PAIRADISE (original) (raw)

PAIRADISE: Paired analysis of differential isoform expression

Bioconductor version: Release (3.19)

This package implements the PAIRADISE procedure for detecting differential isoform expression between matched replicates in paired RNA-Seq data.

Author: Levon Demirdjian, Ying Nian Wu, Yi Xing

Maintainer: Qiang Hu <Qiang.Hu at roswellpark.org>, Levon Demirdjian

Citation (from within R, enter citation("PAIRADISE")):

Installation

To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PAIRADISE")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PAIRADISE")

Details

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Follow Installation instructions to use this package in your R session.