GladiaTOX (original) (raw)

This is the released version of GladiaTOX; for the devel version, seeGladiaTOX.

R Package for Processing High Content Screening data

Bioconductor version: Release (3.20)

GladiaTOX R package is an open-source, flexible solution to high-content screening data processing and reporting in biomedical research. GladiaTOX takes advantage of the tcpl core functionalities and provides a number of extensions: it provides a web-service solution to fetch raw data; it computes severity scores and exports ToxPi formatted files; furthermore it contains a suite of functionalities to generate pdf reports for quality control and data processing.

Author: Vincenzo Belcastro [aut, cre], Dayne L Filer [aut], Stephane Cano [aut]

Maintainer: PMP S.A. R Support <DL.RSupport at pmi.com>

Citation (from within R, enter citation("GladiaTOX")):

Installation

To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GladiaTOX")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GladiaTOX")

Details

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Package Archives

Follow Installation instructions to use this package in your R session.