Life rather than climate influences diversity at scales greater than 40 million years (original) (raw)
Gould, S. J. The Structure of Evolutionary Theory (Harvard Univ. Press, 2002).
Lovejoy, S. A voyage through scales, a missing quadrillion and why the climate is not what you expect. Clim. Dynam.44, 3187–3210 (2015). Article Google Scholar
Barnosky, A. D. Distinguishing the effects of the Red Queen and Court Jester on Miocene mammal evolution in the northern Rocky Mountains. J. Vertebr. Paleontol.21, 172–185 (2001). Article Google Scholar
Van Valen, L. A new evolutionary law. Evol. Theory1, 1–30 (1973). Google Scholar
Sepkoski, J. J. J. in Evolutionary Paleobiology (eds Jablonski, D. et al.) 211–255 (Univ. of Chicago Press, 1996).
Cornette, J. L. & Lieberman, B. S. Random walks in the history of life. Proc. Natl Acad. Sci. USA101, 187–191 (2004). ArticleADSCASPubMed Google Scholar
Hoffman, A. in Neutral Models in Biology (eds Nitecki, M. H. & Hoffman, A.)133–146 (Oxford Univ. Press, 1987).
Benton, M. J. The Red Queen and the Court Jester: species diversity and the role of biotic and abiotic factors through time. Science323, 728–732 (2009). ArticleADSCASPubMed Google Scholar
Alroy, J. The shifting balance of diversity among major marine animal groups. Science329, 1191–1194 (2010). ArticleADSCASPubMed Google Scholar
Alroy, J. Geographical, environmental and intrinsic biotic controls on Phanerozoic marine diversification. Palaeontology53, 1211–1235 (2010). Article Google Scholar
Close, R. A. et al. The apparent exponential radiation of Phanerozoic land vertebrates is an artefact of spatial sampling biases. Proc. R. Soc. B287, 20200372 (2020). ArticlePubMedPubMed Central Google Scholar
Foote, M. in Evolution after Darwin: The first 150 years (eds Bell, M. A. et al.) 479–510 (Sinauer Associates, 2010).
Foote, M., Cooper, R. A., Crampton, J. S. & Sadler, P. M. Diversity-dependent evolutionary rates in early Palaeozoic zooplankton. Proc. R. Soc. B285, 20180122 (2018). ArticlePubMedPubMed Central Google Scholar
Alroy, J. et al. Phanerozoic trends in the global diversity of marine invertebrates. Science321, 97–100 (2008). ArticleADSCASPubMed Google Scholar
Lovejoy, S. Spectra, intermittency, and extremes of weather, macroweather and climate. Sci. Rep.8, 12697 (2018).
Eichenseer, K. et al. Jurassic shift from abiotic to biotic control on marine ecological success. Nat. Geosci.12, 638–642 (2019). ArticleCAS Google Scholar
Patzkowsky, M. E. Origin and evolution of regional biotas: a deep-time perspective. Annu. Rev. Earth Planet. Sci.45, 471–495 (2017). ArticleADSCAS Google Scholar
Jablonski, D. Approaches to macroevolution: 2. Sorting of variation, some overarching issues, and general conclusions. Evol. Biol.44, 451–475 (2017). ArticlePubMedPubMed Central Google Scholar
Rosenzweig, M. L. Species Diversity in Space and Time (Cambridge Univ Press, 1995).
Gould, S. J. The paradox of the first tier: an agenda for paleobiology. Paleobiology11, 2–12 (1985). Article Google Scholar
Erwin, D. H. in Chance in Evolution (eds Ramsey, G. & and Pence, C. H.) 279–298 (Univ. Chicago Press, 2016).
Jablonski, D. Scale and hierarchy in macroevolution. Palaeontology50, 87–109 (2007). Article Google Scholar
Newman, M. & Palmer, R. Modeling Extinction (Oxford Univ. Press, 2003).
Lovejoy, S. & Schertzer, D. Haar wavelets, fluctuations and structure functions: convenient choices for geophysics. Nonlin. Processes Geophys.19, 513–527 (2012).
Plotnick, R. E. & Sepkoski, J. J. J. A multiplicative multifractal model of originations and extinctions. Paleobiology27, 126–139 (2001). Article Google Scholar
Alroy, J. A more precise speciation and extinction rate estimator. Paleobiology41, 633–639 (2015). Article Google Scholar
Song, H., Wignall, P. B., Song, H., Dai, X. & Chu, D. Seawater temperature and dissolved oxygen over the past 500 million years. J. Earth Sci.30, 236–243 (2019). Article Google Scholar
Veizer, J. et al. 87Sr/86Sr, δ13C and δ18O evolution of Phanerozoic seawater. Chem. Geol.161, 59–88 (1999). ArticleADSCAS Google Scholar
O’Brien, C. L. et al. Cretaceous sea-surface temperature evolution: constraints from TEX86 and planktonic foraminiferal oxygen isotopes. Earth Sci. Rev.172, 224–247 (2017). ArticleADS Google Scholar
Lovejoy, S. Weather, Macroweather, and the Climate: Our Random Yet Predictable Atmosphere (Oxford Univ. Press, 2019).
