quantro (original) (raw)

This is the released version of quantro; for the devel version, seequantro.

A test for when to use quantile normalization

Bioconductor version: Release (3.21)

A data-driven test for the assumptions of quantile normalization using raw data such as objects that inherit eSets (e.g. ExpressionSet, MethylSet). Group level information about each sample (such as Tumor / Normal status) must also be provided because the test assesses if there are global differences in the distributions between the user-defined groups.

Author: Stephanie Hicks [aut, cre] ORCID: 0000-0002-7858-0231 , Rafael Irizarry [aut] ORCID: 0000-0002-3944-4309

Maintainer: Stephanie Hicks

Citation (from within R, enter citation("quantro")):

Installation

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("quantro")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("quantro")

Details

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Follow Installation instructions to use this package in your R session.