Check results for 'fda.usc' (original) (raw)

• using R Under development (unstable) (2024-10-11 r87226)
• using platform: x86_64-pc-linux-gnu
• R was compiled by clang version 19.1.1 flang-new version 19.1.1
• running under: Fedora Linux 36 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘fda.usc/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘fda.usc’ version ‘2.1.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘fda.usc’ can be installed ... [75s/100s] OK See the install log for details.
• used C compiler: ‘clang version 19.1.1’
• used Fortran compiler: ‘flang-new version 19.1.1’
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking whether startup messages can be suppressed ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [194s/235s] OK
• checking Rd files ... NOTEcheckRd: (-1) FDR.Rd:23-24: Lost braces 23 | \item \code{out.FDR}{ \code{=TRUE}. If there are significative | ^ checkRd: (-1) FDR.Rd:25: Lost braces 25 | \item \code{pv.FDR}{ p-value for False Discovery Rate test.} | ^ checkRd: (-1) LMDC.select.Rd:71: Lost braces 71 | \item \code{cor}{ the value of distance correlation for each covariate.} | ^ checkRd: (-1) LMDC.select.Rd:72: Lost braces 72 | \item \code{maxLocal}{ index or locations of local maxima distance correlations.} | ^ checkRd: (-1) LMDC.select.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) LMDC.select.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) LMDC.select.Rd:78: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) LMDC.select.Rd:79: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) Outliers.fdata.Rd:53: Lost braces 53 | \item \code{outliers}{ Indexes of functional outlier.} | ^ checkRd: (-1) Outliers.fdata.Rd:54: Lost braces 54 | \item \code{dep.out}{ Depth value of functional outlier.} | ^ checkRd: (-1) Outliers.fdata.Rd:55: Lost braces 55 | \item \code{dep.out}{ Iteration in which the functional outlier is detected.} | ^ checkRd: (-1) Outliers.fdata.Rd:56: Lost braces 56 | \item \code{quantile}{ Threshold for outlier detection.} | ^ checkRd: (-1) Outliers.fdata.Rd:57: Lost braces 57 | \item \code{dep}{ Depth value of functional data.} | ^ checkRd: (-1) Outliers.fdata.Rd:83: Lost braces 83 | Cuevas A, Febrero M, Fraiman R. 2006. \emph{On the use of bootstrap for estimating functions with functional data.} Computational Statistics and Data Analysis 51: 1063{-}1074. | ^ checkRd: (-1) Outliers.fdata.Rd:85: Lost braces 85 | Febrero-Bande, M., Galeano, P., and Gonzalez-Manteiga, W. (2008). \emph{Outlier detection in functional data by depth measures with application to identify abnormal NOx levels}. Environmetrics 19, 4, 331{-}345. | ^ checkRd: (-1) Outliers.fdata.Rd:87: Lost braces 87 | Febrero-Bande, M., Galeano, P. and Gonzalez-Manteiga, W. (2007). \emph{A functional analysis of NOx levels: location and scale estimation and outlier detection}. Computational Statistics 22, 3, 411{-}427. | ^ checkRd: (-1) S.np.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) S.np.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) S.np.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) S.np.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) S.np.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) accuracy.Rd:46: Lost braces 46 | \item \code{accuracy}{ the accuracy classification score} | ^ checkRd: (-1) accuracy.Rd:47: Lost braces 47 | \item \code{recall}, \code{sensitivity,TPrate}{ \eqn{R=TP/(TP+FN)}} | ^ checkRd: (-1) accuracy.Rd:48: Lost braces 48 | \item \code{precision}{ \eqn{P=TP/(TP+FP)}} | ^ checkRd: (-1) accuracy.Rd:49: Lost braces 49 | \item \code{specificity},\code{TNrate}{ \eqn{TN/(TN+FP)}} | ^ checkRd: (-1) accuracy.Rd:50: Lost braces 50 | \item \code{FPrate}{ \eqn{FP/(TN+FP)}} | ^ checkRd: (-1) accuracy.Rd:51: Lost braces 51 | \item \code{FNrate}{ \eqn{FN/(TP+FN)}} | ^ checkRd: (-1) accuracy.Rd:52: Lost braces 52 | \item \code{Fmeasure}{ \eqn{2/(1/R+1/P)}} | ^ checkRd: (-1) accuracy.Rd:53: Lost braces 53 | \item \code{Gmean}{ \eqn{sqrt(R*TN/(TN+FP))}} | ^ checkRd: (-1) accuracy.Rd:54: Lost braces 54 | \item \code{kappa}{ the kappa index} | ^ checkRd: (-1) accuracy.Rd:55: Lost braces 55 | \item \code{cost}{ \eqn{sum(diag(tab)/rowSums(tab)*cost)/sum(cost)}} | ^ checkRd: (-1) accuracy.Rd:56: Lost braces 56 | \item \code{IOU}{ \eqn{TP/(TP+FN+FP)}} mean of Intersection over Union | ^ checkRd: (-1) accuracy.Rd:57: Lost braces 57 | \item \code{IOU4class}{ \eqn{TP/(TP+FN+FP)}} Intersection over Union by level | ^ checkRd: (-1) accuracy.Rd:61: Lost braces 61 | \item \code{MSE}{ Mean squared error, \eqn{\frac{\sum{(ypred- yobs)^2}}{n} }{\sum (ypred- yobs)^2 /n }} | ^ checkRd: (-1) accuracy.Rd:62: Lost braces 62 | \item \code{RMSE}{ Root mean squared error \eqn{\sqrt{\frac{\sum{(ypred- yobs)^2}}{n} }}{\sqrt(\sum (ypred- yobs)^2 /n )}} | ^ checkRd: (-1) accuracy.Rd:63: Lost braces 63 | \item \code{MAE}{ Mean Absolute Error, \eqn{\frac{\sum |yobs - ypred|}{n}}{\sum |yobs - ypred| /n}} | ^ checkRd: (-1) classif.DD.Rd:50-51: Lost braces 50 | \item \code{group.est} {Estimated vector groups by classified method | ^ checkRd: (-1) classif.DD.Rd:52: Lost braces; missing escapes or markup? 52 | \item \code{misclassification} { Probability of misclassification.} | ^ checkRd: (-1) classif.DD.Rd:53: Lost braces; missing escapes or markup? 53 | \item \code{prob.classification} { Probability of correct classification by group level.