onlineFDR (original) (raw)
This is the released version of onlineFDR; for the devel version, seeonlineFDR.
Online error rate control
Bioconductor version: Release (3.20)
This package allows users to control the false discovery rate (FDR) or familywise error rate (FWER) for online multiple hypothesis testing, where hypotheses arrive in a stream. In this framework, a null hypothesis is rejected based on the evidence against it and on the previous rejection decisions.
Author: David S. Robertson [aut, cre], Lathan Liou [aut], Aaditya Ramdas [aut], Adel Javanmard [ctb], Andrea Montanari [ctb], Jinjin Tian [ctb], Tijana Zrnic [ctb], Natasha A. Karp [aut]
Maintainer: David S. Robertson <david.robertson at mrc-bsu.cam.ac.uk>
Citation (from within R, enter citation("onlineFDR")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("onlineFDR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("onlineFDR")
Advanced usage of onlineFDR | HTML | R Script |
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The theory behind onlineFDR | HTML | R Script |
Using the onlineFDR package | HTML | R Script |
Reference Manual | ||
NEWS | Text |
Details
biocViews | MultipleComparison, Software, StatisticalMethod |
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Version | 2.14.0 |
In Bioconductor since | BioC 3.8 (R-3.5) (6 years) |
License | GPL-3 |
Depends | |
Imports | stats, Rcpp, progress |
System Requirements | |
URL | https://dsrobertson.github.io/onlineFDR/index.html |
See More
Suggests | knitr, rmarkdown, testthat, covr |
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Linking To | Rcpp, RcppProgress |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | onlineFDR_2.14.0.tar.gz |
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Windows Binary (x86_64) | onlineFDR_2.14.0.zip |
macOS Binary (x86_64) | onlineFDR_2.14.0.tgz |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/onlineFDR |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/onlineFDR |
Bioc Package Browser | https://code.bioconductor.org/browse/onlineFDR/ |
Package Short Url | https://bioconductor.org/packages/onlineFDR/ |
Package Downloads Report | Download Stats |