Building better enzymes: Molecular basis of improved non‐natural nucleobase incorporation by an evolved DNA polymerase
Isha Singh
Protein Science, 2019
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Directed Evolution of Polymerases To Accept Nucleotides with Nonstandard Hydrogen Bond Patterns
NICOLE FERNANDA MORA LEAL
Biochemistry, 2013
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Computational delineation of the catalytic step of a high-fidelity DNA polymerase
Ravindra Venkatramani
Protein Science, 2010
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Nucleoside 5′-triphosphates modified at sugar residues as substrates for DNA polymerase from the thermoacidophilic archaebacterium Sulfolobus acidocaldarius
Marina Kukhanova
Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression, 1989
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DNA Polymerase β: Contributions of Template-Positioning and dNTP Triphosphate-Binding Residues to Catalysis and Fidelity
Alexander Showalter
Biochemistry, 2000
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Perspective: pre-chemistry conformational changes in DNA polymerase mechanisms
Tamar Schlick
Theoretical Chemistry Accounts, 2012
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Structural and functional analyses of the interaction of archaeal RNA polymerase with DNA
Magdalena Wojtas
Nucleic Acids Research, 2012
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Insight into the Catalytic Mechanism of DNA Polymerase β: Structures of Intermediate Complexes † , ‡
Michael Chan
Biochemistry, 2001
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Structure and mechanism of DNA polymerases
Paul Rothwell
Advances in protein chemistry, 2005
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KlenTaq polymerase replicates unnatural base pairs by inducing a Watson-Crick geometry
Phillip Ordoukhanian
2012
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Evolving a Polymerase for Hydrophobic Base Analogues
José Gallego
Journal of the American Chemical Society, 2009
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Insight into the Catalytic Mechanism of DNA Polymerase beta : Structures of Intermediate Complexes
Alexander Showalter
Biochemistry, 2001
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Expanding the repertoire of DNA polymerase substrates: template-instructed incorporation of non-nucleoside triphosphate analogues by DNA polymerases and
Giovanni Maga
Nucleic Acids Research, 2006
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Structure of a bifunctional DNA primase-polymerase
Georg Lipps
Nature Structural & Molecular Biology, 2004
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Kinetic analysis of N-alkylaryl carboxamide hexitol nucleotides as substrates for evolved polymerases
Shrinivas Dumbre
Nucleic Acids Research, 2019
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Probing the Interaction of Archaeal DNA Polymerases with Deaminated Bases Using X-ray Crystallography and Non-Hydrogen Bonding Isosteric Base Analogues
Eric Kool
Biochemistry, 2010
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Structural Insights into the Post-Chemistry Steps of Nucleotide Incorporation Catalyzed by a DNA Polymerase
Rajan Vyas
Journal of the American Chemical Society, 2017
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Escherichia coli DNA Polymerase I (Klenow Fragment) Uses a Hydrogen-bonding Fork from Arg668 to the Primer Terminus and Incoming Deoxynucleotide Triphosphate to Catalyze DNA Replication
Maureen Blandino
Journal of Biological Chemistry, 2004
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DNA Polymerases: An Insight into Their Active Sites and Catalytic Mechanism
Peramachi Palanivelu
International Journal of Biochemistry Research and Review, 2013
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Structural insight into the substrate specificity of DNA Polymerase μ
Andrea Moon
Nature Structural & Molecular Biology, 2006
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Significance of the O-Helix Residues of Escherichia coli DNA Polymerase I in DNA Synthesis: Dynamics of the dNTP Binding Pocket †
Virendra Pandey
Biochemistry, 1996
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Archaebacterial DNA Polymerases Tightly Bind Uracil-containing DNA
Ayoub Rashtchian
Journal of Biological Chemistry, 1996
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Directed evolution of DNA polymerase, RNA polymerase and reverse transcriptase activity in a single polypeptide
Szymon Jarosławski, Gan Ph
Journal of molecular biology, 2006
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The effect of oxidatively damaged DNA on the active site pre-organization during nucleotide incorporation in a high fidelity polymerase from Bacillus stearothermophilus
Ravindra Venkatramani
2008
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Nucleotide-Induced DNA Polymerase Active Site Motions Accommodating a Mutagenic DNA Intermediate
Vinod Batra
Structure, 2005
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The crystal structure of a natural DNA polymerase complexed with mirror DNA
Men Duong
Chemical Communications, 2020
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Methods for Molecular Evolution of Polymerases
Dmitry Stetsenko
Russian Journal of Bioorganic Chemistry, 2019
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New substrates of DNA polymerases
Alexander Skoblov
FEBS Letters, 1999
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Effect of oxidatively damaged DNA on the active site preorganization during nucleotide incorporation in a high fidelity polymerase from Bacillus stearothermophilus
Ravindra Venkatramani
Proteins: Structure, Function, and Bioinformatics, 2007
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Prokaryotic DNA polymerase I: evolution, structure, and “base flipping” mechanism for nucleotide selection
Lawrence Loeb
Journal of Molecular Biology, 2001
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Structure-Based Mutational Study of an Archaeal DNA Ligase towards Improvement of Ligation Activity
Yoshizumi Ishino
ChemBioChem, 2012
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DNA Polymerase Template Interactions Probed by Degenerate Isosteric Nucleobase Analogs
V. J . Davisson
Chemistry & Biology, 2003
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Cooperative dynamics of a DNA polymerase replicating complex
Arnout Ceulemans
Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 2013
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