Molecular rulers for measuring RNA structure: sites of crosslinking in chlorambucilyl-phenylalanyl-tRNAPhe (yeast) and chlorambucilyl-pentadecaprolyl-phenylalanyl-tRNAPhe (yeast) intramolecularly crosslinked in aqueous solution (original ) (raw )Molecular rulers with 5 or 11 prolines intramolecularly crosslink to G45 of yeast phenylalanine tRNA
Eric Wickstrom
FEBS Letters, 1981
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Site-directed cross-linking studies on the E.coli tRNA ribosome complex: determination of sites labelled with an aromatic azide attached to the variable loop or aminoacyl group of tRNA
Philip J Mitchell
Nucleic Acids Research, 1993
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Comparison of the tertiary structure of yeast tRNAAsp and tRNAPhe in solution
Denis Moras
Journal of Molecular Biology, 1987
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Synthesis and intramolecular crosslinking of chlorambucilyl (prolyl)n [3H]phenylalanyl-tRNAPhe (yeast), n = 0, 5, 11 and 15
Eric Wickstrom
Biochimica et Biophysica Acta (BBA) - Nucleic Acids and Protein Synthesis, 1981
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The structure of a pre-mRNA molecule in solution determined with a site directed cross-linking reagent
John Teare
Nucleic Acids Research, 1990
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Short-Range RNA-RNA Crosslinking Methods to Determine rRNA Structure and Interactions
Stanislav Kirillov
Methods, 2001
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Design, Synthesis, and Analysis of Yeast tRNA Phe Analogs Possessing Intra- and Interhelical Disulfide Cross-Links
Jay Goodwin
Journal of The American Chemical Society, 1996
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Identification of form III conformers in tRNAPhe from Escherichia coli by intramolecular photo-cross-linking
Yolande Lemaigre-Dubreuil
Biochemistry, 1986
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Neighbourhood of the central fold of the tRNA molecule bound to the E.coli ribosome—affinity labeling studies with modified tRNAs carrying photoreactive probes attached to the dihydrouridine loop
J. Podkowinski
Nucleic Acids Research, 1991
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Site-directed cross-linking of mRNA analogues to 16S ribosomal RNA; a complete scan of cross-links from all positions between ‘+ 1’ and ‘+ 16’ on the mRNA, downstream from the decoding site
Jutta Rinke-Appel
Nucleic Acids Research, 1993
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Chlorambucilyl [3 H]phenylalanyl-tRNA crosslinking to 50 S ribosomal subunit proteins L4, L26-27 and L18-20
Eric Wickstrom
FEBS Letters, 1981
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Atomic co-ordinates for yeast phenylalanine tRNA
Iván Canales Valenzuela
Nucleic Acids Research, 1975
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Towards the Discovery of Oligonucleotide Cross-Linking Agents
Bhaskar Halami
2019
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Quantitative evaluation of the lengths of homobifunctional protein cross-linking reagents used as molecular rulers
Emil Reisler
Protein Science, 2008
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Trans-diamminedichloroplatinum(II), a reversible RNA-protein cross-linking agent. Application to the ribosome and to an aminoacyl-tRNA synthetase/tRNA complex
Marylène Mougel , Michael Tukalo
Biochemistry, 1987
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Base-pairing between distant regions of the Escherichia coli 16 S ribosomal RNA in solution
P. Wollenzien
Journal of Molecular Biology, 1979
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Recognition by T factor of a tRNAphe yeast molecule recombined from 3′and 5′ halves; and its non messenger-dependent binding to ribosomes
Do Tien Thang
FEBS Letters, 1971
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Multiple crosslinks of proteins S7, S9, S13 to domains 3 and 4 of 16S RNA in the 30S particle
Eliane Hajnsdorf
Nucleic Acids Research, 1986
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Transit of tRNA through the Escherichia coli Ribosome. CROSS-LINKING OF THE 3' END OF tRNA TO SPECIFIC NUCLEOTIDES OF THE 23 S RIBOSOMAL RNA AT THE A, P, AND E SITES
Jacek Wower
Journal of Biological Chemistry, 2000
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Contacts between the growing peptide chain and the 23S RNA in the 50S ribosomal subunit
D. Bochkariov
Nucleic Acids Research, 1994
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Comparison of Escherichia coli tRNAPhe in the Free State, in the Ternary Complex and in the Ribosomal A and P Sites by Chemical Probing
Stephen Douthwaite
European Journal of Biochemistry, 1983
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The use of 2-iminothiolane as an RNA-protein cross-linking agent in Escherichia coli ribosomes, and the localisation on 23S RNA of sites cross-linked to proteins L4, L6, L21, L23, L27 and L29
Iwona Wower
Nucleic Acids Research, 1981
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Base-Pairing between 23S rRNA and tRNA in the Ribosomal A Site
Rachel Green
Molecular Cell, 1999
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Mechanism of Discrimination between Cognate and Non-cognate tRNs by Phenylalanyl-tRNA:Synthetase from Yeast
Detlev Riesner
European Journal of Biochemistry, 1976
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Selective isolation and detailed analysis of intra-RNA cross-links induced in the large ribosomal subunit of E. coli: a model for the tertiary structure of the tRNA binding domain in 23S RNA
Philip J Mitchell
Nucleic Acids Research, 1990
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Structure of yeast phenylalanine transfer RNA at 2.5 A resolution
Iván Canales Valenzuela
Proceedings of the National Academy of Sciences, 1975
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Crosslinking of Escherichia coli 50S ribosomal subunits with chlorambucilyl oligoprolyl phenylalanyltRNA molecular rulers
Keith Parker
Nucleic Acids Research, 1983
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The use of azidoarylimidoesters in RNA-protein cross-linking studies with Escherichia coli ribosomes
Jutta Rinke-Appel
Journal of Molecular Biology, 1980
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New RNA-protein crosslinks in domains 1 and 2 of E.coli 30S ribosomal subunits obtained by means of an intrinsic photoaffinity probe
Eliane Hajnsdorf
Nucleic Acids Research, 1989
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Cross-linking with bifunctional reagents and its application to the study of the molecular symmetry and the arrangement of subunits in hexameric protein oligomers
Yossi Tsfadia
Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 2010
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Affinity labeling of Escherichia coli phenylalanyl-tRNA synthetase at the binding site for tRNAPhe
Codjo Hountondji
Biochemistry, 1987
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A Distinctive RNA Fold: The Solution Structure of an Analogue of the Yeast tRNAPhe TΨC Domain
Karl Koshlap
Biochemistry, 1999
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Singly and Bifurcated Hydrogen-bonded Base-pairs in tRNA Anticodon Hairpins and Ribozymes
E. Westhof
Journal of Molecular Biology, 1999
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