} | ^ checkRd: (-1) classif.DD.Rd:54-55: Lost braces 54 | \item \code{dep} { Data frame with the depth of the curves for functional data (or points for multivariate data) in | ^ checkRd: (-1) classif.DD.Rd:56: Lost braces; missing escapes or markup? 56 | \item \code{depth} { Character vector specifying the type of depth functions used.} | ^ checkRd: (-1) classif.DD.Rd:57: Lost braces 57 | \item \code{par.depth} { List of parameters for \code{depth} function.} | ^ checkRd: (-1) classif.DD.Rd:58: Lost braces; missing escapes or markup? 58 | \item \code{classif} { Type of classifier used.} | ^ checkRd: (-1) classif.DD.Rd:59: Lost braces 59 | \item \code{par.classif}{ List of parameters for \code{classif} procedure.} | ^ checkRd: (-1) classif.DD.Rd:60: Lost braces 60 | \item \code{w}{ Optional case weights.} | ^ checkRd: (-1) classif.DD.Rd:61: Lost braces 61 | \item \code{fit}{ Fitted object by \code{classif} method using the depth as covariate.} | ^ checkRd: (-1) classif.ML.Rd:103: Lost braces 103 | \item \code{formula}{ formula.} | ^ checkRd: (-1) classif.ML.Rd:104: Lost braces 104 | \item \code{data}{ List that containing the variables in the model.} | ^ checkRd: (-1) classif.ML.Rd:105: Lost braces 105 | \item \code{group}{ Factor of length \emph{n}} | ^ checkRd: (-1) classif.ML.Rd:106: Lost braces 106 | \item \code{group.est}{ Estimated vector groups} | ^ checkRd: (-1) classif.ML.Rd:107: Lost braces 107 | \item \code{prob.classification}{ Probability of correct classification by group.} | ^ checkRd: (-1) classif.ML.Rd:108-109: Lost braces 108 | \item \code{prob.group}{ Matrix of predicted class probabilities. For each | ^ checkRd: (-1) classif.ML.Rd:110: Lost braces 110 | \item \code{max.prob}{ Highest probability of correct classification.} | ^ checkRd: (-1) classif.depth.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.depth.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.depth.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.depth.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.depth.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.depth.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.gkam.Rd:65: Lost braces 65 | \item \code{formula}{ formula.} | ^ checkRd: (-1) classif.gkam.Rd:66: Lost braces 66 | \item \code{data}{ List that containing the variables in the model.} | ^ checkRd: (-1) classif.gkam.Rd:67: Lost braces 67 | \item \code{group}{ Factor of length \emph{n}} | ^ checkRd: (-1) classif.gkam.Rd:68: Lost braces 68 | \item \code{group.est}{ Estimated vector groups} | ^ checkRd: (-1) classif.gkam.Rd:69: Lost braces 69 | \item \code{prob.classification}{ Probability of correct classification by group.} | ^ checkRd: (-1) classif.gkam.Rd:70-71: Lost braces 70 | \item \code{prob.group}{ Matrix of predicted class probabilities. For each | ^ checkRd: (-1) classif.gkam.Rd:72: Lost braces 72 | \item \code{max.prob}{ Highest probability of correct classification.} | ^ checkRd: (-1) classif.glm.Rd:57: Lost braces 57 | \item \code{formula}{ formula.} | ^ checkRd: (-1) classif.glm.Rd:58: Lost braces 58 | \item \code{data}{ List that containing the variables in the model.} | ^ checkRd: (-1) classif.glm.Rd:59: Lost braces 59 | \item \code{group}{ Factor of length \emph{n}} | ^ checkRd: (-1) classif.glm.Rd:60: Lost braces 60 | \item \code{group.est}{ Estimated vector groups} | ^ checkRd: (-1) classif.glm.Rd:61: Lost braces 61 | \item \code{prob.classification}{ Probability of correct classification by group.} | ^ checkRd: (-1) classif.glm.Rd:62-63: Lost braces 62 | \item \code{prob.group}{ Matrix of predicted class probabilities. For each | ^ checkRd: (-1) classif.glm.Rd:64: Lost braces 64 | \item \code{max.prob}{ Highest probability of correct classification.} | ^ checkRd: (-1) classif.gsam.Rd:54: Lost braces 54 | \item \code{formula}{ formula.} | ^ checkRd: (-1) classif.gsam.Rd:55: Lost braces 55 | \item \code{data}{ List that containing the variables in the model.} | ^ checkRd: (-1) classif.gsam.Rd:56: Lost braces 56 | \item \code{group}{ Factor of length \emph{n}} | ^ checkRd: (-1) classif.gsam.Rd:57: Lost braces 57 | \item \code{group.est}{ Estimated vector groups} | ^ checkRd: (-1) classif.gsam.Rd:58: Lost braces 58 | \item \code{prob.classification}{ Probability of correct classification by group.} | ^ checkRd: (-1) classif.gsam.Rd:59-60: Lost braces 59 | \item \code{prob.group}{ Matrix of predicted class probabilities. For each | ^ checkRd: (-1) classif.gsam.Rd:61: Lost braces 61 | \item \code{max.prob}{ Highest probability of correct classification.} | ^ checkRd: (-1) classif.np.Rd:67: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.np.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.np.Rd:69: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.np.Rd:70-71: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.np.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.np.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.np.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.np.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.np.Rd:76-77: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.np.Rd:78: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) classif.np.Rd:79: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) cond.F.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) cond.F.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) cond.F.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) cond.F.