Cuthill, J. F. H., Guttenberg, N. & Budd, G. E. Impacts of speciation and extinction measured by an evolutionary decay clock. Nature588, 636–641 (2020). ArticleADS Google Scholar
Crampton, J. S., Cooper, R. A., Sadler, P. M. & Foote, M. Greenhouse–icehouse transition in the Late Ordovician marks a step change in extinction regime in the marine plankton. Proc. Natl Acad. Sci. USA113, 1498–1503 (2016). ArticleADSCASPubMedPubMed Central Google Scholar
Van Dam, J. A. et al. Long-period astronomical forcing of mammal turnover. Nature443, 687–691 (2006). ArticleADSPubMed Google Scholar
Roopnarine, P. D. Extinction cascades and catastrophe in ancient food webs. Paleobiology32, 1–19 (2006). Article Google Scholar
Close, R. A., Benson, R. B. J., Saupe, E. E., Clapham, M. E. & Butler, R. J. The spatial structure of Phanerozoic marine animal diversity. Science368, 420–424 (2020). ArticleADSCASPubMed Google Scholar
Eldredge, N. Unfinished Synthesis: Biological Hierarchies and Modern Evolutionary Thought (Oxford Univ. Press, 1985).
Lieberman, B. S., MillerIII, W. & Eldredge, N. Paleontological patterns, macroecological dynamics and the evolutionary process. Evol. Biol.34, 28–48 (2007). Article Google Scholar
Lam, A. R., Stigall, A. L. & Matzke, N. J. Dispersal in the Ordovician: speciation patterns and paleobiogeographic analyses of brachiopods and trilobites. Palaeogeogr. Palaeoclimatol. Palaeoecol.489, 147–165 (2018). Article Google Scholar
DeMets, C., Gordon, R. G., Argus, D. F. & Stein, S. Current plate motions. Geophys. J. Int.101, 425–478 (1990). ArticleADS Google Scholar
Valentine, J. W., Foin, T. C. & Peart, D. A provincial model of Phanerozoic marine diversity. Paleobiology4, 55–66 (1978). Article Google Scholar
Button, D. J., Lloyd, G. T., Ezcurra, M. D. & Butler, R. J. Mass extinctions drove increased global faunal cosmopolitanism on the supercontinent Pangaea. Nat. Commun.8, 733 (2017).
Spiridonov, A. et al. Integrated record of Ludlow (Upper Silurian) oceanic geobioevents—coordination of changes in conodont, and brachiopod faunas, and stable isotopes. Gondwana Res.51, 272–288 (2017). ArticleADSCAS Google Scholar
Sheehan, P. & Coorough, P. Brachiopod zoogeography across the Ordovician–Silurian extinction event. Geol. Soc. Lond. Mem.12, 181–187 (1990). Article Google Scholar
Borrelli, J. J. et al. Selection on stability across ecological scales. Trends Ecol. Evol.30, 417–425 (2015). ArticlePubMed Google Scholar
Stanley, S. M. Predation defeats competition on the seafloor. Paleobiology34, 1–21 (2008). Article Google Scholar
Spiridonov, A., Brazauskas, A. & Radzevičius, S. Dynamics of abundance of the mid- to late Pridoli conodonts from the eastern part of the Silurian Baltic Basin: multifractals, state shifts, and oscillations. Am. J. Sci.316, 363–400 (2016). ArticleADS Google Scholar
Lovejoy, S. & Schertzer, D. The Weather and Climate: Emergent Laws and Multifractal Cascades (Cambridge Univ. Press, 2013).
Cornette, J. L., Lieberman, B. S. & Goldstein, R. H. Documenting a significant relationship between macroevolutionary origination rates and Phanerozoic pCO2 levels. Proc. Natl Acad. Sci. USA99, 7832–7835 (2002). ArticleADSCASPubMedPubMed Central Google Scholar
Hannisdal, B. & Peters, S. E. Phanerozoic Earth system evolution and marine biodiversity. Science334, 1121–1124 (2011). ArticleADSCASPubMed Google Scholar
Mayhew, P. J., Bell, M. A., Benton, T. G. & McGowan, A. J. Biodiversity tracks temperature over time. Proc. Natl Acad. Sci. USA109, 15141–15145 (2012). ArticleADSCASPubMedPubMed Central Google Scholar
Mathes, G. H., van Dijk, J., Kiessling, W. & Steinbauer, M. J. Extinction risk controlled by interaction of long-term and short-term climate change. Nat. Ecol. Evol.5, 304–310 (2021). ArticlePubMed Google Scholar
Mathes, G. H., Kiessling, W. & Steinbauer, M. J. Deep-time climate legacies affect origination rates of marine genera. Proc. Natl Acad. Sci. USA118, e2105769118 (2021).
