of interaction has attracted considerable interest, but most studies on XB reported to date have relied solely on solid-state observations [3] or theoretical predictions and interpretations. [4] Although they also exist in solution, halogen-bonded systems in liquid media have received much less attention. [5-7] Previously,the self-assembled cage 1 (Figure 1) was shown to accommodate molecular aggregates, such as DNA duplexes [8] and fluorous aggregates. [9] In the confined space of 1,weak interactions within the aggregates are enhanced, as observed by both NMR spectroscopy and X-ray crystallography.The solution structures (NMR) were consistently the same as the solid-state structures (X-ray). In this study,we investigated halogen-bonded systems in the cavity of cage 1. We observed clear XB between iodoperfluorocarbons 2 and 3 (XB donors) and NO 3 À anions and/or H 2 Omolecules (XB acceptors). Both NMR spectroscopic and X-ray crystallographic studies suggested that XB assists guest inclusion. We also observed the pair-selective inclusion of an aromatic

Halogen bonding at work: recent applications in synthetic chemistry and materials science

CrystEngComm, 2013

Halogen bonding has recently entered the arena of reliable and valuable non-covalent interactions for the construction of supramolecular complexes. A step further, this highlight provides some new insights related to the design of advanced functional materials encompassing halogen bonded mesomorphic and electronic components. Other recent applications have been extended to various aspects of solution phase recognition (catalysis, ion sensing and resolution) and macromolecular organizations (porous, polymeric and hybrid systems).

Halogen Bonding: A Paradigm in Supramolecular Chemistry

Chemistry - A European Journal, 2001

The term halogen bonding describes the tendency of halogen atoms to interact with lone pair possessing atoms. The binding features and structural properties of halogen bonding are discussed and applied to drive the intermolecular self-assembly of hydrocarbons and perfluorocarbons in chemo-, site-, and enantioselective supramolecular synthesis. The halogen bonding is thus an effective and reliable tool in crystal engineering at the disposal of the supramolecular chemist.

Cyclic networks of halogen-bonding interactions in molecular self-assemblies: a theoretical N—X...NversusC—X...N investigation

Acta Crystallographica Section B: Structural Science, Crystal Engineering and Materials, 2017

The geometries and energetics of molecular self-assembly structures that contain a sequential network of cyclic halogen-bonding interactions are investigated theoretically. The strength of the halogen-bonding interactions is assessed by examining binding energies, electron charge transfer (NBO analysis) and electron density at halogen-bond critical points (AIM theory). Specifically, structural motifs having intramolecular N-XÁ Á ÁN (X = Cl, Br, or I) interactions and the ability to drive molecular self-assembly via the same type of interactions are used to construct larger self-assemblies of up to three unit motifs. N-XÁ Á ÁN halogen-bond cooperativity as a function of the self-assembly size, and the nature of the halogen atom is also examined. The cyclic network of the halogenbonding interactions provides a suitable cavity rich in electron density (from the halogen atom lone pairs not involved in the halogen bonds) that can potentially bind an electron-deficient species such as a metal ion. This possibility is explored by examining the ability of the N-XÁ Á ÁN network to bind Na +. Likewise, molecular self-assembly structures driven by the weaker C-XÁ Á ÁN halogenbonding interactions are investigated and the results compared with those of their N-XÁ Á ÁN counterparts. halogen bonding Acta Cryst. (2017). B73, 179-187 Parra and Castillo Cyclic networks of halogen-bonding interactions 187

Halogen Bonding: A Halogen-Centered Noncovalent Interaction Yet to Be Understood

Inorganics, 2019

In addition to the underlying basic concepts and early recognition of halogen bonding, this paper reviews the conflicting views that consistently appear in the area of noncovalent interactions and the ability of covalently bonded halogen atoms in molecules to participate in noncovalent interactions that contribute to packing in the solid-state. It may be relatively straightforward to identify Type-II halogen bonding between atoms using the conceptual framework of σ-hole theory, especially when the interaction is linear and is formed between the axial positive region (σ-hole) on the halogen in one monomer and a negative site on a second interacting monomer. A σ-hole is an electron density deficient region on the halogen atom X opposite to the R–X covalent bond, where R is the remainder part of the molecule. However, it is not trivial to do so when secondary interactions are involved as the directionality of the interaction is significantly affected. We show, by providing some specifi...

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