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) cond.F.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) cond.F.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) cond.mode.Rd:21: Lost braces 21 | \item \code{mode.cond}{ Conditional mode.} | ^ checkRd: (-1) cond.mode.Rd:22: Lost braces 22 | \item \code{x}{ Grid of length \code{n} where the the conditional density function is evaluated.} | ^ checkRd: (-1) cond.mode.Rd:23: Lost braces 23 | \item \code{f}{ The conditional density function evaluated in \code{x}.} | ^ checkRd: (-1) create.fdata.basis.Rd:72: Lost braces 72 | \item \code{basis}{ basis} | ^ checkRd: (-1) create.fdata.basis.Rd:73: Lost braces 73 | \item \code{x}{ if \code{TRUE} the value of the rotated data (the centred data multiplied by the basis matrix) is returned} | ^ checkRd: (-1) create.fdata.basis.Rd:74: Lost braces 74 | \item \code{mean}{ functional mean of \code{fdataobj}} | ^ checkRd: (-1) create.fdata.basis.Rd:75: Lost braces 75 | \item \code{df}{ degree of freedom} | ^ checkRd: (-1) create.fdata.basis.Rd:76: Lost braces 76 | \item \code{type}{ type of basis} | ^ checkRd: (-1) dcor.xy.Rd:44: Lost braces 44 | \item \code{method}{ description of test} | ^ checkRd: (-1) dcor.xy.Rd:45: Lost braces 45 | \item \code{statistic}{ observed value of the test statistic} | ^ checkRd: (-1) dcor.xy.Rd:46: Lost braces 46 | \item \code{parameter}{ degrees of freedom} | ^ checkRd: (-1) dcor.xy.Rd:47: Lost braces 47 | \item \code{estimate}{ bias corrected distance correlation \code{bcdcor(x,y)}} | ^ checkRd: (-1) dcor.xy.Rd:48: Lost braces 48 | \item \code{p.value}{ p-value of the t-test} | ^ checkRd: (-1) dcor.xy.Rd:49: Lost braces 49 | \item \code{data.name}{ description of data} | ^ checkRd: (-1) dcor.xy.Rd:54: Lost braces 54 | \item \code{D1}{ the distance matrix of \code{x}} | ^ checkRd: (-1) dcor.xy.Rd:55: Lost braces 55 | \item \code{D2}{ the distance matrix of \code{y}} | ^ checkRd: (-1) depth.fdata.Rd:154: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.fdata.Rd:155: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.fdata.Rd:156: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.fdata.Rd:157: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.fdata.Rd:158: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.fdata.Rd:159: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.fdata.Rd:160: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.fdata.Rd:161: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mdata.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mdata.Rd:73-74: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mdata.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mdata.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mdata.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mdata.Rd:78: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mdata.Rd:79: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mfdata.Rd:102: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mfdata.Rd:103: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mfdata.Rd:104: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mfdata.Rd:105: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mfdata.Rd:106: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mfdata.Rd:107: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mfdata.Rd:108: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) depth.mfdata.Rd:190: Lost braces 190 | 10: 419{-}440. %Febrero-Bande, M., Oviedo de la Fuente, M. (2012). | ^ checkRd: (-1) dfv.test.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dfv.test.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dfv.test.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dfv.test.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dfv.test.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dfv.test.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dfv.test.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dfv.test.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dfv.test.Rd:62: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) dfv.test.Rd:63: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fEqDistrib.test.Rd:75: Lost braces 75 | \item {\code{XYRP.test}}:{ \code{FDR.pv}: p-value using FDR, \code{proj.pv}: Matrix of p-values obtained for projections.} | ^ checkRd: (-1) fEqDistrib.test.Rd:76: Lost braces 76 | \item {\code{MMD.test},\code{MMDA.test}}: {\code{stat}: Statistic, \code{p.value}: p-value, \code{thresh}: Threshold at level \code{alpha}.} | ^ checkRd: (-1) fEqDistrib.test.Rd:77-78: Lost braces 77 | \item {\code{fEqDistrib.test}}: { \code{result}: \code{data.frame} with columns \code{Stat} and \code{p.value}, | ^ checkRd: (-1) fEqMoments.test.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fEqMoments.test.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fEqMoments.test.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fEqMoments.test.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fEqMoments.test.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fanova.RPm.Rd:49: Lost braces 49 | \item{pr}{code{logical}. If \code{TRUE} prints intermediate results.