ENCBS417IIV – ENCODE (original) (raw)
- Biosamples
- [cell line](/search/?type=Biosample&biosample%5Fontology.classification=cell line&status=released "Search for cell line in released Biosamples")
- [_Homo sapiens_](/search/?type=Biosample&biosample%5Fontology.classification=cell line&organism.scientific%5Fname=Homo sapiens&status=released "Search for cell line and Homo sapiens in released Biosamples")
- [A549](/search/?type=Biosample&biosample%5Fontology.classification=cell line&organism.scientific%5Fname=Homo sapiens&biosample%5Fontology.term%5Fname=A549&status=released "Search for cell line and Homo sapiens and A549 in released Biosamples")
ENCBS417IIV / cell line
Summary
Term name
A549
Term ID
Summary
Homo sapiens A549 cell line treated with 100 nM dexamethasone (agonist) for 1 hour
Culture harvest date
2015-03-16
Attribution
Genomics of Gene Regulation Project
Lab
Tim Reddy, Duke
Award PI
Tim Reddy, Duke
Submitted by
Aditi Narayanan
Source
Project
GGR
Aliases
tim-reddy:H3K9me3.t1_rep3
Treatment details
Treatment
100 nM dexamethasone (CHEBI:41879) for 1 hour
Type
chemical (agonist)
Purpose
perturbation
Donor information
Accession
Aliases
encode:donor of A549, bradley-bernstein:Donor of A549 cells, john-stamatoyannopoulos:ATCC_A549
Species
Homo sapiens
Life stage
adult
Age
58 years
Sex
male
Ethnicity
European
Documents
treatment protocol
Description: ChIP_DEX_treatment_protocol
Submitted by
Linda Hong
Lab
Tim Reddy, Duke
Grant
treatment protocol
Description: DNase-seq DEX treatment
Submitted by
Linda Hong
Lab
Tim Reddy, Duke
Grant
treatment protocol
Description: ECC-1 ER induction
Submitted by
Richard Myers
Lab
Richard Myers, HAIB
Grant
treatment protocol
Description: RNA-seq_DEX_treatment_protocol
Submitted by
Linda Hong
Lab
Tim Reddy, Duke
Grant
treatment protocol
Description: Cell Growth Protocol for T-47D Cell Line
Submitted by
John Stamatoyannopoulos
Lab
John Stamatoyannopoulos, UW
Grant