Integrated requirement of non-specific and sequence-specific DNA binding in MYC-driven transcription (original) (raw)
The alternatively initiated c-Myc proteins differentially regulate transcription through a noncanonical DNA-binding site
Linda Sealy
Genes & Development, 1994
View PDFchevron_right
Different promoter affinities account for specificity in MYC-dependent gene regulation
Caroline Kisker
eLife, 2016
View PDFchevron_right
Generic binding sites, generic DNA-binding domains: where does specific promoter recognition come from?
Adrien Georges
The FASEB Journal, 2010
View PDFchevron_right
Sequence specificity incompletely defines the genome-wide occupancy of Myc
Raluca Gordân
Genome Biology, 2014
View PDFchevron_right
c-Myc Target Gene Specificity is Determined by a Post-DNA-Binding Mechanism
Kathryn Boyd
Proceedings of The National Academy of Sciences, 1998
View PDFchevron_right
Selective transcriptional regulation by Myc: Experimental design and computational analysis of high-throughput sequencing data
Stefano de Pretis
Data in Brief, 2015
View PDFchevron_right
Dissecting transcriptional amplification by MYC
Stoney Simons
eLife
View PDFchevron_right
I-Motif Structures Formed in the Human c-MYC Promoter Are Highly Dynamic–Insights into Sequence Redundancy and I-Motif Stability
Emmanuel Hatzakis
PLOS One, 2010
View PDFchevron_right
Non-DNA-binding cofactors enhance DNA-binding specificity of a transcriptional regulatory complex
Sidra Khan
Molecular Systems Biology, 2011
View PDFchevron_right
The Chromatin Structure of the Dual c-myc Promoter P1/P2 Is Regulated by Separate Elements
Gertraud Stelzer
Journal of Biological Chemistry, 2001
View PDFchevron_right
A sequence-specific, single-strand binding protein activates the far upstream element of c-myc and defines a new DNA-binding motif
Gregory Michelotti
Genes & Development, 1994
View PDFchevron_right
Positive control mutations in the MyoD basic region fail to show cooperative DNA binding and transcriptional activation in vitro
Eyal Bengal
Proceedings of the National Academy of Sciences, 1994
View PDFchevron_right
Myc represses transcription through recruitment of DNA methyltransferase corepressor
Arantxa Gutierrez
The EMBO Journal, 2004
View PDFchevron_right
In silico identification of transcriptional regulators associated with c-Myc
Ron Shamir
Nucleic Acids Research, 2004
View PDFchevron_right
E-box-independent regulation of transcription and differentiation by MYC
S. Benitah, Arantxa Gutierrez
Nature Cell Biology, 2011
View PDFchevron_right
A nuclease hypersensitive element in the human c-myc promoter adopts several distinct i-tetraplex structures
M. Vorlickova
Biochemical and Biophysical …, 2000
View PDFchevron_right
Contribution of nucleosome binding preferences and co-occurring DNA sequences to transcription factor binding
Sam John
BMC Genomics, 2013
View PDFchevron_right
Integration of genome and chromatin structure with gene expression profiles to predict c-MYC recognition site binding and function
Yili Chen, David States
PLoS computational biology, 2007
View PDFchevron_right
Transcription factor binding at enhancers: shaping a genomic regulatory landscape in flux
Robert-Jan Palstra
Frontiers in Genetics, 2012
View PDFchevron_right
Highly conserved features of DNA binding between two divergent members of the Myb family of transcription factors
Benoit Pinson
Nucleic Acids Research, 2001
View PDFchevron_right
Acting locally and globally: Myc's ever-expanding roles on chromatin
Natalia Varlakhanova
Cancer research, 2009
View PDFchevron_right
Stimulation of Myc transactivation by the TATA binding protein in promoter-reporter assays
John Barrett
2005
View PDFchevron_right
Absence of a simple code: how transcription factors read the genome
Matthew Slattery, Remo Rohs, Raluca Gordân
Trends in Biochemical Sciences, 2014
View PDFchevron_right
Chromatin regulates genome-wide transcription factor binding affinities
Colin Logie
bioRxiv, 2022
View PDFchevron_right
A Triplex-forming Sequence from the Human c-MYC Promoter Interferes with DNA Transcription
Philip Hanawalt
Journal of Biological Chemistry, 2007
View PDFchevron_right
DNA oxidation drives Myc mediated transcription
Enrico V. Avvedimento
Cell Cycle, 2010
View PDFchevron_right
Promoter type influences transcriptional topography by targeting genes to distinct nucleoplasmic sites
PETER COOK
Journal of Cell Science, 2013
View PDFchevron_right
The transcriptional control proteins c-Myb and v-Myb contain a basic region DNA binding motif
Richard Mott
FEBS Letters, 1991
View PDFchevron_right
A conserved acidic patch in the Myb domain is required for activation of an endogenous target gene and for chromatin binding
Ray Ko
Molecular Cancer, 2008
View PDFchevron_right
Homotypic clusters of transcription factor binding sites are a key component of human promoters and enhancers
Amber Afroz
2010
View PDFchevron_right
Integrative analysis of RNA polymerase II and transcriptional dynamics upon MYC activation
Alessandro Verrecchia
Genome Research, 2017
View PDFchevron_right
Decoupling of divergent gene regulation by sequence-specific DNA binding factors
Michael Mwangi
Nucleic Acids Research, 2015
View PDFchevron_right
Nuclear factor E2F mediates basic transcription and trans-activation by E1a of the human MYC promoter
Marilda Lipp
Genes & Development, 1989
View PDFchevron_right