} | ^ checkRd: (-1) fanova.RPm.Rd:66-68: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fanova.RPm.Rd:69-70: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fanova.RPm.Rd:71-72: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fanova.RPm.Rd:73-75: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fanova.RPm.Rd:76-77: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fanova.RPm.Rd:78-79: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fanova.RPm.Rd:80-81: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fanova.RPm.Rd:82-83: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fanova.RPm.Rd:84-85: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fanova.hetero.Rd:27-29: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fanova.hetero.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fanova.onefactor.Rd:34: Lost braces 34 | \item \code{stat}{ statistic value of test.} | ^ checkRd: (-1) fanova.onefactor.Rd:35: Lost braces 35 | \item \code{wm}{ statistic values of bootstrap resamples.} | ^ checkRd: (-1) fdata.bootstrap.Rd:44-45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata.bootstrap.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata.bootstrap.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata.bootstrap.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata.bootstrap.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2basis.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2basis.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2basis.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pc.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pc.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pc.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pc.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pc.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pc.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pc.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pc.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pc.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pls.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pls.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pls.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pls.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pls.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pls.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pls.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pls.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fdata2pls.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.Ftest.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.Ftest.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.Ftest.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.Ftest.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.Ftest.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.Ftest.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.test.Rd:90: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.test.Rd:91: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.test.Rd:92: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.test.Rd:93: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.test.Rd:94: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.test.Rd:95: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.test.Rd:96-97: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.test.Rd:98: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.test.Rd:99: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) flm.test.Rd💯 Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.cv.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.cv.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.cv.Rd:58-59: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.cv.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.cv.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.basis.fr.Rd:106: Lost braces 106 | linear differential operator; {\code{lambda.s},\code{Lfdobj.s}} for | ^ checkRd: (-1) fregre.basis.fr.Rd:108: Lost braces 108 | \cr {\code{lambda.t},\code{Lfdobj.t}} for penalization of | ^ checkRd: (-1) fregre.basis.fr.Rd:52: Lost braces 52 | \item \code{call}{ The matched call.} | ^ checkRd: (-1) fregre.basis.fr.Rd:53: Lost braces 53 | \item \code{a.est}{ Intercept parameter estimated.} | ^ checkRd: (-1) fregre.basis.fr.Rd:54: Lost braces 54 | \item \code{coefficientes}{ the matrix of the coefficients.} | ^ checkRd: (-1) fregre.basis.fr.Rd:55: Lost braces 55 | \item \code{beta.est}{ A bivariate functional data object of class \code{bifd} with the estimated parameters of \eqn{\beta(s,t)}{\beta(s,t)}.} | ^ checkRd: (-1) fregre.basis.fr.Rd:56: Lost braces 56 | \item \code{fitted.values}{ Estimated response.} | ^ checkRd: (-1) fregre.basis.fr.Rd:57: Lost braces 57 | \item \code{residuals}{ \code{y} minus \code{fitted values}.} | ^ checkRd: (-1) fregre.basis.fr.Rd:58: Lost braces 58 | \item \code{y}{ Functional response.} | ^ checkRd: (-1) fregre.basis.fr.Rd:59: Lost braces 59 | \item \code{x}{ Functional explanatory data.} | ^ checkRd: (-1) fregre.basis.fr.Rd:60: Lost braces 60 | \item \code{lambda.s}{ A roughness penalty with respect to \code{s} .} | ^ checkRd: (-1) fregre.basis.fr.Rd:61: Lost braces 61 | \item \code{lambda.t}{ A roughness penalty with respect to \code{t}.} | ^ checkRd: (-1) fregre.basis.fr.Rd:62: Lost braces 62 | \item \code{Lfdobj.s}{ A linear differential operator with respect to \code{s}.} | ^ checkRd: (-1) fregre.basis.fr.Rd:63: Lost braces 63 | \item \code{Lfdobj.t}{ A linear differential operator with respect to \code{t}.} | ^ checkRd: (-1) fregre.basis.fr.Rd:64: Lost braces 64 | \item \code{weights}{ Weights.