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		PDBsum entry 1xer Go to PDB code: Electron transport PDB id 1xer Loading ... Contents Protein chain 103 a.a.* Ligands F3S ×2 Metals _ZN Waters ×31 * Residue conservation analysis PDB id: 1xer Links PDBe RCSB MMDB JenaLib Proteopedia CATH SCOP PDBSWS PDBePISA ProSAT Name: Electron transport Title: Structure of ferredoxin Structure: Ferredoxin. Chain: a Source: Sulfolobus tokodaii str. 7. Organism_taxid: 273063. Strain: strain 7 Resolution: 2.00Å R-factor: 0.173 R-free: 0.244 Authors: T.Fujii,Y.Hata,H.Moriyama,T.Wakagi,N.Tanaka,T.Oshima Key ref: T.Fujii et al. (1996). Novel zinc-binding centre in thermoacidophilic archaeal ferredoxins.Nat Struct Biol,3, 834-837.PubMed id: 8836097 Date: 28-Aug-96 Release date: 04-Sep-97 PROCHECK Headers References Protein chain ? P55907 (FER1_SULTO) - Zinc-containing ferredoxin-1 from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) Seq:Struc: 104 a.a. 103 a.a.* Key: PfamA domain Secondary structure CATH domain * PDB and UniProt seqs differ at 1 residue position (black cross) Nat Struct Biol 3:834-837 (1996) PubMed id: 8836097 Novel zinc-binding centre in thermoacidophilic archaeal ferredoxins. T.Fujii, Y.Hata, T.Wakagi, N.Tanaka, T.Oshima. ABSTRACT No abstract given. Literature references that cite this PDB file's key reference PubMed id Reference 15889648 E.J.Milner-White, and M.J.Russell (2005). Sites for phosphates and iron-sulfur thiolates in the first membranes: 3 to 6 residue anion-binding motifs (nests). Orig Life Evol Biosph,35, 19-27. 12757943 T.Wakagi (2003). Sulerythrin, the smallest member of the rubrerythrin family, from a strictly aerobic and thermoacidophilic archaeon, Sulfolobus tokodaii strain 7. FEMS Microbiol Lett,222, 33-37. 11842205 G.Fritz, A.Roth, A.Schiffer, T.Büchert, G.Bourenkov, H.D.Bartunik, H.Huber, K.O.Stetter, P.M.Kroneck, and U.Ermler (2002). Structure of adenylylsulfate reductase from the hyperthermophilic Archaeoglobus fulgidus at 1.6-A resolution. Proc Natl Acad Sci U S A,99, 1836-1841. PDB codes: 1jnr 1jnz 11859083 S.T.Jeong, H.K.Kim, S.J.Kim, S.W.Chi, J.G.Pan, T.K.Oh, and S.E.Ryu (2002). Novel zinc-binding center and a temperature switch in the Bacillus stearothermophilus L1 lipase. J Biol Chem,277, 17041-17047. PDB code: 1ku0 11463610 B.W.Beck, Q.Xie, and T.Ichiye (2001). Sequence determination of reduction potentials by cysteinyl hydrogen bonds and peptide pipoles in [4Fe-4S] ferredoxins. Biophys J,81, 601-613. 11287669 H.Fukuzawa, K.Miura, K.Ishizaki, K.I.Kucho, T.Saito, T.Kohinata, and K.Ohyama (2001). Ccm1, a regulatory gene controlling the induction of a carbon-concentrating mechanism in Chlamydomonas reinhardtii by sensing CO2 availability. Proc Natl Acad Sci U S A,98, 5347-5352. 10995250 M.L.VanZile, N.J.Cosper, R.A.Scott, and D.P.Giedroc (2000). The zinc metalloregulatory protein Synechococcus PCC7942 SmtB binds a single zinc ion per monomer with high affinity in a tetrahedral coordination geometry. Biochemistry,39, 11818-11829. 10477309 G.Schäfer, M.Engelhard, and V.Müller (1999). Bioenergetics of the Archaea. Microbiol Mol Biol Rev,63, 570-620. 10447676 K.Kojoh, H.Matsuzawa, and T.Wakagi (1999). Zinc and an N-terminal extra stretch of the ferredoxin from a thermoacidophilic archaeon stabilize the molecule at high temperature. Eur J Biochem,264, 85-91. 10438486 N.J.Cosper, C.M.Stålhandske, H.Iwasaki, T.Oshima, R.A.Scott, and T.Iwasaki (1999). Structural conservation of the isolated zinc site in archaeal zinc-containing ferredoxins as revealed by x-ray absorption spectroscopic analysis and its evolutionary implications. J Biol Chem,274, 23160-23168. 9063899 T.Fujii, Y.Hata, M.Oozeki, H.Moriyama, T.Wakagi, N.Tanaka, and T.Oshima (1997). The crystal structure of zinc-containing ferredoxin from the thermoacidophilic archaeon Sulfolobus sp. strain 7. Biochemistry,36, 1505-1513. The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB codes are shown on the right.