Roberts, G. G. & Mannion, P. D. Timing and periodicity of Phanerozoic marine biodiversity and environmental change. Sci. Rep.9, 6116 (2019).
Žliobaitė, I. & Fortelius, M. On calibrating the completometer for the mammalian fossil record. Paleobiology48, 1–11 (2021).
Valentine, J. W. & Walker, T. D. Diversity trends within a model taxonomic hierarchy. Physica D22, 31–42 (1986). ArticleADSMathSciNet Google Scholar
Sepkoski, J. J. & Kendrick, D. C. Numerical experiments with model monophyletic and paraphyletic taxa. Paleobiology19, 168–184 (1993). ArticlePubMed Google Scholar
Crampton, J. S., Cooper, R. A., Foote, M. & Sadler, P. M. Ephemeral species in the fossil record? Synchronous coupling of macroevolutionary dynamics in mid-Paleozoic zooplankton. Paleobiology46, 123–135 (2020). Article Google Scholar
Sepkoski, J. J. Ten years in the library: new data confirm paleontological patterns. Paleobiology19, 43–51 (1993). ArticlePubMed Google Scholar
Alroy, J. Successive approximations of diversity curves: ten more years in the library. Geology28, 1023–1026 (2000). ArticleADS Google Scholar
R Core Team. R: A Language and Environment for Statistical Computing (R Foundation for Statistical Computing, 2015).
Kocsis, A. T., Reddin, C. J., Alroy, J. & Kiessling, W. The R package divDyn for quantifying diversity dynamics using fossil sampling data. Methods Ecol. Evol.10, 735–743 (2019). Article Google Scholar
Kocsis, A. T., Alroy, J., Reddin, C. J. & Kiessling, W. Phanerozoic-scale global marine biodiversity analysis with the R package divDyn v0.7. divDyn vignette (2019).
Fan, J.-x et al. A high-resolution summary of Cambrian to Early Triassic marine invertebrate biodiversity. Science367, 272–277 (2020). ArticleADSCASPubMed Google Scholar
Raup, D. M. Cohort analysis of generic survivorship. Paleobiology4, 1–15 (1978). Article Google Scholar
Raup, D. M. Mathematical models of cladogenesis. Paleobiology11, 42–52 (1985). Article Google Scholar
Foote, M. Pulsed origination and extinction in the marine realm. Paleobiology40, 6–20 (2005). Article Google Scholar
Payne, J. L. & Heim, N. A. Body size, sampling completeness, and extinction risk in the marine fossil record. Paleobiology46, 23–40 (2020). Article Google Scholar
Goldberg, S. L., Present, T. M., Finnegan, S. & Bergmann, K. D. A high-resolution record of early Paleozoic climate. Proc. Natl Acad. Sci. USA118, e2013083118 (2021).
Schrag, D. P., DePaolo, D. J. & Richter, F. M. Reconstructing past sea surface temperatures: correcting for diagenesis of bulk marine carbonate. Geochim. Cosmochim. Acta59, 2265–2278 (1995). ArticleADSCAS Google Scholar
Miller, K. G. et al. The Phanerozoic record of global sea-level change. Science310, 1293–1298 (2005). ArticleADSCASPubMed Google Scholar
Van der Meer, D. et al. Reconstructing first-order changes in sea level during the Phanerozoic and Neoproterozoic using strontium isotopes. Gondwana Res.44, 22–34 (2017). ArticleADS Google Scholar
Müller, R. D. & Dutkiewicz, A. Oceanic crustal carbon cycle drives 26-million-year atmospheric carbon dioxide periodicities. Sci. Adv.4, eaaq0500 (2018). ArticleADSPubMedPubMed Central Google Scholar
Kiessling, W. Long-term relationships between ecological stability and biodiversity in Phanerozoic reefs. Nature433, 410–413 (2005). ArticleADSCASPubMed Google Scholar
McKinney, M. L. & Oyen, C. W. Causation and nonrandomness in biological and geological time series: temperature as a proximal control of extinction and diversity. Palaios4, 3–15 (1989). ArticleADS Google Scholar