} | ^ checkRd: (-1) fregre.bootstrap.Rd:59: Lost braces 59 | \item \code{model}{ \code{fregre.pc}, \code{fregre.pls} or \code{fregre.basis} object.} | ^ checkRd: (-1) fregre.bootstrap.Rd:60: Lost braces 60 | \item \code{beta.boot}{ functional beta estimated by the \code{nb} bootstrap regressions.} | ^ checkRd: (-1) fregre.bootstrap.Rd:61: Lost braces 61 | \item \code{norm.boot}{ norm of diferences beetween the nboot betas estimated by bootstrap and beta estimated by regression model.} | ^ checkRd: (-1) fregre.bootstrap.Rd:62: Lost braces 62 | \item \code{coefs.boot}{ matrix with the bootstrap estimated basis coefficients.} | ^ checkRd: (-1) fregre.bootstrap.Rd:63-64: Lost braces 63 | \item \code{kn.boot}{ vector or list of length \code{nb} with index of the basis, PC or PLS factors selected in each bootstrap | ^ checkRd: (-1) fregre.bootstrap.Rd:65: Lost braces 65 | \item \code{y.pred}{ predicted response values using \code{newX} covariates.} | ^ checkRd: (-1) fregre.bootstrap.Rd:66: Lost braces 66 | \item \code{y.boot}{ matrix of bootstrap predicted response values using \code{newX} covariates.} | ^ checkRd: (-1) fregre.bootstrap.Rd:67-68: Lost braces 67 | \item \code{newX}{ a \code{fdata} class containing the values of the model covariates at which predictions are required (only | ^ checkRd: (-1) fregre.gkam.Rd:52: Lost braces 52 | \item \code{result:}{ List of non-parametric estimation by covariate.} | ^ checkRd: (-1) fregre.gkam.Rd:53: Lost braces 53 | \item \code{fitted.values:}{ Estimated scalar response.} | ^ checkRd: (-1) fregre.gkam.Rd:54: Lost braces 54 | \item \code{residuals:}{ \code{y} minus \code{fitted values}.} | ^ checkRd: (-1) fregre.gkam.Rd:55: Lost braces 55 | \item \code{effects:}{ The residual degrees of freedom.} | ^ checkRd: (-1) fregre.gkam.Rd:56: Lost braces 56 | \item \code{alpha:}{ Hat matrix.} | ^ checkRd: (-1) fregre.gkam.Rd:57: Lost braces 57 | \item \code{family:}{ Coefficient of determination.} | ^ checkRd: (-1) fregre.gkam.Rd:58: Lost braces 58 | \item \code{linear.predictors:}{ Residual variance.} | ^ checkRd: (-1) fregre.gkam.Rd:59: Lost braces 59 | \item \code{deviance:}{ Scalar response.} | ^ checkRd: (-1) fregre.gkam.Rd:60: Lost braces 60 | \item \code{aic:}{ Functional explanatory data.} | ^ checkRd: (-1) fregre.gkam.Rd:61: Lost braces 61 | \item \code{null.deviance:}{ Non functional explanatory data.} | ^ checkRd: (-1) fregre.gkam.Rd:62: Lost braces; missing escapes or markup? 62 | \item \code{iter}:{ Distance matrix between curves.} | ^ checkRd: (-1) fregre.gkam.Rd:63: Lost braces 63 | \item \code{w:}{ beta coefficient estimated} | ^ checkRd: (-1) fregre.gkam.Rd:64: Lost braces 64 | \item \code{eqrank:}{ List that containing the variables in the model.} | ^ checkRd: (-1) fregre.gkam.Rd:65: Lost braces 65 | \item \code{prior.weights:}{ Asymmetric kernel used.} | ^ checkRd: (-1) fregre.gkam.Rd:66: Lost braces 66 | \item \code{y:}{ Scalar response.} | ^ checkRd: (-1) fregre.gkam.Rd:67: Lost braces 67 | \item \code{H:}{ Hat matrix, see Opsomer and Ruppert(1997) for more details.} | ^ checkRd: (-1) fregre.gkam.Rd:68: Lost braces 68 | \item \code{converged:}{ conv.} | ^ checkRd: (-1) fregre.glm.Rd:44: Lost braces 44 | \item \code{basis.x}{ Basis used for \code{fdata} or \code{fd} covariates.} | ^ checkRd: (-1) fregre.glm.Rd:45: Lost braces 45 | \item \code{basis.b}{ Basis used for beta parameter estimation.} | ^ checkRd: (-1) fregre.glm.Rd:46: Lost braces 46 | \item \code{beta.l}{ List of estimated beta parameter of functional covariates.} | ^ checkRd: (-1) fregre.glm.Rd:47: Lost braces 47 | \item \code{data}{ List that containing the variables in the model.} | ^ checkRd: (-1) fregre.glm.Rd:48: Lost braces 48 | \item \code{formula}{ formula.} | ^ checkRd: (-1) fregre.gls.Rd:88: Lost braces 88 | \item \code{sr2:}{ Residual variance.} | ^ checkRd: (-1) fregre.gls.Rd:89: Lost braces 89 | \item \code{Vp:}{ Estimated covariance matrix for the parameters.} | ^ checkRd: (-1) fregre.gls.Rd:90: Lost braces 90 | \item \code{lambda:}{ A roughness penalty.} | ^ checkRd: (-1) fregre.gls.Rd:91: Lost braces 91 | \item \code{basis.x:}{ Basis used for \code{fdata} or \code{fd} covariates.} | ^ checkRd: (-1) fregre.gls.Rd:92: Lost braces 92 | \item \code{basis.b:}{ Basis used for beta parameter estimation.} | ^ checkRd: (-1) fregre.gls.Rd:93: Lost braces 93 | \item \code{beta.l:}{ List of estimated beta parameter of functional covariates.} | ^ checkRd: (-1) fregre.gls.Rd:94: Lost braces 94 | \item \code{data:}{ List that containing the variables in the model.} | ^ checkRd: (-1) fregre.gls.Rd:95: Lost braces 95 | \item \code{formula:}{ formula used in ajusted model.} | ^ checkRd: (-1) fregre.gls.Rd:96: Lost braces 96 | \item \code{formula.ini:}{ formula in call.} | ^ checkRd: (-1) fregre.gls.Rd:97: Lost braces 97 | \item \code{W:}{ inverse of covariance matrix} | ^ checkRd: (-1) fregre.gls.Rd:98: Lost braces 98 | \item \code{correlation:}{ See glsObject for the components of the fit. } | ^ checkRd: (-1) fregre.gsam.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.gsam.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.gsam.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.gsam.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.gsam.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.igls.Rd:62: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.lm.Rd:43: Lost braces 43 | \item \code{sr2}{ Residual variance.