American Society of Human Genetics 2016: ENCODE DCC Uniform Processing Pipelines – ENCODE (original) (raw)
Friday October 21, 2016, 7:15AM
Vancouver, British Columbia
We plan a highly interactive workshop, with time for hands-on exercises and your questions.
Workshop Agenda
- Introduction to the ENCODE Uniform Processing Pipelines
- Standard ENCODE data processing pipelines and how to replicate ENCODE analyses on your own data using the DNA Nexus platform
- Exploring the Portal (www.encodeproject.org)
- What can YOU do with this new tool?
All slides and materials from the workshop are on this page.
For questions or more information contact:
J. Michael Cherry, Ph.D.
E-mail: cherry@stanford.edu; encode-help@lists.stanford.edu
| No. | Presentation Title | Presenter | Organization | Additional materials |
|---|---|---|---|---|
| 1 | Prepare to run web-based pipelines | Jean Davidson, Ph.D | ENCODE DCC, Stanford University | DNA Nexus account creation |
| 2 | Data Access, Availability, and Processing at the ENCODE Portal | Jean Davidson, Ph.D | ENCODE DCC, Stanford University | ChIP-seq Pipeline How-to |
| 3 | Overview of ENCODE portal | Jean Davidson, Ph.D | ENCODE DCC, Stanford University | Full presentation |