SNPediaR (original) (raw)
This is the released version of SNPediaR; for the devel version, seeSNPediaR.
Query data from SNPedia
Bioconductor version: Release (3.20)
SNPediaR provides some tools for downloading and parsing data from the SNPedia web site . The implemented functions allow users to import the wiki text available in SNPedia pages and to extract the most relevant information out of them. If some information in the downloaded pages is not automatically processed by the library functions, users can easily implement their own parsers to access it in an efficient way.
Author: David Montaner [aut, cre]
Maintainer: David Montaner <david.montaner at gmail.com>
Citation (from within R, enter citation("SNPediaR")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("SNPediaR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SNPediaR")
Details
biocViews | SNP, Software, VariantAnnotation |
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Version | 1.32.0 |
In Bioconductor since | BioC 3.4 (R-3.3) (8 years) |
License | GPL-2 |
Depends | R (>= 3.0.0) |
Imports | RCurl, jsonlite |
System Requirements | |
URL | https://github.com/genometra/SNPediaR |
Bug Reports | https://github.com/genometra/SNPediaR/issues |
See More
Suggests | BiocStyle, knitr, rmarkdown, testthat |
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Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | SNPediaR_1.32.0.tar.gz |
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Windows Binary (x86_64) | |
macOS Binary (x86_64) | SNPediaR_1.32.0.tgz |
macOS Binary (arm64) | SNPediaR_1.32.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/SNPediaR |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/SNPediaR |
Bioc Package Browser | https://code.bioconductor.org/browse/SNPediaR/ |
Package Short Url | https://bioconductor.org/packages/SNPediaR/ |
Package Downloads Report | Download Stats |