} | ^ checkRd: (-1) fregre.lm.Rd:44: Lost braces 44 | \item \code{Vp}{ Estimated covariance matrix for the parameters.} | ^ checkRd: (-1) fregre.lm.Rd:45: Lost braces 45 | \item \code{lambda}{ A roughness penalty.} | ^ checkRd: (-1) fregre.lm.Rd:46: Lost braces 46 | \item \code{basis.x}{ Basis used for \code{fdata} or \code{fd} covariates.} | ^ checkRd: (-1) fregre.lm.Rd:47: Lost braces 47 | \item \code{basis.b}{ Basis used for beta parameter estimation.} | ^ checkRd: (-1) fregre.lm.Rd:48: Lost braces 48 | \item \code{beta.l}{ List of estimated beta parameter of functional covariates.} | ^ checkRd: (-1) fregre.lm.Rd:49: Lost braces 49 | \item \code{data}{ List that containing the variables in the model.} | ^ checkRd: (-1) fregre.lm.Rd:50: Lost braces 50 | \item \code{formula}{ formula.} | ^ checkRd: (-1) fregre.np.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.np.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.np.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.np.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.np.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.np.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.np.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.np.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.np.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.np.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.np.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.np.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) fregre.np.cv.Rd:52: Lost braces 52 | \item \code{call}{ The matched call.} | ^ checkRd: (-1) fregre.np.cv.Rd:53: Lost braces 53 | \item \code{residuals}{ \code{y} minus \code{fitted values}.} | ^ checkRd: (-1) fregre.np.cv.Rd:54: Lost braces 54 | \item \code{fitted.values}{ Estimated scalar response.} | ^ checkRd: (-1) fregre.np.cv.Rd:55: Lost braces 55 | \item \code{df.residual}{ The residual degrees of freedom.} | ^ checkRd: (-1) fregre.np.cv.Rd:56: Lost braces 56 | \item \code{r2}{ Coefficient of determination.} | ^ checkRd: (-1) fregre.np.cv.Rd:57: Lost braces 57 | \item \code{sr2}{ Residual variance.} | ^ checkRd: (-1) fregre.np.cv.Rd:58: Lost braces 58 | \item \code{H}{ Hat matrix.} | ^ checkRd: (-1) fregre.np.cv.Rd:59: Lost braces 59 | \item \code{y}{ Response.} | ^ checkRd: (-1) fregre.np.cv.Rd:60: Lost braces 60 | \item \code{fdataobj}{ Functional explanatory data.} | ^ checkRd: (-1) fregre.np.cv.Rd:61: Lost braces 61 | \item \code{mdist}{ Distance matrix between \code{x} and \code{newx}.} | ^ checkRd: (-1) fregre.np.cv.Rd:62: Lost braces 62 | \item \code{Ker}{ Asymmetric kernel used.} | ^ checkRd: (-1) fregre.np.cv.Rd:63: Lost braces 63 | \item \code{gcv}{ CV or GCV values.} | ^ checkRd: (-1) fregre.np.cv.Rd:64: Lost braces 64 | \item \code{h.opt}{ smoothing parameter or bandwidth that minimizes CV or GCV method.} | ^ checkRd: (-1) fregre.np.cv.Rd:65: Lost braces 65 | \item \code{h}{ Vector of smoothing parameter or bandwidth.} | ^ checkRd: (-1) fregre.np.cv.Rd:66: Lost braces 66 | \item \code{cv}{ List with the fitted values and residuals estimated by CV, without the same curve.} | ^ checkRd: (-1) fregre.pc.Rd:41: Lost braces 41 | \item \code{call}{ The matched call of \code{\link{fregre.pc}} function.} | ^ checkRd: (-1) fregre.pc.Rd:42: Lost braces 42 | \item \code{coefficients}{ A named vector of coefficients.} | ^ checkRd: (-1) fregre.pc.Rd:43: Lost braces 43 | \item \code{residuals}{ \code{y}-\code{fitted values}.} | ^ checkRd: (-1) fregre.pc.Rd:44: Lost braces 44 | \item \code{fitted.values}{ Estimated scalar response.} | ^ checkRd: (-1) fregre.pc.Rd:45: Lost braces 45 | \item \code{beta.est}{ beta coefficient estimated of class \code{fdata}} | ^ checkRd: (-1) fregre.pc.Rd:46: Lost braces 46 | \item \code{df.residual}{ The residual degrees of freedom. In ridge regression, \code{df(rn)} is the effective degrees of freedom.} | ^ checkRd: (-1) fregre.pc.Rd:47: Lost braces 47 | \item \code{r2}{ Coefficient of determination.} | ^ checkRd: (-1) fregre.pc.Rd:48: Lost braces 48 | \item \code{sr2}{ Residual variance.} | ^ checkRd: (-1) fregre.pc.Rd:49: Lost braces 49 | \item \code{Vp}{ Estimated covariance matrix for the parameters.} | ^ checkRd: (-1) fregre.pc.Rd:50: Lost braces 50 | \item \code{H}{ Hat matrix.} | ^ checkRd: (-1) fregre.pc.Rd:51: Lost braces 51 | \item \code{l}{ Index of principal components selected.} | ^ checkRd: (-1) fregre.pc.Rd:52: Lost braces 52 | \item \code{lambda}{ Amount of shrinkage.} | ^ checkRd: (-1) fregre.pc.Rd:53: Lost braces 53 | \item \code{P}{ Penalty matrix.} | ^ checkRd: (-1) fregre.pc.Rd:54: Lost braces 54 | \item \code{fdata.comp}{ Fitted object in \code{\link{fdata2pc}} function.} | ^ checkRd: (-1) fregre.pc.Rd:55: Lost braces 55 | \item \code{lm}{ \code{lm} object.} | ^ checkRd: (-1) fregre.pc.Rd:56: Lost braces 56 | \item \code{fdataobj}{ Functional explanatory data.} | ^ checkRd: (-1) fregre.pc.Rd:57: Lost braces 57 | \item \code{y}{ Scalar response.} | ^ checkRd: (-1) fregre.pc.cv.Rd:47: Lost braces 47 | \item \code{fregre.pc}{ Fitted regression object by the best (\code{pc.opt}) components.} | ^ checkRd: (-1) fregre.pc.cv.Rd:48: Lost braces 48 | \item \code{pc.opt}{ Index of PC components selected.} | ^ checkRd: (-1) fregre.pc.cv.Rd:49: Lost braces 49 | \item \code{MSC.min}{ Minimum Model Selection Criteria (MSC) value for the (\code{pc.opt} components.