BaseSpaceR (original) (raw)
R SDK for BaseSpace RESTful API
Bioconductor version: Release (3.19)
A rich R interface to Illumina's BaseSpace cloud computing environment, enabling the fast development of data analysis and visualisation tools.
Author: Adrian Alexa
Maintainer: Jared O'Connell
Citation (from within R, enter citation("BaseSpaceR")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BaseSpaceR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BaseSpaceR")Details
| biocViews | ConnectTools, DataImport, DataRepresentation, Genetics, HighThroughputSequencing, Infrastructure, Sequencing, Software |
|---|---|
| Version | 1.48.0 |
| In Bioconductor since | BioC 2.12 (R-3.0) (11.5 years) |
| License | Apache License 2.0 |
| Depends | R (>= 2.15.0), RCurl, RJSONIO |
| Imports | methods |
| System Requirements | |
| URL |
See More
| Suggests | RUnit, IRanges, Rsamtools |
|---|---|
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BaseSpaceR_1.48.0.tar.gz |
|---|---|
| Windows Binary | BaseSpaceR_1.48.0.zip |
| macOS Binary (x86_64) | BaseSpaceR_1.48.0.tgz |
| macOS Binary (arm64) | BaseSpaceR_1.48.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/BaseSpaceR |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BaseSpaceR |
| Bioc Package Browser | https://code.bioconductor.org/browse/BaseSpaceR/ |
| Package Short Url | https://bioconductor.org/packages/BaseSpaceR/ |
| Package Downloads Report | Download Stats |