} | ^ checkRd: (-1) fregre.pc.cv.Rd:50: Lost braces 50 | \item \code{MSC}{ Minimum Model Selection Criteria (MSC) value for \code{kmax} components.} | ^ checkRd: (-1) fregre.plm.Rd:51: Lost braces 51 | \item \code{call}{ The matched call.} | ^ checkRd: (-1) fregre.plm.Rd:52: Lost braces 52 | \item \code{fitted.values}{ Estimated scalar response.} | ^ checkRd: (-1) fregre.plm.Rd:53: Lost braces 53 | \item \code{residuals}{ \code{y} minus \code{fitted values}.} | ^ checkRd: (-1) fregre.plm.Rd:54: Lost braces 54 | \item \code{df.residual}{ The residual degrees of freedom.} | ^ checkRd: (-1) fregre.plm.Rd:55: Lost braces 55 | \item \code{H}{ Hat matrix.} | ^ checkRd: (-1) fregre.plm.Rd:56: Lost braces 56 | \item \code{r2}{ Coefficient of determination.} | ^ checkRd: (-1) fregre.plm.Rd:57: Lost braces 57 | \item \code{sr2}{ Residual variance.} | ^ checkRd: (-1) fregre.plm.Rd:58: Lost braces 58 | \item \code{y}{ Scalar response.} | ^ checkRd: (-1) fregre.plm.Rd:59: Lost braces 59 | \item \code{fdataobj}{ Functional explanatory data.} | ^ checkRd: (-1) fregre.plm.Rd:60: Lost braces 60 | \item \code{XX}{ Non functional explanatory data.} | ^ checkRd: (-1) fregre.plm.Rd:61: Lost braces 61 | \item \code{mdist}{ Distance matrix between curves.} | ^ checkRd: (-1) fregre.plm.Rd:62: Lost braces 62 | \item \code{betah}{ beta coefficient estimated} | ^ checkRd: (-1) fregre.plm.Rd:63: Lost braces 63 | \item \code{data}{ List that containing the variables in the model.} | ^ checkRd: (-1) fregre.plm.Rd:64: Lost braces 64 | \item \code{Ker}{ Asymmetric kernel used.} | ^ checkRd: (-1) fregre.plm.Rd:65: Lost braces 65 | \item \code{h.opt}{ Value that minimizes CV or GCV method.} | ^ checkRd: (-1) fregre.plm.Rd:66: Lost braces 66 | \item \code{h}{ Smoothing parameter or bandwidth.} | ^ checkRd: (-1) fregre.plm.Rd:67-68: Lost braces 67 | \item \code{data}{ List that containing the | ^ checkRd: (-1) fregre.plm.Rd:69: Lost braces 69 | \item \code{gcv}{ GCV values.} | ^ checkRd: (-1) fregre.plm.Rd:70: Lost braces 70 | \item \code{formula}{ formula.} | ^ checkRd: (-1) fregre.pls.Rd:29: Lost braces 29 | \item \code{call}{ The matched call of \code{\link{fregre.pls}} function.} | ^ checkRd: (-1) fregre.pls.Rd:30: Lost braces 30 | \item \code{beta.est}{ Beta coefficient estimated of class \code{fdata}.} | ^ checkRd: (-1) fregre.pls.Rd:31: Lost braces 31 | \item \code{coefficients}{ A named vector of coefficients.} | ^ checkRd: (-1) fregre.pls.Rd:32: Lost braces 32 | \item \code{fitted.values}{ Estimated scalar response.} | ^ checkRd: (-1) fregre.pls.Rd:33: Lost braces 33 | \item \code{residuals}{\code{y}-\code{fitted values}.} | ^ checkRd: (-1) fregre.pls.Rd:34: Lost braces 34 | \item \code{H}{ Hat matrix.} | ^ checkRd: (-1) fregre.pls.Rd:35: Lost braces 35 | \item \code{df.residual}{ The residual degrees of freedom.} | ^ checkRd: (-1) fregre.pls.Rd:36: Lost braces 36 | \item \code{r2}{ Coefficient of determination.} | ^ checkRd: (-1) fregre.pls.Rd:37: Lost braces 37 | \item \code{GCV}{ GCV criterion.} | ^ checkRd: (-1) fregre.pls.Rd:38: Lost braces 38 | \item \code{sr2}{ Residual variance.} | ^ checkRd: (-1) fregre.pls.Rd:39: Lost braces 39 | \item \code{l}{ Index of components to include in the model.} | ^ checkRd: (-1) fregre.pls.Rd:40: Lost braces 40 | \item \code{lambda}{ Amount of shrinkage.} | ^ checkRd: (-1) fregre.pls.Rd:41: Lost braces 41 | \item \code{fdata.comp}{ Fitted object in \code{\link{fdata2pls}} function.} | ^ checkRd: (-1) fregre.pls.Rd:42: Lost braces 42 | \item \code{lm}{ Fitted object in \code{\link{lm}} function} | ^ checkRd: (-1) fregre.pls.Rd:43: Lost braces 43 | \item \code{fdataobj}{ Functional explanatory data.} | ^ checkRd: (-1) fregre.pls.Rd:44: Lost braces 44 | \item \code{y}{ Scalar response.} | ^ checkRd: (-1) fregre.pls.cv.Rd:42: Lost braces 42 | \item \code{fregre.pls}{ Fitted regression object by the best (\code{pls.opt}) components.} | ^ checkRd: (-1) fregre.pls.cv.Rd:43: Lost braces 43 | \item \code{pls.opt}{ Index of PLS components' selected.} | ^ checkRd: (-1) fregre.pls.cv.Rd:44-45: Lost braces 44 | \item \code{MSC.min}{ Minimum Model Selection Criteria (MSC) value for | ^ checkRd: (-1) fregre.pls.cv.Rd:46: Lost braces 46 | \item \code{MSC}{ Minimum Model Selection Criteria (MSC) value for \code{kmax} components.} | ^ checkRd: (-1) influence.fregre.fd.Rd:17: Lost braces 17 | \item \code{DCP}{ Cook's Distance for Prediction.} | ^ checkRd: (-1) influence.fregre.fd.Rd🔞 Lost braces 18 | \item \code{DCE}{ Cook's Distance for Estimation.} | ^ checkRd: (-1) influence.fregre.fd.Rd:19: Lost braces 19 | \item \code{DP}{ \eqn{\mbox{Pe}\tilde{\mbox{n}}\mbox{a's} }{} Distance.} | ^ checkRd: (-1) influence_quan.Rd:33: Lost braces 33 | \item \code{quan.cook.for}{ Distance Cook Prediction Quantile.} | ^ checkRd: (-1) influence_quan.Rd:34: Lost braces 34 | \item \code{quan.cook.est}{ Distance Cook Estimation Quantile.} | ^ checkRd: (-1) influence_quan.Rd:35: Lost braces 35 | \item \code{quan.cook.Pena}{ Pena Distance Quantile.} | ^ checkRd: (-1) influence_quan.Rd:36: Lost braces 36 | \item \code{mues.est}{ Sample Cook generated.} | ^ checkRd: (-1) influence_quan.Rd:37: Lost braces 37 | \item \code{mues.pena}{ Sample Pena generated.} | ^ checkRd: (-1) influence_quan.Rd:38: Lost braces 38 | \item \code{beta.boot}{ Functional beta estimated by bootstrap method.} | ^ checkRd: (-1) kmeans.fd.Rd:69: Lost braces 69 | \item \code{cluster}{ Indexes of groups assigned.} | ^ checkRd: (-1) kmeans.fd.Rd:70: Lost braces 70 | \item \code{centers}{ Curves centers.} | ^ checkRd: (-1) optim.basis.Rd:46: Lost braces 46 | \item \code{gcv}{ Returns GCV values calculated for input parameters.} | ^ checkRd: (-1) optim.basis.Rd:47-49: Lost braces 47 | \item \code{fdataobj}{ Matrix of set cases with dimension (\code{n} x \code{m}), | ^ checkRd: (-1) optim.basis.Rd:50: Lost braces 50 | \item \code{fdata.est}{ Estimated \code{fdata} class object.} | ^ checkRd: (-1) optim.basis.Rd:51: Lost braces 51 | \item \code{numbasis.opt}{ \code{numbasis} value that minimizes CV or GCV method.} | ^ checkRd: (-1) optim.basis.Rd:52: Lost braces 52 | \item \code{lambda.opt}{ \code{lambda} value that minimizes CV or GCV method.} | ^ checkRd: (-1) optim.basis.Rd:53: Lost braces 53 | \item \code{basis.opt}{ \code{basis} for the minimum CV or GCV method.} | ^ checkRd: (-1) optim.basis.Rd:54: Lost braces 54 | \item \code{S.opt}{ Smoothing matrix for the minimum CV or GCV method.} | ^ checkRd: (-1) optim.basis.Rd:55: Lost braces 55 | \item \code{gcv.opt}{ Minimum of CV or GCV method.} | ^ checkRd: (-1) optim.basis.Rd:56: Lost braces 56 | \item \code{lambda}{ A roughness penalty. By default, no penalty \code{lambda=0}.} | ^ checkRd: (-1) optim.basis.Rd:57: Lost braces 57 | \item \code{numbasis}{ Number of basis to use.} | ^ checkRd: (-1) optim.basis.Rd:58-59: Lost braces 58 | \item \code{verbose}{ If \code{TRUE} information about GCV values | ^ checkRd: (-1) optim.np.Rd:59-60: Lost braces 59 | \item \code{gcv}{ GCV or CV for a vector of values of the smoothing parameter | ^ checkRd: (-1) optim.np.Rd:61: Lost braces 61 | \item \code{fdataobj}{ \code{\link{fdata}} class object.} | ^ checkRd: (-1) optim.np.Rd:62: Lost braces 62 | \item \code{fdata.est}{ Estimated \code{fdata} class object.} | ^ checkRd: (-1) optim.np.Rd:63: Lost braces 63 | \item \code{h.opt}{ \code{h} value that minimizes CV or GCV method.} | ^ checkRd: (-1) optim.np.Rd:64: Lost braces 64 | \item \code{S.opt}{ Smoothing matrix for the minimum CV or GCV method.} | ^ checkRd: (-1) optim.np.Rd:65: Lost braces 65 | \item \code{gcv.opt}{ Minimum of CV or GCV method.} | ^ checkRd: (-1) optim.np.Rd:66: Lost braces 66 | \item \code{h}{ Smoothing parameter or bandwidth.} | ^ checkRd: (-1) predict.classif.DD.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) predict.classif.DD.Rd:23-24: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) predict.fregre.fd.Rd:51: Lost braces 51 | \item \code{fit}{ A vector of predictions or a matrix of predictions and bounds as above} | ^ checkRd: (-1) predict.fregre.fd.Rd:52: Lost braces 52 | \item \code{se.fit}{ Associated standard error estimates of predictions} | ^ checkRd: (-1) predict.fregre.fd.Rd:53: Lost braces 53 | \item \code{residual.scale}{ Residual standard deviations} | ^ checkRd: (-1) predict.fregre.fd.Rd:54: Lost braces 54 | \item \code{df}{ Degrees of freedom for residual} | ^ checkRd: (-1) predict.fregre.lm.Rd:68-71: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) predict.fregre.lm.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) predict.fregre.lm.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) predict.fregre.lm.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.statistic.Rd:30-31: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.statistic.Rd:32-34: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd:46-47: Lost braces in \itemize; meant \describe ? checkRd: (-1) rp.flm.test.Rd:48-49: Lost braces in \itemize; meant \describe ? checkRd: (-1) rp.flm.test.Rd:50-53: Lost braces in \itemize; meant \describe ? checkRd: (-1) rp.flm.test.Rd:88-89: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd:90-91: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd:92-93: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd:94: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd:95-96: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd:97: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd:98: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd:99: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd💯 Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd:101-102: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd:103: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd:104: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) rp.flm.test.Rd:105: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) summary.fregre.fd.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) summary.fregre.fd.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) summary.fregre.fd.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
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• checking for missing documentation entries ... OK
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• checking Rd \usage sections ... OK
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• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... NOTE Note: found 76 marked UTF-8 strings
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking usage of KIND in Fortran files ... OK
• checking examples ... OK
• checking PDF version of manual ... [27s/33s] OK
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• checking for non-standard things in the check directory ... OK
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• DONE

Status: 3 NOTEs